cell suspension culture Gene Set

Dataset TISSUES Text-mining Tissue Protein Expression Evidence Scores
Category structural or functional annotations
Type tissue
Description Particles floating in (not necessarily on) a liquid medium, or the mix of particles and liquid itself. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000221)
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Genes

169 proteins co-occuring with the tissue cell suspension culture in abstracts of biomedical publications from the TISSUES Text-mining Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
DECR1 2,4-dienoyl CoA reductase 1, mitochondrial 1.50622
AGPS alkylglycerone phosphate synthase 1.41814
FDFT1 farnesyl-diphosphate farnesyltransferase 1 1.40018
CYP20A1 cytochrome P450, family 20, subfamily A, polypeptide 1 1.2198
DGAT1 diacylglycerol O-acyltransferase 1 1.1869
ANKRD34B ankyrin repeat domain 34B 1.11066
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 1.08192
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3 1.05809
GDE1 glycerophosphodiester phosphodiesterase 1 1.05545
STAG2 stromal antigen 2 1.03697
KIR2DL1 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 1 1.00676
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1 0.986728
RHBDF1 rhomboid 5 homolog 1 (Drosophila) 0.971552
HMGA1 high mobility group AT-hook 1 0.934911
HMGCR 3-hydroxy-3-methylglutaryl-CoA reductase 0.926336
PRODH proline dehydrogenase (oxidase) 1 0.885438
RAB24 RAB24, member RAS oncogene family 0.883744
GUSB glucuronidase, beta 0.880781
LY86 lymphocyte antigen 86 0.869373
GPR88 G protein-coupled receptor 88 0.827778
SQLE squalene epoxidase 0.820248
POR P450 (cytochrome) oxidoreductase 0.816068
PDIA4 protein disulfide isomerase family A, member 4 0.807716
ZNF346 zinc finger protein 346 0.798958
DYNC2H1 dynein, cytoplasmic 2, heavy chain 1 0.79146
CAT catalase 0.789796
NAP1L2 nucleosome assembly protein 1-like 2 0.77193
PMVK phosphomevalonate kinase 0.755777
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia) 0.745864
SOD2 superoxide dismutase 2, mitochondrial 0.731854
MIOX myo-inositol oxygenase 0.724041
HSP90B1 heat shock protein 90kDa beta (Grp94), member 1 0.696581
ATP5E ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit 0.694946
ADH1A alcohol dehydrogenase 1A (class I), alpha polypeptide 0.685551
ITGA8 integrin, alpha 8 0.673728
PCYT1B phosphate cytidylyltransferase 1, choline, beta 0.672913
TAT tyrosine aminotransferase 0.671285
ASL argininosuccinate lyase 0.668843
PCK2 phosphoenolpyruvate carboxykinase 2 (mitochondrial) 0.663149
CSN1S1 casein alpha s1 0.654618
GLUL glutamate-ammonia ligase 0.654618
PCK1 phosphoenolpyruvate carboxykinase 1 (soluble) 0.649344
CDKN3 cyclin-dependent kinase inhibitor 3 0.648532
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.644884
HIST2H3D histone cluster 2, H3d 0.634762
HIST2H3A histone cluster 2, H3a 0.634762
HIST2H3C histone cluster 2, H3c 0.634762
MUC5B mucin 5B, oligomeric mucus/gel-forming 0.612152
ALDH18A1 aldehyde dehydrogenase 18 family, member A1 0.597263
KITLG KIT ligand 0.595255
LPCAT3 lysophosphatidylcholine acyltransferase 3 0.567626
GGPS1 geranylgeranyl diphosphate synthase 1 0.564434
GSTA3 glutathione S-transferase alpha 3 0.560449
GSTA4 glutathione S-transferase alpha 4 0.558059
GSTA2 glutathione S-transferase alpha 2 0.558059
IPP intracisternal A particle-promoted polypeptide 0.55607
GSTA1 glutathione S-transferase alpha 1 0.553683
CCDC130 coiled-coil domain containing 130 0.551298
DHPS deoxyhypusine synthase 0.543359
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.537416
CXXC5 CXXC finger protein 5 0.537416
UPF1 UPF1 regulator of nonsense transcripts homolog (yeast) 0.536625
CTLA4 cytotoxic T-lymphocyte-associated protein 4 0.533065
CLMP CXADR-like membrane protein 0.529113
MGEA5 meningioma expressed antigen 5 (hyaluronidase) 0.523588
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa 0.511778
DDX47 DEAD (Asp-Glu-Ala-Asp) box polypeptide 47 0.503141
KIF23 kinesin family member 23 0.495309
MGAM maltase-glucoamylase 0.495309
HK1 hexokinase 1 0.485935
LCN1 lipocalin 1 0.478534
ATP5J ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6 0.475423
CYP1A2 cytochrome P450, family 1, subfamily A, polypeptide 2 0.473092
DPP8 dipeptidyl-peptidase 8 0.468436
IGHV3-30 immunoglobulin heavy variable 3-30 0.468048
KIN Kin17 DNA and RNA binding protein 0.446422
SYCP3 synaptonemal complex protein 3 0.445268
