cell projection cytoplasm Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description All of the contents of a cell projection, excluding the plasma membrane surrounding the projection. (Gene Ontology, GO_0032838)
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Genes

183 proteins co-occuring with the cell projection cytoplasm cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2 1.35375
DNAH9 dynein, axonemal, heavy chain 9 1.23661
GAS8 growth arrest-specific 8 1.17106
CCDC65 coiled-coil domain containing 65 1.10766
AKAP14 A kinase (PRKA) anchor protein 14 1.05589
IQCB1 IQ motif containing B1 1.04833
TUBA1A tubulin, alpha 1a 1.01436
TTC25 tetratricopeptide repeat domain 25 0.996613
DNAH5 dynein, axonemal, heavy chain 5 0.970814
SPAG6 sperm associated antigen 6 0.927952
ARL13B ADP-ribosylation factor-like 13B 0.925604
DNAH10 dynein, axonemal, heavy chain 10 0.905996
BBS7 Bardet-Biedl syndrome 7 0.905067
TCTN1 tectonic family member 1 0.866746
DNAI1 dynein, axonemal, intermediate chain 1 0.864907
CEP41 centrosomal protein 41kDa 0.863988
TRAF3IP1 TNF receptor-associated factor 3 interacting protein 1 0.86169
TTBK2 tau tubulin kinase 2 0.855257
TPGS1 tubulin polyglutamylase complex subunit 1 0.851583
DGAT2L6 diacylglycerol O-acyltransferase 2-like 6 0.841482
BBS4 Bardet-Biedl syndrome 4 0.818075
TTC8 tetratricopeptide repeat domain 8 0.786444
IFT22 intraflagellar transport 22 0.785071
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1 0.78004
PPP1R7 protein phosphatase 1, regulatory subunit 7 0.769083
RPGR retinitis pigmentosa GTPase regulator 0.765438
TCTN2 tectonic family member 2 0.765438
IFT57 intraflagellar transport 57 0.764072
IFT172 intraflagellar transport 172 0.747737
HECA headcase homolog (Drosophila) 0.744122
MKS1 Meckel syndrome, type 1 0.73018
IFT88 intraflagellar transport 88 0.715014
BBS1 Bardet-Biedl syndrome 1 0.707039
AGTPBP1 ATP/GTP binding protein 1 0.700863
ARMC4 armadillo repeat containing 4 0.700423
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13 0.682463
GRIA4 glutamate receptor, ionotropic, AMPA 4 0.680719
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1 0.677673
SAMD4A sterile alpha motif domain containing 4A 0.657757
DNAAF1 dynein, axonemal, assembly factor 1 0.656464
C2CD3 C2 calcium-dependent domain containing 3 0.65345
IPPK inositol 1,3,4,5,6-pentakisphosphate 2-kinase 0.64958
FUZ fuzzy planar cell polarity protein 0.636295
INVS inversin 0.622229
TMEM216 transmembrane protein 216 0.615013
CCDC39 coiled-coil domain containing 39 0.612048
CCDC40 coiled-coil domain containing 40 0.610778
LCA5 Leber congenital amaurosis 5 0.606128
IGHV1-2 immunoglobulin heavy variable 1-2 0.604862
LRRC6 leucine rich repeat containing 6 0.60444
TTLL6 tubulin tyrosine ligase-like family member 6 0.604017
KIF17 kinesin family member 17 0.598117
DNAH8 dynein, axonemal, heavy chain 8 0.589714
B9D2 B9 protein domain 2 0.588037
DNAH12 dynein, axonemal, heavy chain 12 0.582594
DNAH14 dynein, axonemal, heavy chain 14 0.582594
CAPRIN1 cell cycle associated protein 1 0.580504
CEP97 centrosomal protein 97kDa 0.572578
PLEKHN1 pleckstrin homology domain containing, family N member 1 0.571329
SHH sonic hedgehog 0.561772
RSPH1 radial spoke head 1 homolog (Chlamydomonas) 0.561358
B9D1 B9 protein domain 1 0.557214
RSPH6A radial spoke head 6 homolog A (Chlamydomonas) 0.556387
TTL tubulin tyrosine ligase 0.554732
HYDIN HYDIN, axonemal central pair apparatus protein 0.544
APOPT1 apoptogenic 1, mitochondrial 0.543176
BBS5 Bardet-Biedl syndrome 5 0.539472
KIF27 kinesin family member 27 0.533719
CEP290 centrosomal protein 290kDa 0.531258
ARL6 ADP-ribosylation factor-like 6 0.529208
PACRG PARK2 co-regulated 0.512047
SSNA1 Sjogren syndrome nuclear autoantigen 1 0.503099
DNAI2 dynein, axonemal, intermediate chain 2 0.498231
HNRNPA3 heterogeneous nuclear ribonucleoprotein A3 0.490135
