central nervous system lymphoma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A hematologic cancer that has_material_basis_in lymphoma located_in central nervous system. (Human Disease Ontology, DOID_3234)
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Genes

93 genes co-occuring with the disease central nervous system lymphoma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
MTX3 metaxin 3 1.56444
BCL6 B-cell CLL/lymphoma 6 1.53436
CD4 CD4 molecule 1.20872
TBL1XR1 transducin (beta)-like 1 X-linked receptor 1 1.19921
PTPRK protein tyrosine phosphatase, receptor type, K 1.15538
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 1.1524
PDLIM7 PDZ and LIM domain 7 (enigma) 1.08747
NPFFR2 neuropeptide FF receptor 2 1.0837
FDCSP follicular dendritic cell secreted protein 1.069
FNDC1 fibronectin type III domain containing 1 0.935799
IRF4 interferon regulatory factor 4 0.904854
EMCN endomucin 0.902389
MED25 mediator complex subunit 25 0.892129
IL10 interleukin 10 0.856497
IVL involucrin 0.849945
FOXP1 forkhead box P1 0.820437
OR5K2 olfactory receptor, family 5, subfamily K, member 2 0.817155
COL12A1 collagen, type XII, alpha 1 0.80936
DOCK5 dedicator of cytokinesis 5 0.788442
MTR 5-methyltetrahydrofolate-homocysteine methyltransferase 0.740299
MIR21 microRNA 21 0.720461
CARD11 caspase recruitment domain family, member 11 0.695504
MALT1 MALT1 paracaspase 0.687491
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta 0.674713
CT45A1 cancer/testis antigen family 45, member A1 0.674713
SLC5A7 solute carrier family 5 (sodium/choline cotransporter), member 7 0.669936
PRDM1 PR domain containing 1, with ZNF domain 0.667947
MKNK1 MAP kinase interacting serine/threonine kinase 1 0.666358
SCGN secretagogin, EF-hand calcium binding protein 0.635921
FXYD3 FXYD domain containing ion transport regulator 3 0.631598
CXCL13 chemokine (C-X-C motif) ligand 13 0.62885
CXCR5 chemokine (C-X-C motif) receptor 5 0.623751
GCSAM germinal center-associated, signaling and motility 0.622183
STAT6 signal transducer and activator of transcription 6, interleukin-4 induced 0.592116
MTX1 metaxin 1 0.592116
CD27 CD27 molecule 0.575772
CARTPT CART prepropeptide 0.564112
TCN2 transcobalamin II 0.563723
PAX5 paired box 5 0.553239
MIR15B microRNA 15b 0.531541
MYD88 myeloid differentiation primary response 88 0.509959
PTPRC protein tyrosine phosphatase, receptor type, C 0.500761
HDGF hepatoma-derived growth factor 0.490454
OSMR oncostatin M receptor 0.48893
DOCK8 dedicator of cytokinesis 8 0.449194
ABCG2 ATP-binding cassette, sub-family G (WHITE), member 2 (Junior blood group) 0.448441
ERAS ES cell expressed Ras 0.445052
IL2 interleukin 2 0.433772
MGMT O-6-methylguanine-DNA methyltransferase 0.43227
GPR15 G protein-coupled receptor 15 0.431894
AVP arginine vasopressin 0.413901
LMO2 LIM domain only 2 (rhombotin-like 1) 0.412031
TIA1 TIA1 cytotoxic granule-associated RNA binding protein 0.406051
XBP1 X-box binding protein 1 0.404931
CD274 CD274 molecule 0.401572
FAXDC2 fatty acid hydroxylase domain containing 2 0.391885
CXCL12 chemokine (C-X-C motif) ligand 12 0.383337
TNFRSF8 tumor necrosis factor receptor superfamily, member 8 0.382966
CD79B CD79b molecule, immunoglobulin-associated beta 0.382594
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C 0.371107
SYNE1 spectrin repeat containing, nuclear envelope 1 0.36704
MRI1 methylthioribose-1-phosphate isomerase 1 0.364454
NCAM1 neural cell adhesion molecule 1 0.351187
IGLV7-43 immunoglobulin lambda variable 7-43 0.346409
EBF1 early B-cell factor 1 0.345308
MTHFR methylenetetrahydrofolate reductase (NAD(P)H) 0.329565
JMJD6 jumonji domain containing 6 0.324094
MIR222 microRNA 222 0.312464
DPYSL5 dihydropyrimidinase-like 5 0.304864
HDAC9 histone deacetylase 9 0.301976
RNASE1 ribonuclease, RNase A family, 1 (pancreatic) 0.285444
TOX thymocyte selection-associated high mobility group box 0.274376
TNFSF13B tumor necrosis factor (ligand) superfamily, member 13b 0.274021
IGHV4-39 immunoglobulin heavy variable 4-39 0.272597
CDKN2A cyclin-dependent kinase inhibitor 2A 0.264431
DHFR dihydrofolate reductase 0.263368
IRF7 interferon regulatory factor 7 0.249257
PIK3CG phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit gamma 0.249257
IGHV3-9 immunoglobulin heavy variable 3-9 0.246098
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.244345
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4 0.242245
PHYH phytanoyl-CoA 2-hydroxylase 0.240847
MIR223 microRNA 223 0.239799
RBPJ recombination signal binding protein for immunoglobulin kappa J region 0.228333
TNFAIP3 tumor necrosis factor, alpha-induced protein 3 0.222479
CST7 cystatin F (leukocystatin) 0.213621
PAX2 paired box 2 0.207245
CCL19 chemokine (C-C motif) ligand 19 0.205585
TP53 tumor protein p53 0.203604
PNMA2 paraneoplastic Ma antigen 2 0.200982
MIR17 microRNA 17 0.191719
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.190476
EIF4E eukaryotic translation initiation factor 4E 0.163523