colitis Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
Description An inflammatory bowel disease that involves inflammation located_in colon. (Human Disease Ontology, DOID_0060180)
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:0060180
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Genes

53 genes associated with the disease colitis in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
IL1RL1 interleukin 1 receptor-like 1 3.00967
CCHCR1 coiled-coil alpha-helical rod protein 1 2.73927
IL18RAP interleukin 18 receptor accessory protein 2.42027
IL18R1 interleukin 18 receptor 1 2.36124
SLC9A4 solute carrier family 9, subfamily A (NHE4, cation proton antiporter 4), member 4 2.34245
IL23R interleukin 23 receptor 2.22234
SLC9A2 solute carrier family 9, subfamily A (NHE2, cation proton antiporter 2), member 2 2.07725
OTUD3 OTU deubiquitinase 3 2.06234
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 2.01898
IL1R1 interleukin 1 receptor, type I 1.99917
CARD9 caspase recruitment domain family, member 9 1.97455
IL1RL2 interleukin 1 receptor-like 2 1.91983
NR5A2 nuclear receptor subfamily 5, group A, member 2 1.90896
APEH acylaminoacyl-peptide hydrolase 1.90896
GNA12 guanine nucleotide binding protein (G protein) alpha 12 1.89195
PUS10 pseudouridylate synthase 10 1.77455
C1ORF106 chromosome 1 open reading frame 106 1.7256
IL10 interleukin 10 1.69467
TTL tubulin tyrosine ligase 1.6622
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 1.6622
DAP death-associated protein 1.65151
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 1.65151
LSP1 lymphocyte-specific protein 1 1.57556
RTEL1 regulator of telomere elongation helicase 1 1.55738
CCNY cyclin Y 1.52067
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 1.48714
GPR35 G protein-coupled receptor 35 1.48714
MST1 macrophage stimulating 1 1.46277
PARK7 parkinson protein 7 1.45471
BSN bassoon presynaptic cytomatrix protein 1.44134
NKX2-3 NK2 homeobox 3 1.42467
SFMBT1 Scm-like with four mbt domains 1 1.42467
MAML2 mastermind-like 2 (Drosophila) 1.42467
GSDMB gasdermin B 1.37327
TCF4 transcription factor 4 1.37327
ZFP90 ZFP90 zinc finger protein 1.37327
PLCL1 phospholipase C-like 1 1.37327
IL17REL interleukin 17 receptor E-like 1.35834
IL7R interleukin 7 receptor 1.35834
DENND1B DENN/MADD domain containing 1B 1.28906
IL26 interleukin 26 1.24194
ADAD1 adenosine deaminase domain containing 1 (testis-specific) 1.20161
UBE2L3 ubiquitin-conjugating enzyme E2L 3 1.19504
HDAC9 histone deacetylase 9 1.14463
CIITA class II, major histocompatibility complex, transactivator 1.10764
BTNL2 butyrophilin-like 2 1.10764
SATB2 SATB homeobox 2 1.04846
LAMB1 laminin, beta 1 1.00407
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.986376
FOS FBJ murine osteosarcoma viral oncogene homolog 0.937304
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific) 0.856323
DSCAM Down syndrome cell adhesion molecule 0.831981
ESRRG estrogen-related receptor gamma 0.800256