chondrosarcoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

148 proteins co-occuring with the tissue chondrosarcoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
MMP13 matrix metallopeptidase 13 2.01185
MMP1 matrix metallopeptidase 1 1.61858
ADAMTS4 ADAM metallopeptidase with thrombospondin type 1 motif, 4 1.28233
ACAN aggrecan 1.27023
CSAG1 chondrosarcoma associated gene 1 1.25145
SOX9 SRY (sex determining region Y)-box 9 1.22871
COL2A1 collagen, type II, alpha 1 1.22603
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1 1.14476
MMP3 matrix metallopeptidase 3 1.08501
IL1B interleukin 1, beta 1.0484
ZNF253 zinc finger protein 253 1.01112
ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 1.00894
HS6ST3 heparan sulfate 6-O-sulfotransferase 3 1.00152
ZNF43 zinc finger protein 43 0.999344
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5 0.977616
PRRC2A proline-rich coiled-coil 2A 0.971119
SRPX sushi-repeat containing protein, X-linked 0.963767
P3H2 prolyl 3-hydroxylase 2 0.957722
LAYN layilin 0.942215
COL11A2 collagen, type XI, alpha 2 0.925907
BAX BCL2-associated X protein 0.885862
COL11A2P1 collagen, type XI, alpha 2 pseudogene 1 0.880781
BCL2L1 BCL2-like 1 0.836995
GPR78 G protein-coupled receptor 78 0.823594
LECT1 leukocyte cell derived chemotaxin 1 0.797291
NR4A3 nuclear receptor subfamily 4, group A, member 3 0.793959
FAM195A family with sequence similarity 195, member A 0.77774
MYBPH myosin binding protein H 0.769855
MAP3K5 mitogen-activated protein kinase kinase kinase 5 0.766954
MTAP methylthioadenosine phosphorylase 0.73062
HS6ST2 heparan sulfate 6-O-sulfotransferase 2 0.72733
CDKN2A cyclin-dependent kinase inhibitor 2A 0.721577
CSAG2 CSAG family, member 2 0.717061
CSAG3 CSAG family, member 3 0.717061
RAB38 RAB38, member RAS oncogene family 0.707221
ZNF331 zinc finger protein 331 0.689634
BCL3 B-cell CLL/lymphoma 3 0.681471
HDAC9 histone deacetylase 9 0.681064
HS6ST1 heparan sulfate 6-O-sulfotransferase 1 0.676172
NR4A2 nuclear receptor subfamily 4, group A, member 2 0.672506
COL10A1 collagen, type X, alpha 1 0.667622
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.658678
RUNX2 runt-related transcription factor 2 0.65056
JUN jun proto-oncogene 0.640023
RGCC regulator of cell cycle 0.638809
NR4A1 nuclear receptor subfamily 4, group A, member 1 0.628293
FGFRL1 fibroblast growth factor receptor-like 1 0.597263
ADGRG1 adhesion G protein-coupled receptor G1 0.58282
MMP2 matrix metallopeptidase 2 0.574816
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.567626
ZBTB7A zinc finger and BTB domain containing 7A 0.539396
TNF tumor necrosis factor 0.534647
C1S complement component 1, s subcomponent 0.530298
SULF2 sulfatase 2 0.50079
XYLT1 xylosyltransferase I 0.496483
PDCD5 programmed cell death 5 0.494136
ADAMTS9 ADAM metallopeptidase with thrombospondin type 1 motif, 9 0.489447
MIR192 microRNA 192 0.489057
MIR96 microRNA 96 0.483596
VAMP8 vesicle-associated membrane protein 8 0.477367
MMP9 matrix metallopeptidase 9 0.46766
BMP2 bone morphogenetic protein 2 0.466885
FURIN furin (paired basic amino acid cleaving enzyme) 0.4634
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.460692
MIA melanoma inhibitory activity 0.460305
MMP14 matrix metallopeptidase 14 (membrane-inserted) 0.457987
IL1A interleukin 1, alpha 0.45374
IFI16 interferon, gamma-inducible protein 16 0.448346
CTAG2 cancer/testis antigen 2 0.448346
TP53 tumor protein p53 0.445653
SMAD2 SMAD family member 2 0.443347
IL10RA interleukin 10 receptor, alpha 0.42993
MIR10B microRNA 10b 0.416195
