clathrin-coated endocytic vesicle Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A clathrin-coated, membrane-bounded intracellular vesicle formed by invagination of the plasma membrane around an extracellular substance. (Gene Ontology, GO_0045334)
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Genes

98 proteins co-occuring with the clathrin-coated endocytic vesicle cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
AKAP13 A kinase (PRKA) anchor protein 13 2.05831
HAS1 hyaluronan synthase 1 2.0206
MYO1G myosin IG 1.66598
KRT38 keratin 38, type I 1.56162
SNAP91 synaptosomal-associated protein, 91kDa 1.2539
AP2M1 adaptor-related protein complex 2, mu 1 subunit 1.24079
AP1M2 adaptor-related protein complex 1, mu 2 subunit 1.22932
HLA-A major histocompatibility complex, class I, A 1.13318
AP2B1 adaptor-related protein complex 2, beta 1 subunit 1.11786
KRT36 keratin 36, type I 1.11327
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 1.03129
UGT2B17 UDP glucuronosyltransferase 2 family, polypeptide B17 0.945907
STON2 stonin 2 0.917644
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae) 0.896257
KRT37 keratin 37, type I 0.892556
ATP6AP1 ATPase, H+ transporting, lysosomal accessory protein 1 0.860311
HMHA1 histocompatibility (minor) HA-1 0.816699
A2M alpha-2-macroglobulin 0.804313
HIP1 huntingtin interacting protein 1 0.794687
NAV2 neuron navigator 2 0.759978
GAK cyclin G associated kinase 0.73287
TF transferrin 0.710136
EPN1 epsin 1 0.704831
DHX9 DEAH (Asp-Glu-Ala-His) box helicase 9 0.678978
AAK1 AP2 associated kinase 1 0.665096
EPS15 epidermal growth factor receptor pathway substrate 15 0.61883
AMPH amphiphysin 0.605706
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha) 0.590133
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11 0.516124
HLA-C major histocompatibility complex, class I, C 0.512862
DHX36 DEAH (Asp-Glu-Ala-His) box polypeptide 36 0.503506
LDLRAP1 low density lipoprotein receptor adaptor protein 1 0.503506
SLC9B2 solute carrier family 9, subfamily B (NHA2, cation proton antiporter 2), member 2 0.478843
TFRC transferrin receptor 0.458803
CERS2 ceramide synthase 2 0.458404
NECAP1 NECAP endocytosis associated 1 0.448054
SYNJ1 synaptojanin 1 0.445672
CD4 CD4 molecule 0.434196
TXNDC17 thioredoxin domain containing 17 0.428284
LY9 lymphocyte antigen 9 0.41182
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56 0.404026
ERVW-1 endogenous retrovirus group W, member 1 0.393162
PDCD6IP programmed cell death 6 interacting protein 0.392001
TGOLN2 trans-golgi network protein 2 0.380045
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding) 0.37966
GLB1 galactosidase, beta 1 0.373132
PRB3 proline-rich protein BstNI subfamily 3 0.370833
TSPAN7 tetraspanin 7 0.364713
UTY ubiquitously transcribed tetratricopeptide repeat containing, Y-linked 0.360896
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila) 0.348346
RD3 retinal degeneration 3 0.339261
PDGFB platelet-derived growth factor beta polypeptide 0.335487
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4 0.33511
HPCA hippocalcin 0.330589
ADRB2 adrenoceptor beta 2, surface 0.3227
HYAL1 hyaluronoglucosaminidase 1 0.319702
SLC2A8 solute carrier family 2 (facilitated glucose transporter), member 8 0.319328
SOS1 son of sevenless homolog 1 (Drosophila) 0.314091
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.303655
PIP5K1C phosphatidylinositol-4-phosphate 5-kinase, type I, gamma 0.300311
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12 0.298826
NTSR1 neurotensin receptor 1 (high affinity) 0.293637
CDK20 cyclin-dependent kinase 20 0.286614
PIP4K2A phosphatidylinositol-5-phosphate 4-kinase, type II, alpha 0.286245
DVL2 dishevelled segment polarity protein 2 0.283663
CD207 CD207 molecule, langerin 0.276671
PCLO piccolo presynaptic cytomatrix protein 0.273
NEUROG1 neurogenin 1 0.269335
RTN1 reticulon 1 0.264215
ST8SIA2 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 0.258745
TFIP11 tuftelin interacting protein 11 0.256197
HSPA8 heat shock 70kDa protein 8 0.251114
FURIN furin (paired basic amino acid cleaving enzyme) 0.251114
C19ORF48 chromosome 19 open reading frame 48 0.249302
ALB albumin 0.239916
GLA galactosidase, alpha 0.231315
DRD3 dopamine receptor D3 0.229888
DRD4 dopamine receptor D4 0.22385
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2 0.22279
ARF5 ADP-ribosylation factor 5 0.221025
ARF4 ADP-ribosylation factor 4 0.220673
GP2 glycoprotein 2 (zymogen granule membrane) 0.214366
NT5C1A 5'-nucleotidase, cytosolic IA 0.212627
KCNJ4 potassium channel, inwardly rectifying subfamily J, member 4 0.209858
PICALM phosphatidylinositol binding clathrin assembly protein 0.200663
NTS neurotensin 0.197662
IL4R interleukin 4 receptor 0.190814
CD19 CD19 molecule 0.190495
CD80 CD80 molecule 0.190175
ARRB1 arrestin, beta 1 0.190175
HIP1R huntingtin interacting protein 1 related 0.178299
PER3 period circadian clock 3 0.175745
ARF6 ADP-ribosylation factor 6 0.168101
SH2D1A SH2 domain containing 1A 0.1632
PCSK6 proprotein convertase subtilisin/kexin type 6 0.162546
MSMB microseminoprotein, beta- 0.16233
HCFC1 host cell factor C1 0.160658
AMPD2 adenosine monophosphate deaminase 2 0.158692