cerebral subcortex Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description That part of the brain substance underlying the cerebral cortex. (BRENDA Tissue and Enzyme Source Ontology, BTO_0002858)
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Genes

62 proteins co-occuring with the tissue cerebral subcortex in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
SLC4A10 solute carrier family 4, sodium bicarbonate transporter, member 10 1.91746
SLC4A8 solute carrier family 4, sodium bicarbonate cotransporter, member 8 1.64707
TLE6 transducin-like enhancer of split 6 1.55843
SEMA5B sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5B 1.39789
NLRP5 NLR family, pyrin domain containing 5 1.37545
SCX scleraxis basic helix-loop-helix transcription factor 1.34451
PADI6 peptidyl arginine deiminase, type VI 1.34043
SCYL1 SCY1-like 1 (S. cerevisiae) 0.987597
PAOX polyamine oxidase (exo-N4-amino) 0.949101
MAP2 microtubule-associated protein 2 0.900721
ALDH1B1 aldehyde dehydrogenase 1 family, member B1 0.783557
LDB1 LIM domain binding 1 0.769855
SCGN secretagogin, EF-hand calcium binding protein 0.762397
SLC8A2 solute carrier family 8 (sodium/calcium exchanger), member 2 0.749992
SP6 Sp6 transcription factor 0.740915
DNTT DNA nucleotidylexotransferase 0.688409
ALDH3A2 aldehyde dehydrogenase 3 family, member A2 0.68188
SP8 Sp8 transcription factor 0.680656
RELN reelin 0.646911
NPEPPS aminopeptidase puromycin sensitive 0.61699
ACSL1 acyl-CoA synthetase long-chain family member 1 0.593247
NRF1 nuclear respiratory factor 1 0.59124
SLC17A8 solute carrier family 17 (vesicular glutamate transporter), member 8 0.58242
FUT7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) 0.564833
CALB1 calbindin 1, 28kDa 0.509027
NRCAM neuronal cell adhesion molecule 0.492963
SGMS1 sphingomyelin synthase 1 0.482038
ALDH1A1 aldehyde dehydrogenase 1 family, member A1 0.478145
MBP myelin basic protein 0.451813
PPARGC1A peroxisome proliferator-activated receptor gamma, coactivator 1 alpha 0.409351
NDUFB11 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 11, 17.3kDa 0.407832
GFAP glial fibrillary acidic protein 0.395331
STS steroid sulfatase (microsomal), isozyme S 0.394576
MAP1B microtubule-associated protein 1B 0.385143
TFAM transcription factor A, mitochondrial 0.378372
ALDH2 aldehyde dehydrogenase 2 family (mitochondrial) 0.377621
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6 0.374993
ODC1 ornithine decarboxylase 1 0.369373
CASQ1 calsequestrin 1 (fast-twitch, skeletal muscle) 0.356314
CTTN cortactin 0.355198
CASQ2 calsequestrin 2 (cardiac muscle) 0.35334
FUS FUS RNA binding protein 0.34926
STX2 syntaxin 2 0.342602
KMT2A lysine (K)-specific methyltransferase 2A 0.33965
FLNA filamin A, alpha 0.320227
LRP5 low density lipoprotein receptor-related protein 5 0.317679
MAPT microtubule-associated protein tau 0.309335
PC pyruvate carboxylase 0.30464
SLC17A7 solute carrier family 17 (vesicular glutamate transporter), member 7 0.29996
SLC17A6 solute carrier family 17 (vesicular glutamate transporter), member 6 0.298883
CA1 carbonic anhydrase I 0.297089
CRYAB crystallin, alpha B 0.282483
SLC1A3 solute carrier family 1 (glial high affinity glutamate transporter), member 3 0.259254
ASRGL1 asparaginase like 1 0.25457
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.249006
TAC1 tachykinin, precursor 1 0.241132
P2RX7 purinergic receptor P2X, ligand gated ion channel, 7 0.230656
PIGA phosphatidylinositol glycan anchor biosynthesis, class A 0.229839
ANPEP alanyl (membrane) aminopeptidase 0.226411
PLAT plasminogen activator, tissue 0.21365
NOG noggin 0.21365
SULT2A1 sulfotransferase family, cytosolic, 2A, dehydroepiandrosterone (DHEA)-preferring, member 1 0.212586