MAP3K7 mitogen-activated protein kinase kinase kinase 7 0.410111
OSM oncostatin M 0.408972
STAT1 signal transducer and activator of transcription 1, 91kDa 0.405555
ADAM28 ADAM metallopeptidase domain 28 0.402523
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta 0.399871
ZNF501 zinc finger protein 501 0.396465
ZNF763 zinc finger protein 763 0.396465
ZNF629 zinc finger protein 629 0.396465
SULF1 sulfatase 1 0.393819
ZNF569 zinc finger protein 569 0.393064
ZNF44 zinc finger protein 44 0.379875
PLAU plasminogen activator, urokinase 0.379123
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.374993
ETV5 ets variant 5 0.374618
PRAME preferentially expressed antigen in melanoma 0.372743
MAPK8 mitogen-activated protein kinase 8 0.360409
ZNF436 zinc finger protein 436 0.358174
BCL6B B-cell CLL/lymphoma 6, member B 0.356314
HHAT hedgehog acyltransferase 0.355942
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.354455
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.35334
CORIN corin, serine peptidase 0.348519
SPINT1 serine peptidase inhibitor, Kunitz type 1 0.345188
S100A1 S100 calcium binding protein A1 0.34371
ANXA5 annexin A5 0.33156
CD44 CD44 molecule (Indian blood group) 0.330094
CTGF connective tissue growth factor 0.326798
CUX1 cut-like homeobox 1 0.32497
MET MET proto-oncogene, receptor tyrosine kinase 0.319134
COL1A1 collagen, type I, alpha 1 0.310783
TNC tenascin C 0.309335
FGFR3 fibroblast growth factor receptor 3 0.303559
LDHA lactate dehydrogenase A 0.303559
TIMP3 TIMP metallopeptidase inhibitor 3 0.302118
RECK reversion-inducing-cysteine-rich protein with kazal motifs 0.297089
TIMP1 TIMP metallopeptidase inhibitor 1 0.296372
CDK4 cyclin-dependent kinase 4 0.294223
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble 0.291008
CCND1 cyclin D1 0.286736
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 0.2779
TGFB1 transforming growth factor, beta 1 0.276495
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1 0.267791
TOB1 transducer of ERBB2, 1 0.256568
MMP8 matrix metallopeptidase 8 0.255567
CRYAA crystallin, alpha A 0.252261
CRLF1 cytokine receptor-like factor 1 0.252261
MIR145 microRNA 145 0.238406
ENDOG endonuclease G 0.236921
GRIN2D glutamate receptor, ionotropic, N-methyl D-aspartate 2D 0.234302
TGFB3 transforming growth factor, beta 3 0.230931
BCAN brevican 0.227707
EFNA5 ephrin-A5 0.2259
PPARG peroxisome proliferator-activated receptor gamma 0.220378
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.215534
PTBP1 polypyrimidine tract binding protein 1 0.21365
RARRES2 retinoic acid receptor responder (tazarotene induced) 2 0.213471
MTOR mechanistic target of rapamycin (serine/threonine kinase) 0.190846
NPS neuropeptide S 0.189282
APOD apolipoprotein D 0.185743
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.184056
PARP1 poly (ADP-ribose) polymerase 1 0.18385
FGF9 fibroblast growth factor 9 0.18385
MAP2K3 mitogen-activated protein kinase kinase 3 0.183665
ERN1 endoplasmic reticulum to nucleus signaling 1 0.183618
SRY sex determining region Y 0.18287
HDAC3 histone deacetylase 3 0.182845
CEBPB CCAAT/enhancer binding protein (C/EBP), beta 0.182593
RXRA retinoid X receptor, alpha 0.182516
CASP6 caspase 6, apoptosis-related cysteine peptidase 0.182232
CYR61 cysteine-rich, angiogenic inducer, 61 0.181532
PTHLH parathyroid hormone-like hormone 0.181111
ADIPOR2 adiponectin receptor 2 0.18091
B3GAT2 beta-1,3-glucuronyltransferase 2 0.180134
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b 0.180073
TIMP2 TIMP metallopeptidase inhibitor 2 0.179473