clathrin-coated vesicle membrane Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The lipid bilayer surrounding a clathrin-coated vesicle. (Gene Ontology, GO_0030665)
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Genes

256 proteins co-occuring with the clathrin-coated vesicle membrane cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
MYO1G myosin IG 2.09327
AKAP13 A kinase (PRKA) anchor protein 13 1.99333
HMHA1 histocompatibility (minor) HA-1 1.95232
HAS1 hyaluronan synthase 1 1.7432
KRT38 keratin 38, type I 1.4904
HLA-A major histocompatibility complex, class I, A 1.42993
SYP synaptophysin 1.34774
KRT37 keratin 37, type I 1.10358
SNAP91 synaptosomal-associated protein, 91kDa 1.09035
AP1M2 adaptor-related protein complex 1, mu 2 subunit 1.07055
KRT36 keratin 36, type I 1.04884
AP2M1 adaptor-related protein complex 2, mu 1 subunit 1.03679
VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa 1.0035
AP2B1 adaptor-related protein complex 2, beta 1 subunit 0.991225
SYT1 synaptotagmin I 0.958789
STON2 stonin 2 0.954961
SYN1 synapsin I 0.888397
SYNPR synaptoporin 0.887474
ADORA3 adenosine A3 receptor 0.848369
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 0.839187
ARHGAP23 Rho GTPase activating protein 23 0.83322
RAB3A RAB3A, member RAS oncogene family 0.831843
HLA-C major histocompatibility complex, class I, C 0.8245
ARHGAP20 Rho GTPase activating protein 20 0.787359
ARHGAP25 Rho GTPase activating protein 25 0.771819
ARHGAP12 Rho GTPase activating protein 12 0.769995
ARHGAP19 Rho GTPase activating protein 19 0.76726
UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B17 0.759069
ARHGAP22 Rho GTPase activating protein 22 0.71457
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 0.711465
ARHGAP9 Rho GTPase activating protein 9 0.706598
PRDM11 PR domain containing 11 0.701304
EPS15 epidermal growth factor receptor pathway substrate 15 0.680719
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 0.677238
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1 0.672894
ARHGAP6 Rho GTPase activating protein 6 0.656033
ARHGAP26 Rho GTPase activating protein 26 0.643144
MGAM maltase-glucoamylase 0.641858
GMIP GEM interacting protein 0.638861
TF transferrin 0.631598
A2M alpha-2-macroglobulin 0.624781
CORO7 coronin 7 0.623079
HIP1 huntingtin interacting protein 1 0.615861
RCAN1 regulator of calcineurin 1 0.615013
AMPH amphiphysin 0.614165
NAV2 neuron navigator 2 0.583849
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase 0.581758
CHN1 chimerin 1 0.578833
SLC30A3 solute carrier family 30 (zinc transporter), member 3 0.575495
ST8SIA5 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 5 0.574244
ARHGAP27 Rho GTPase activating protein 27 0.574244
ABCA7 ATP-binding cassette, sub-family A (ABC1), member 7 0.572578
AP1G1 adaptor-related protein complex 1, gamma 1 subunit 0.566754
PACSIN3 protein kinase C and casein kinase substrate in neurons 3 0.565508
GAK cyclin G associated kinase 0.558871
SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 0.558042
ARF1 ADP-ribosylation factor 1 0.557629
ZNRF1 zinc and ring finger 1, E3 ubiquitin protein ligase 0.548947
ARHGAP15 Rho GTPase activating protein 15 0.540294
ARHGAP24 Rho GTPase activating protein 24 0.53413
EPN1 epsin 1 0.533309
SYT2 synaptotagmin II 0.532078
HSPA8 heat shock 70kDa protein 8 0.531668
ARHGAP17 Rho GTPase activating protein 17 0.530028
IGLV1-50 immunoglobulin lambda variable 1-50 (non-functional) 0.527569
AP3B2 adaptor-related protein complex 3, beta 2 subunit 0.525931
ARHGAP5 Rho GTPase activating protein 5 0.524704
NSF N-ethylmaleimide-sensitive factor 0.523067
RHOU ras homolog family member U 0.516532
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.512047
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.50879
TGOLN2 trans-golgi network protein 2 0.501881
AAK1 AP2 associated kinase 1 0.496205
ARHGAP4 Rho GTPase activating protein 4 0.480855
SV2A synaptic vesicle glycoprotein 2A 0.476831
HAL histidine ammonia-lyase 0.470406
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha) 0.466799
RAP2B RAP2B, member of RAS oncogene family 0.463198
PIK3R2 phosphoinositide-3-kinase, regulatory subunit 2 (beta) 0.459602
SLC32A1 solute carrier family 32 (GABA vesicular transporter), member 1 0.457208
