clathrin-coated vesicle Gene Set

Dataset COMPARTMENTS Curated Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A vesicle with a coat formed of clathrin connected to the membrane via one of the clathrin adaptor complexes. (Gene Ontology, GO_0030136)
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Genes

206 proteins localized to the clathrin-coated vesicle cellular component from the COMPARTMENTS Curated Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
CLN3 ceroid-lipofuscinosis, neuronal 3 0.663342
AP1M1 adaptor-related protein complex 1, mu 1 subunit 0.663342
TNK2 tyrosine kinase, non-receptor, 2 0.663342
RAB14 RAB14, member RAS oncogene family 0.663342
SNX9 sorting nexin 9 0.663342
CLTCL1 clathrin, heavy chain-like 1 0.663342
FAM109A family with sequence similarity 109, member A 0.663342
FAM109B family with sequence similarity 109, member B 0.663342
SEPT5 septin 5 0.663342
TMED9 transmembrane emp24 protein transport domain containing 9 0.663342
FURIN furin (paired basic amino acid cleaving enzyme) 0.663342
WIPI1 WD repeat domain, phosphoinositide interacting 1 0.663342
FCHO2 FCH domain only 2 0.663342
NCALD neurocalcin delta 0.663342
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.663342
DENND1A DENN/MADD domain containing 1A 0.663342
CEMIP cell migration inducing protein, hyaluronan binding 0.663342
COPS5 COP9 signalosome subunit 5 0.663342
AP1M2 adaptor-related protein complex 1, mu 2 subunit 0.663342
TYRP1 tyrosinase-related protein 1 0.663342
NUMB numb homolog (Drosophila) 0.663342
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha 0.663342
GOPC golgi-associated PDZ and coiled-coil motif containing 0.663342
STEAP2 STEAP family member 2, metalloreductase 0.663342
AFTPH aftiphilin 0.663342
RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9 0.663342
HIP1 huntingtin interacting protein 1 0.663342
STX6 syntaxin 6 0.663342
DTNBP1 dystrobrevin binding protein 1 0.663342
TOR1A torsin family 1, member A (torsin A) 0.663342
OCRL oculocerebrorenal syndrome of Lowe 0.663342
AP2S1 adaptor-related protein complex 2, sigma 1 subunit 0.663342
AP2A1 adaptor-related protein complex 2, alpha 1 subunit 0.663342
VAMP3 vesicle-associated membrane protein 3 0.663342
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 0.663342
GABRA2 gamma-aminobutyric acid (GABA) A receptor, alpha 2 0.663342
SYN3 synapsin III 0.663342
COPS4 COP9 signalosome subunit 4 0.663342
SNAPIN SNAP-associated protein 0.663342
RAB27B RAB27B, member RAS oncogene family 0.663342
CLINT1 clathrin interactor 1 0.663342
PPT1 palmitoyl-protein thioesterase 1 0.663342
SYP synaptophysin 0.663342
DMXL2 Dmx-like 2 0.663342
MYO6 myosin VI 0.663342
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2 0.663342
SLC2A4 solute carrier family 2 (facilitated glucose transporter), member 4 0.663342
PICALM phosphatidylinositol binding clathrin assembly protein 0.663342
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.663342
AP1G2 adaptor-related protein complex 1, gamma 2 subunit 0.663342
RAB35 RAB35, member RAS oncogene family 0.663342
HIP1R huntingtin interacting protein 1 related 0.663342
SLC17A5 solute carrier family 17 (acidic sugar transporter), member 5 0.663342
SYT4 synaptotagmin IV 0.663342
AP2M1 adaptor-related protein complex 2, mu 1 subunit 0.663342
SYT1 synaptotagmin I 0.663342
AMPH amphiphysin 0.663342
VWF von Willebrand factor 0.663342
AP1B1 adaptor-related protein complex 1, beta 1 subunit 0.663342
CLTC clathrin, heavy chain (Hc) 0.663342
SPG21 spastic paraplegia 21 (autosomal recessive, Mast syndrome) 0.663342
AP1S1 adaptor-related protein complex 1, sigma 1 subunit 0.663342
