ciliary transition zone Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description A region of the cilium between the basal body and proximal segment that is characterized by Y-shaped assemblages that connect axonemal microtubules to the ciliary membrane. The ciliary transition zone appears to function as a gate that controls ciliary membrane composition. (Gene Ontology, GO_0035869)
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Genes

44 proteins co-occuring with the ciliary transition zone cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
B9D2 B9 protein domain 2 1.54291
B9D1 B9 protein domain 1 1.5017
TCTN3 tectonic family member 3 1.46891
CC2D2A coiled-coil and C2 domain containing 2A 1.38073
NPHP4 nephronophthisis 4 1.37796
TMEM231 transmembrane protein 231 1.3752
TCTN1 tectonic family member 1 1.36472
CEP162 centrosomal protein 162kDa 1.33142
TMEM237 transmembrane protein 237 1.32113
TCTN2 tectonic family member 2 1.24602
RPGRIP1L RPGRIP1-like 1.24498
CEP290 centrosomal protein 290kDa 1.21738
ARTN artemin 1.14085
THEMIS thymocyte selection associated 1.08577
NPHP1 nephronophthisis 1 (juvenile) 1.05236
TMEM216 transmembrane protein 216 1.03078
TMEM67 transmembrane protein 67 0.98488
RPGR retinitis pigmentosa GTPase regulator 0.952573
MKS1 Meckel syndrome, type 1 0.949713
CAD carbamoyl-phosphate synthetase 2, aspartate transcarbamylase, and dihydroorotase 0.887936
SSX2IP synovial sarcoma, X breakpoint 2 interacting protein 0.871346
FRMD6 FERM domain containing 6 0.843778
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.776384
PTOV1 prostate tumor overexpressed 1 0.744574
PAM16 presequence translocase-associated motor 16 homolog (S. cerevisiae) 0.707924
ASL argininosuccinate lyase 0.706156
INVS inversin 0.668992
PER3 period circadian clock 3 0.65388
UAP1 UDP-N-acetylglucosamine pyrophosphorylase 1 0.631171
RAG1 recombination activating gene 1 0.601909
USP9X ubiquitin specific peptidase 9, X-linked 0.553905
SHH sonic hedgehog 0.549773
RHOD ras homolog family member D 0.521841
GLI3 GLI family zinc finger 3 0.501881
DYNLT1 dynein, light chain, Tctex-type 1 0.487307
DVL1 dishevelled segment polarity protein 1 0.476429
HPX hemopexin 0.382739
CKM creatine kinase, muscle 0.366623
MMP8 matrix metallopeptidase 8 0.309986
FUCA1 fucosidase, alpha-L- 1, tissue 0.273
S100B S100 calcium binding protein B 0.267505
GHRL ghrelin/obestatin prepropeptide 0.246769
NBPF8 neuroblastoma breakpoint family, member 8 0.227041
AHI1 Abelson helper integration site 1 0.217861