BOLL boule-like RNA-binding protein 0.443731
P4HB prolyl 4-hydroxylase, beta polypeptide 0.434906
TFDP3 transcription factor Dp family, member 3 0.424199
LOX lysyl oxidase 0.41848
MRS2 MRS2 magnesium transporter 0.416957
SHKBP1 SH3KBP1 binding protein 1 0.412771
SETD1B SET domain containing 1B 0.41087
AMER1 APC membrane recruitment protein 1 0.400628
SYCN syncollin 0.398357
ATN1 atrophin 1 0.394576
FTL ferritin, light polypeptide 0.391553
COMT catechol-O-methyltransferase 0.389289
DGAT2 diacylglycerol O-acyltransferase 2 0.388158
TSKU tsukushi, small leucine rich proteoglycan 0.387781
FTH1 ferritin, heavy polypeptide 1 0.38439
MVK mevalonate kinase 0.382884
HIST2H3PS2 histone cluster 2, H3, pseudogene 2 0.374243
H3F3B H3 histone, family 3B (H3.3B) 0.369747
H3F3A H3 histone, family 3A 0.369747
PCYT1A phosphate cytidylyltransferase 1, choline, alpha 0.365633
CYP1A1 cytochrome P450, family 1, subfamily A, polypeptide 1 0.364886
GSR glutathione reductase 0.352227
RNASEH2A ribonuclease H2, subunit A 0.347408
ADH4 alcohol dehydrogenase 4 (class II), pi polypeptide 0.344079
HPGDS hematopoietic prostaglandin D synthase 0.337072
SLC35A2 solute carrier family 35 (UDP-galactose transporter), member A2 0.326067
ADH5 alcohol dehydrogenase 5 (class III), chi polypeptide 0.314046
G6PD glucose-6-phosphate dehydrogenase 0.306805
GCDH glutaryl-CoA dehydrogenase 0.301039
CA8 carbonic anhydrase VIII 0.297806
ASS1 argininosuccinate synthase 1 0.297447
UGP2 UDP-glucose pyrophosphorylase 2 0.297089
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.295655
UBR5 ubiquitin protein ligase E3 component n-recognin 5 0.295655
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3) 0.294939
ODC1 ornithine decarboxylase 1 0.294581
ATP2A1 ATPase, Ca++ transporting, cardiac muscle, fast twitch 1 0.294223
ARG2 arginase 2 0.293151
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.291722
LMAN1 lectin, mannose-binding, 1 0.289939
PGD phosphogluconate dehydrogenase 0.286736
PYCR1 pyrroline-5-carboxylate reductase 1 0.286026
TERF1 telomeric repeat binding factor (NIMA-interacting) 1 0.28213
EXT1 exostosin glycosyltransferase 1 0.281776
CSF2 colony stimulating factor 2 (granulocyte-macrophage) 0.281423
HIST1H2AJ histone cluster 1, H2aj 0.28107
HIST1H2AD histone cluster 1, H2ad 0.28107
HIST1H2AH histone cluster 1, H2ah 0.280717
RRM1 ribonucleotide reductase M1 0.280364
H2AFJ H2A histone family, member J 0.280012
H2AFY2 H2A histone family, member Y2 0.2779
NMT1 N-myristoyltransferase 1 0.277197
HIST1H2AM histone cluster 1, H2am 0.276145
H2AFB1 H2A histone family, member B1 0.275794
H2AFB2 H2A histone family, member B2 0.275794
H2AFV H2A histone family, member V 0.275444
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.275094
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.274744
HIST1H2AG histone cluster 1, H2ag 0.274394
PTGDR prostaglandin D2 receptor (DP) 0.274045
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.273696
FXYD1 FXYD domain containing ion transport regulator 1 0.271952
GOT1 glutamic-oxaloacetic transaminase 1, soluble 0.270561
IL3 interleukin 3 0.270214
HIST1H2AE histone cluster 1, H2ae 0.269174
HIST1H2AB histone cluster 1, H2ab 0.269174
DDC dopa decarboxylase (aromatic L-amino acid decarboxylase) 0.265725
MDH2 malate dehydrogenase 2, NAD (mitochondrial) 0.265038
NOL3 nucleolar protein 3 (apoptosis repressor with CARD domain) 0.264353
MDH1 malate dehydrogenase 1, NAD (soluble) 0.257907
KLK15 kallikrein-related peptidase 15 0.2559
DHFR dihydrofolate reductase 0.252919
H2AFY H2A histone family, member Y 0.251934
RB1 retinoblastoma 1 0.240826
PDSS1 prenyl (decaprenyl) diphosphate synthase, subunit 1 0.231206
GLO1 glyoxalase I 0.228764
GOT2 glutamic-oxaloacetic transaminase 2, mitochondrial 0.228234
DNAH8 dynein, axonemal, heavy chain 8 0.224645
ACPP acid phosphatase, prostate 0.223419
ALPPL2 alkaline phosphatase, placental-like 2 0.22246
ALPL alkaline phosphatase, liver/bone/kidney 0.222224
MYC v-myc avian myelocytomatosis viral oncogene homolog 0.221755
ALPP alkaline phosphatase, placental 0.221755
TMPRSS15 transmembrane protease, serine 15 0.220831
PGM1 phosphoglucomutase 1 0.220604
HIST3H2BB histone cluster 3, H2bb 0.218186
HIST2H2BF histone cluster 2, H2bf 0.218186
HIST1H2BH histone cluster 1, H2bh 0.217762
HIST1H2BD histone cluster 1, H2bd 0.217346
VIL1 villin 1 0.216325
HIST1H2BA histone cluster 1, H2ba 0.215147
TGFBI transforming growth factor, beta-induced, 68kDa 0.214202