cholangiocarcinoma cell line Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
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Genes

152 proteins co-occuring with the tissue cholangiocarcinoma cell line in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2) 2.55968
ZSCAN18 zinc finger and SCAN domain containing 18 1.33591
NAE1 NEDD8 activating enzyme E1 subunit 1 1.24922
SPRR2A small proline-rich protein 2A 1.21802
TNFRSF10A tumor necrosis factor receptor superfamily, member 10a 1.1869
TNFSF10 tumor necrosis factor (ligand) superfamily, member 10 1.08899
KRT19 keratin 19, type I 0.900721
UBE2M ubiquitin-conjugating enzyme E2M 0.869794
UBA3 ubiquitin-like modifier activating enzyme 3 0.861363
GOPC golgi-associated PDZ and coiled-coil motif containing 0.83951
CASP3 caspase 3, apoptosis-related cysteine peptidase 0.836575
AMBRA1 autophagy/beclin-1 regulator 1 0.812726
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.788131
TP53 tumor protein p53 0.787299
BAX BCL2-associated X protein 0.780232
CCL15 chemokine (C-C motif) ligand 15 0.749166
COPS5 COP9 signalosome subunit 5 0.73062
EGFR epidermal growth factor receptor 0.721988
CDKN1B cyclin-dependent kinase inhibitor 1B (p27, Kip1) 0.71542
BCL2L1 BCL2-like 1 0.713779
NEK8 NIMA-related kinase 8 0.712139
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3 0.703945
MIR25 microRNA 25 0.635976
WNT2 wingless-type MMTV integration site family member 2 0.635572
CASP8 caspase 8, apoptosis-related cysteine peptidase 0.62991
FASLG Fas ligand (TNF superfamily, member 6) 0.624658
SSX4 synovial sarcoma, X breakpoint 4 0.606112
SSX4B synovial sarcoma, X breakpoint 4B 0.606112
SCG3 secretogranin III 0.59405
MET MET proto-oncogene, receptor tyrosine kinase 0.581618
SHC2 SHC (Src homology 2 domain containing) transforming protein 2 0.56603
STK3 serine/threonine kinase 3 0.564035
DCXR dicarbonyl/L-xylulose reductase 0.556467
SCGB2A1 secretoglobin, family 2A, member 1 0.551298
IFT88 intraflagellar transport 88 0.539
IL6 interleukin 6 0.537021
HAVCR1 hepatitis A virus cellular receptor 1 0.525166
NUPR1 nuclear protein, transcriptional regulator, 1 0.524377
RRM2B ribonucleotide reductase M2 B (TP53 inducible) 0.5228
AKT1 v-akt murine thymoma viral oncogene homolog 1 0.520041
STK26 serine/threonine protein kinase 26 0.507457
TFF1 trefoil factor 1 0.498832
CDK2 cyclin-dependent kinase 2 0.488276
PARP1 poly (ADP-ribose) polymerase 1 0.483986
DCK deoxycytidine kinase 0.483986
GRN granulin 0.481648
LAMB3 laminin, beta 3 0.478923
MIR21 microRNA 21 0.475034
MAGEA3 melanoma antigen family A3 0.470763
ANXA5 annexin A5 0.468436
MUC1 mucin 1, cell surface associated 0.465335
SSTR2 somatostatin receptor 2 0.461852
CDO1 cysteine dioxygenase type 1 0.461465
STYK1 serine/threonine/tyrosine kinase 1 0.459918
SMO smoothened, frizzled class receptor 0.444499
ICOSLG inducible T-cell co-stimulator ligand 0.43989
MGAT5 mannosyl (alpha-1,6-)-glycoprotein beta-1,6-N-acetyl-glucosaminyltransferase 0.431843
VEGFC vascular endothelial growth factor C 0.430695
WNT3 wingless-type MMTV integration site family, member 3 0.423436
EZH2 enhancer of zeste 2 polycomb repressive complex 2 subunit 0.420004
NOV nephroblastoma overexpressed 0.419242
DCLK1 doublecortin-like kinase 1 0.418861
CASP7 caspase 7, apoptosis-related cysteine peptidase 0.405176
SCTR secretin receptor 0.405176
PPP1R15A protein phosphatase 1, regulatory subunit 15A 0.395331
EBAG9 estrogen receptor binding site associated, antigen, 9 0.388158
PBK PDZ binding kinase 0.382884
CD274 CD274 molecule 0.36825
HRH4 histamine receptor H4 0.364513
CASP4 caspase 4, apoptosis-related cysteine peptidase 0.364139
BCL2 B-cell CLL/lymphoma 2 0.361155
TNF tumor necrosis factor 0.357058
NOS2 nitric oxide synthase 2, inducible 0.352969
ASPH aspartate beta-hydroxylase 0.351485
AFP alpha-fetoprotein 0.348889
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5 0.348148