SCYL2 SCY1-like 2 (S. cerevisiae) 0.663342
IGF2R insulin-like growth factor 2 receptor 0.663342
SGIP1 SH3-domain GRB2-like (endophilin) interacting protein 1 0.237908
SYNGR3 synaptogyrin 3 0.237908
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.237908
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.237908
HLA-DRB4 major histocompatibility complex, class II, DR beta 4 0.237908
HLA-DRB3 major histocompatibility complex, class II, DR beta 3 0.237908
TMED10 transmembrane emp24-like trafficking protein 10 (yeast) 0.237908
OTOF otoferlin 0.237908
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C 0.237908
GAD1 glutamate decarboxylase 1 (brain, 67kDa) 0.237908
RPH3A rabphilin 3A 0.237908
MT3 metallothionein 3 0.237908
CLVS2 clavesin 2 0.237908
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1 0.237908
SH3GL2 SH3-domain GRB2-like 2 0.237908
HLA-DRB5 major histocompatibility complex, class II, DR beta 5 0.237908
APOB apolipoprotein B 0.237908
NECAP2 NECAP endocytosis associated 2 0.237908
FCGR1B Fc fragment of IgG, high affinity Ib, receptor (CD64) 0.237908
FCGR1A Fc fragment of IgG, high affinity Ia, receptor (CD64) 0.237908
HLA-DRA major histocompatibility complex, class II, DR alpha 0.237908
MALL mal, T-cell differentiation protein-like 0.237908
DNAJC5 DnaJ (Hsp40) homolog, subfamily C, member 5 0.237908
SORT1 sortilin 1 0.237908
CLTA clathrin, light chain A 0.237908
ICA1 islet cell autoantigen 1, 69kDa 0.237908
BRSK1 BR serine/threonine kinase 1 0.237908
CD207 CD207 molecule, langerin 0.237908
CLVS1 clavesin 1 0.237908
TPRG1L tumor protein p63 regulated 1-like 0.237908
CD74 CD74 molecule, major histocompatibility complex, class II invariant chain 0.237908
HSPA8 heat shock 70kDa protein 8 0.237908
RAB11B RAB11B, member RAS oncogene family 0.237908
SLC30A3 solute carrier family 30 (zinc transporter), member 3 0.237908
HLA-DPB1 major histocompatibility complex, class II, DP beta 1 0.237908
RAB3A RAB3A, member RAS oncogene family 0.237908
SYT11 synaptotagmin XI 0.237908
AAK1 AP2 associated kinase 1 0.237908
WNT5A wingless-type MMTV integration site family, member 5A 0.237908
CTLA4 cytotoxic T-lymphocyte-associated protein 4 0.237908
ROR2 receptor tyrosine kinase-like orphan receptor 2 0.237908
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.237908
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.237908
ECE1 endothelin converting enzyme 1 0.237908
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.237908
APBA1 amyloid beta (A4) precursor protein-binding, family A, member 1 0.237908
LDLR low density lipoprotein receptor 0.237908
DVL2 dishevelled segment polarity protein 2 0.237908
AP2A2 adaptor-related protein complex 2, alpha 2 subunit 0.237908
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.237908
GRIN1 glutamate receptor, ionotropic, N-methyl D-aspartate 1 0.237908
HCRT hypocretin (orexin) neuropeptide precursor 0.237908
SV2A synaptic vesicle glycoprotein 2A 0.237908
HLA-DQA2 major histocompatibility complex, class II, DQ alpha 2 0.237908
SV2C synaptic vesicle glycoprotein 2C 0.237908
SYN1 synapsin I 0.237908
SV2B synaptic vesicle glycoprotein 2B 0.237908
SLC18A1 solute carrier family 18 (vesicular monoamine transporter), member 1 0.237908
SLC18A2 solute carrier family 18 (vesicular monoamine transporter), member 2 0.237908
MME membrane metallo-endopeptidase 0.237908
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 0.237908
HLA-DQB2 major histocompatibility complex, class II, DQ beta 2 0.237908
SNCAIP synuclein, alpha interacting protein 0.237908
EPN3 epsin 3 0.237908