SSR1 signal sequence receptor, alpha 0.45641
SAR1A secretion associated, Ras related GTPase 1A 0.456012
ARF3 ADP-ribosylation factor 3 0.455613
RAB1B RAB1B, member RAS oncogene family 0.452427
TFRC transferrin receptor 0.447656
MAFG v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G 0.445275
HBA1 hemoglobin, alpha 1 0.442896
RAB3C RAB3C, member RAS oncogene family 0.442896
HBA2 hemoglobin, alpha 2 0.43696
AP1B1 adaptor-related protein complex 1, beta 1 subunit 0.431041
CST3 cystatin C 0.429072
SYN3 synapsin III 0.427497
ARHGAP10 Rho GTPase activating protein 10 0.423174
MIDN midnolin 0.419644
CD4 CD4 molecule 0.41182
STARD8 StAR-related lipid transfer (START) domain containing 8 0.408309
CHN2 chimerin 2 0.404415
PGRMC1 progesterone receptor membrane component 1 0.400139
TRAC T cell receptor alpha constant 0.383124
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.380814
ARHGAP21 Rho GTPase activating protein 21 0.362804
RAB3D RAB3D, member RAS oncogene family 0.360515
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 0.356324
SLC18A3 solute carrier family 18 (vesicular acetylcholine transporter), member 3 0.352901
RAB15 RAB15, member RAS oncogene family 0.352142
LDLRAP1 low density lipoprotein receptor adaptor protein 1 0.344935
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 0.344556
GLB1 galactosidase, beta 1 0.336241
GSTA2 glutathione S-transferase alpha 2 0.333602
HSPA4 heat shock 70kDa protein 4 0.324951
ERVW-1 endogenous retrovirus group W, member 1 0.32195
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 0.321575
SNAPIN SNAP-associated protein 0.320077
CSTA cystatin A (stefin A) 0.318953
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 0.315586
RACGAP1 Rac GTPase activating protein 1 0.315586
RBBP7 retinoblastoma binding protein 7 0.314839
KLB klotho beta 0.310358
DENND1A DENN/MADD domain containing 1A 0.307749
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1) 0.305143
CERS2 ceramide synthase 2 0.30254
KRT32 keratin 32, type I 0.302168
RABEP1 rabaptin, RAB GTPase binding effector protein 1 0.302168
ABAT 4-aminobutyrate aminotransferase 0.300311
SCNN1G sodium channel, non voltage gated 1 gamma subunit 0.297342
KRT35 keratin 35, type I 0.29586
NECAP1 NECAP endocytosis associated 1 0.292897
SNAP25 synaptosomal-associated protein, 25kDa 0.292157
SYNJ1 synaptojanin 1 0.291047
KIF13A kinesin family member 13A 0.290678
GSTA3 glutathione S-transferase alpha 3 0.283663
GSTA4 glutathione S-transferase alpha 4 0.281821
SYN2 synapsin II 0.281821
GSTA1 glutathione S-transferase alpha 1 0.279612
PDGFB platelet-derived growth factor beta polypeptide 0.279245
GSTM1 glutathione S-transferase mu 1 0.275569
TXNDC17 thioredoxin domain containing 17 0.274468
TPRG1L tumor protein p63 regulated 1-like 0.264946
ARHGAP18 Rho GTPase activating protein 18 0.26385
SIGLEC7 sialic acid binding Ig-like lectin 7 0.259837
LY9 lymphocyte antigen 9 0.259109
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.251839
SSR2 signal sequence receptor, beta (translocon-associated protein beta) 0.249664
PRB3 proline-rich protein BstNI subfamily 3 0.249302
PDCD6IP programmed cell death 6 interacting protein 0.240636
GP2 glycoprotein 2 (zymogen granule membrane) 0.239916
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.239916
AP1AR adaptor-related protein complex 1 associated regulatory protein 0.239916
ADORA2B adenosine A2b receptor 0.239197
MAFF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog F 0.237401
SRC SRC proto-oncogene, non-receptor tyrosine kinase 0.237401
RAB12 RAB12, member RAS oncogene family 0.235249
FURIN furin (paired basic amino acid cleaving enzyme) 0.232744
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) 0.229176
SYNRG synergin, gamma 0.224558
VAMP2 vesicle-associated membrane protein 2 (synaptobrevin 2) 0.219969
GCM2 glial cells missing homolog 2 (Drosophila) 0.218212
TSPAN7 tetraspanin 7 0.215412
RAB5A RAB5A, member RAS oncogene family 0.21228
CDKN2A cyclin-dependent kinase inhibitor 2A 0.209169
ST8SIA4 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 4 0.207108
ULBP2 UL16 binding protein 2 0.204718
DNAH8 dynein, axonemal, heavy chain 8 0.202684
SH3GL2 SH3-domain GRB2-like 2 0.199993
SYBU syntabulin (syntaxin-interacting) 0.197993
KRT75 keratin 75, type II 0.193394