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.345928
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.345928
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.345928
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.344818
SEMG1 semenogelin I 0.344079
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.344079
RPS6KA1 ribosomal protein S6 kinase, 90kDa, polypeptide 1 0.342233
BBC3 BCL2 binding component 3 0.340757
RECK reversion-inducing-cysteine-rich protein with kazal motifs 0.338177
MAPK3 mitogen-activated protein kinase 3 0.333028
PRDX1 peroxiredoxin 1 0.331194
CASP10 caspase 10, apoptosis-related cysteine peptidase 0.329727
FLOT1 flotillin 1 0.323144
LGALS3 lectin, galactoside-binding, soluble, 3 0.311145
ASXL1 additional sex combs like transcriptional regulator 1 0.311145
PDCD4 programmed cell death 4 (neoplastic transformation inhibitor) 0.306083
DMBT1 deleted in malignant brain tumors 1 0.302478
HGF hepatocyte growth factor (hepapoietin A; scatter factor) 0.302118
CCND1 cyclin D1 0.29996
HPD 4-hydroxyphenylpyruvate dioxygenase 0.298883
NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase) 0.29673
CFLAR CASP8 and FADD-like apoptosis regulator 0.294581
LCN2 lipocalin 2 0.293151
RAP1A RAP1A, member of RAS oncogene family 0.287092
DEFB1 defensin, beta 1 0.283899
TGFBR2 transforming growth factor, beta receptor II (70/80kDa) 0.276145
PRDX2 peroxiredoxin 2 0.267102
CASP9 caspase 9, apoptosis-related cysteine peptidase 0.256234
ANXA4 annexin A4 0.254902
LGALS1 lectin, galactoside-binding, soluble, 1 0.25457
TCF4 transcription factor 4 0.254239
SMAD4 SMAD family member 4 0.249329
IGF1R insulin-like growth factor 1 receptor 0.24804
HDAC6 histone deacetylase 6 0.242983
HRH3 histamine receptor H3 0.238406
KRAS Kirsten rat sarcoma viral oncogene homolog 0.23781
AHCY adenosylhomocysteinase 0.235167
XIAP X-linked inhibitor of apoptosis, E3 ubiquitin protein ligase 0.233731
KRT20 keratin 20, type I 0.233162
TNFRSF10B tumor necrosis factor receptor superfamily, member 10b 0.230931
SOX17 SRY (sex determining region Y)-box 17 0.226411
CEACAM6 carcinoembryonic antigen-related cell adhesion molecule 6 (non-specific cross reacting antigen) 0.221521
TERT telomerase reverse transcriptase 0.220604
BIRC5 baculoviral IAP repeat containing 5 0.220152
UBE2S ubiquitin-conjugating enzyme E2S 0.215341
CFTR cystic fibrosis transmembrane conductance regulator (ATP-binding cassette sub-family C, member 7) 0.190057
EIF4E eukaryotic translation initiation factor 4E 0.185128
CLDN3 claudin 3 0.180535
OGG1 8-oxoguanine DNA glycosylase 0.179257
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16 0.179196
TFF2 trefoil factor 2 0.178997
ETS1 v-ets avian erythroblastosis virus E26 oncogene homolog 1 0.178461
AHR aryl hydrocarbon receptor 0.177082
TFF3 trefoil factor 3 (intestinal) 0.175751
GGT2 gamma-glutamyltransferase 2 0.174916
CDK5 cyclin-dependent kinase 5 0.174481
EIF2AK3 eukaryotic translation initiation factor 2-alpha kinase 3 0.172752
IFNA1 interferon, alpha 1 0.17212
CXCL12 chemokine (C-X-C motif) ligand 12 0.163288
GGT1 gamma-glutamyltransferase 1 0.160224
TJP1 tight junction protein 1 0.156385
GUCY2C guanylate cyclase 2C 0.154264
NPR1 natriuretic peptide receptor 1 0.154067
GSTA3 glutathione S-transferase alpha 3 0.153661
GSTA4 glutathione S-transferase alpha 4 0.153458
GSTA2 glutathione S-transferase alpha 2 0.153418
GSTA1 glutathione S-transferase alpha 1 0.152972
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A 0.150288
MAPK8 mitogen-activated protein kinase 8 0.144873
ALPPL2 alkaline phosphatase, placental-like 2 0.14413
ALPL alkaline phosphatase, liver/bone/kidney 0.144031
ALPP alkaline phosphatase, placental 0.143929
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 0.143674
CXCL8 chemokine (C-X-C motif) ligand 8 0.137767
FTL ferritin, light polypeptide 0.129041
FTH1 ferritin, heavy polypeptide 1 0.127778