HLA-DQB3 major histocompatibility complex, class II, DQ beta 3 0.237908
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.237908
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 0.237908
SYNRG synergin, gamma 0.237908
FZD2 frizzled class receptor 2 0.237908
TMEM163 transmembrane protein 163 0.237908
SLC6A17 solute carrier family 6 (neutral amino acid transporter), member 17 0.237908
FZD5 frizzled class receptor 5 0.237908
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 0.237908
TRAPPC4 trafficking protein particle complex 4 0.237908
FZD4 frizzled class receptor 4 0.237908
RAB5A RAB5A, member RAS oncogene family 0.098109
MTMR2 myotubularin related protein 2 0.098109
ATP7A ATPase, Cu++ transporting, alpha polypeptide 0.098109
VTI1A vesicle transport through interaction with t-SNAREs 1A 0.098109
SVOP SV2 related protein homolog (rat) 0.098109
GIPC1 GIPC PDZ domain containing family, member 1 0.098109
VTI1B vesicle transport through interaction with t-SNAREs 1B 0.098109
DVL1 dishevelled segment polarity protein 1 0.098109
SYNPR synaptoporin 0.098109
DLG4 discs, large homolog 4 (Drosophila) 0.098109
SYPL1 synaptophysin-like 1 0.098109
SYPL2 synaptophysin-like 2 0.098109
SCAMP1 secretory carrier membrane protein 1 0.098109
SYT5 synaptotagmin V 0.03318
PI4K2A phosphatidylinositol 4-kinase type 2 alpha 0.03318
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 0.03318
TRIM9 tripartite motif containing 9 0.03318
STX1A syntaxin 1A (brain) 0.03318
CADM1 cell adhesion molecule 1 0.03318
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.03318
RAB3B RAB3B, member RAS oncogene family 0.03318
RAB3C RAB3C, member RAS oncogene family 0.03318
SYT7 synaptotagmin VII 0.03318
SYT10 synaptotagmin X 0.03318
SYT3 synaptotagmin III 0.03318
SYT17 synaptotagmin XVII 0.03318
SYT2 synaptotagmin II 0.03318
SYT6 synaptotagmin VI 0.03318
SNCA synuclein, alpha (non A4 component of amyloid precursor) 0.03318
SYT9 synaptotagmin IX 0.03318
SYT8 synaptotagmin VIII 0.03318
SEPT6 septin 6 0.03318
SYNGR2 synaptogyrin 2 0.03318
TH tyrosine hydroxylase 0.03318
SLC40A1 solute carrier family 40 (iron-regulated transporter), member 1 0.03318
DOC2A double C2-like domains, alpha 0.03318
DOC2B double C2-like domains, beta 0.03318
CDK16 cyclin-dependent kinase 16 0.03318
LMBRD1 LMBR1 domain containing 1 0.03318
GRIN2A glutamate receptor, ionotropic, N-methyl D-aspartate 2A 0.03318
GRIN2B glutamate receptor, ionotropic, N-methyl D-aspartate 2B 0.03318
SPHK1 sphingosine kinase 1 0.03318
BDNF brain-derived neurotrophic factor 0.03318
CACFD1 calcium channel flower domain containing 1 0.03318
RAB8B RAB8B, member RAS oncogene family 0.03318
RAB8A RAB8A, member RAS oncogene family 0.03318
EPN2 epsin 2 0.03318
SYTL4 synaptotagmin-like 4 0.03318
ATP6V0D1 ATPase, H+ transporting, lysosomal 38kDa, V0 subunit d1 0.03318
LGI3 leucine-rich repeat LGI family, member 3 0.03318
NECAP1 NECAP endocytosis associated 1 0.03318
RGS19 regulator of G-protein signaling 19 0.03318
CLTB clathrin, light chain B 0.03318
LRRK2 leucine-rich repeat kinase 2 0.03318
PCLO piccolo presynaptic cytomatrix protein 0.03318
DRD2 dopamine receptor D2 0.03318
KIF3A kinesin family member 3A 0.03318
SYNGR1 synaptogyrin 1 0.03318
AQP2 aquaporin 2 (collecting duct) 0.03318
SYN2 synapsin II 0.03318
STON2 stonin 2 0.03318
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.03318
GRIA2 glutamate receptor, ionotropic, AMPA 2 0.03318
CTTNBP2 cortactin binding protein 2 0.03318
KCNK9 potassium channel, two pore domain subfamily K, member 9 0.03318
BIN1 bridging integrator 1 0.03318
EPS15 epidermal growth factor receptor pathway substrate 15 0.03318