RD3 retinal degeneration 3 0.192746
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 0.189222
DNM3 dynamin 3 0.187333
HPCA hippocalcin 0.185469
BOLL boule-like RNA-binding protein 0.184547
BCL2A1 BCL2-related protein A1 0.180339
ADRB2 adrenoceptor beta 2, surface 0.179167
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog 0.178299
HYAL1 hyaluronoglucosaminidase 1 0.177154
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 0.17687
NTS neurotensin 0.176024
ARRB1 arrestin, beta 1 0.173273
SOS1 son of sevenless homolog 1 (Drosophila) 0.172735
TRPV4 transient receptor potential cation channel, subfamily V, member 4 0.171937
SYPL1 synaptophysin-like 1 0.171937
KRT31 keratin 31, type I 0.17141
AQP6 aquaporin 6, kidney specific 0.170888
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa) 0.170114
STX6 syntaxin 6 0.166167
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.165697
CTSH cathepsin H 0.164089
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 0.163641
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 0.162763
DNM1 dynamin 1 0.160456
NTSR1 neurotensin receptor 1 (high affinity) 0.160053
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.159074
CDK20 cyclin-dependent kinase 20 0.156513
CD207 CD207 molecule, langerin 0.147997
C19ORF48 chromosome 19 open reading frame 48 0.144665
CD80 CD80 molecule 0.141611
AP1M1 adaptor-related protein complex 1, mu 1 subunit 0.135261
PPAN peter pan homolog (Drosophila) 0.135029
TECR trans-2,3-enoyl-CoA reductase 0.134742
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 0.134657
GADD45A growth arrest and DNA-damage-inducible, alpha 0.134621
GSAP gamma-secretase activating protein 0.134608
DVL2 dishevelled segment polarity protein 2 0.134584
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1 0.134497
ARHGAP1 Rho GTPase activating protein 1 0.134497
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B 0.134485
PCLO piccolo presynaptic cytomatrix protein 0.134208
NEUROG1 neurogenin 1 0.13408
RPS13 ribosomal protein S13 0.134002
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.133911
RTN1 reticulon 1 0.133911
CABIN1 calcineurin binding protein 1 0.133739
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.133725
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 0.133712
TFIP11 tuftelin interacting protein 11 0.133618
KRT83 keratin 83, type II 0.133149
NDN necdin, melanoma antigen (MAGE) family member 0.133134
ALB albumin 0.132992
HLA-DRB1 major histocompatibility complex, class II, DR beta 1 0.132906
CAT catalase 0.132716
GLA galactosidase, alpha 0.132627
DRD3 dopamine receptor D3 0.132568
OSGEP O-sialoglycoprotein endopeptidase 0.132448
DRD4 dopamine receptor D4 0.132311
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2 0.132281
ARF5 ADP-ribosylation factor 5 0.132189
ARF4 ADP-ribosylation factor 4 0.132189
HPD 4-hydroxyphenylpyruvate dioxygenase 0.132095
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 0.132064
CTSL cathepsin L 0.131986
HLA-B major histocompatibility complex, class I, B 0.131954
NT5C1A 5'-nucleotidase, cytosolic IA 0.131811
DDIT3 DNA-damage-inducible transcript 3 0.131779
KCNJ4 potassium channel, inwardly rectifying subfamily J, member 4 0.131682
GCDH glutaryl-CoA dehydrogenase 0.131436
PICALM phosphatidylinositol binding clathrin assembly protein 0.131235
TARP TCR gamma alternate reading frame protein 0.131082
FYB FYN binding protein 0.131047
IL4R interleukin 4 receptor 0.130734
CD19 CD19 molecule 0.130716
CTSB cathepsin B 0.130538
HIP1R huntingtin interacting protein 1 related 0.129966
SLPI secretory leukocyte peptidase inhibitor 0.129814
PER3 period circadian clock 3 0.129795
IL2 interleukin 2 0.129621
FIG4 FIG4 phosphoinositide 5-phosphatase 0.129562
ARF6 ADP-ribosylation factor 6 0.129245
M6PR mannose-6-phosphate receptor (cation dependent) 0.129041
SH2D1A SH2 domain containing 1A 0.128813
PCSK6 proprotein convertase subtilisin/kexin type 6 0.128751
MSMB microseminoprotein, beta- 0.128708
C4A complement component 4A (Rodgers blood group) 0.128581
HCFC1 host cell factor C1 0.12856
SORL1 sortilin-related receptor, L(DLR class) A repeats containing 0.128322
AMPD2 adenosine monophosphate deaminase 2 0.128322
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3 0.128278