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.479245
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.479245
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.478843
WDR19 WD repeat domain 19 0.478843
CPEB1 cytoplasmic polyadenylation element binding protein 1 0.478038
TUBA4A tubulin, alpha 4a 0.475625
BBS2 Bardet-Biedl syndrome 2 0.473617
GLI3 GLI family zinc finger 3 0.473617
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.473617
TUBD1 tubulin, delta 1 0.472011
CC2D2A coiled-coil and C2 domain containing 2A 0.470005
EFHC1 EF-hand domain (C-terminal) containing 1 0.468001
PQBP1 polyglutamine binding protein 1 0.465198
RSPH4A radial spoke head 4 homolog A (Chlamydomonas) 0.459203
GLI2 GLI family zinc finger 2 0.454816
FRMD6 FERM domain containing 6 0.453621
AGO2 argonaute RISC catalytic component 2 0.448451
MARK4 MAP/microtubule affinity-regulating kinase 4 0.433801
FNDC3A fibronectin type III domain containing 3A 0.432224
KIF3A kinesin family member 3A 0.431041
SPA17 sperm autoantigenic protein 17 0.424353
TMEM67 transmembrane protein 67 0.41143
CD14 CD14 molecule 0.40675
HYLS1 hydrolethalus syndrome 1 0.402859
CEP164 centrosomal protein 164kDa 0.398587
DUOXA1 dual oxidase maturation factor 1 0.388523
DFNB31 deafness, autosomal recessive 31 0.388523
PRPH2 peripherin 2 (retinal degeneration, slow) 0.378122
ARL3 ADP-ribosylation factor-like 3 0.37697
FXR2 fragile X mental retardation, autosomal homolog 2 0.375818
LDB3 LIM domain binding 3 0.37045
DDX1 DEAD (Asp-Glu-Ala-Asp) box helicase 1 0.370067
ZNF77 zinc finger protein 77 0.359371
STIL SCL/TAL1 interrupting locus 0.349484
RAB3C RAB3C, member RAS oncogene family 0.343799
NPHP4 nephronophthisis 4 0.339639
ODF1 outer dense fiber of sperm tails 1 0.338884
MAP2 microtubule-associated protein 2 0.334356
KHSRP KH-type splicing regulatory protein 0.332095
IFT20 intraflagellar transport 20 0.332095
OFD1 oral-facial-digital syndrome 1 0.326829
CNTLN centlein, centrosomal protein 0.325702
NPAS4 neuronal PAS domain protein 4 0.316334
NPHP1 nephronophthisis 1 (juvenile) 0.313718
CATSPER1 cation channel, sperm associated 1 0.306632
PCNT pericentrin 0.295119
RAB3B RAB3B, member RAS oncogene family 0.291047
NEDD9 neural precursor cell expressed, developmentally down-regulated 9 0.287721
KIF3B kinesin family member 3B 0.280716
PTMS parathymosin 0.278877
VPS72 vacuolar protein sorting 72 homolog (S. cerevisiae) 0.277774
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.276304
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.272267
VANGL2 VANGL planar cell polarity protein 2 0.269335
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1 0.268237
ROS1 ROS proto-oncogene 1 , receptor tyrosine kinase 0.264215
CD177 CD177 molecule 0.260202
MAP1A microtubule-associated protein 1A 0.259837
PPL periplakin 0.256925
SSTR3 somatostatin receptor 3 0.255107
LPIN1 lipin 1 0.250026
PKD1 polycystic kidney disease 1 (autosomal dominant) 0.242076
DGCR8 DGCR8 microprocessor complex subunit 0.239557
CARM1 coactivator-associated arginine methyltransferase 1 0.238119
OSTC oligosaccharyltransferase complex subunit (non-catalytic) 0.232744
CDC34 cell division cycle 34 0.232386
NRGN neurogranin (protein kinase C substrate, RC3) 0.231672
ARC activity-regulated cytoskeleton-associated protein 0.230245
MN1 meningioma (disrupted in balanced translocation) 1 0.227397
GRM4 glutamate receptor, metabotropic 4 0.218563
ICK intestinal cell (MAK-like) kinase 0.216111
DDR1 discoidin domain receptor tyrosine kinase 1 0.215412
FOXJ1 forkhead box J1 0.213669
DISC1 disrupted in schizophrenia 1 0.209513
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5) 0.200663
ENTPD2 ectonucleoside triphosphate diphosphohydrolase 2 0.186397
BDNF brain-derived neurotrophic factor 0.183025
MADCAM1 mucosal vascular addressin cell adhesion molecule 1 0.179752
MYO1B myosin IB 0.175188
AKAP1 A kinase (PRKA) anchor protein 1 0.175188
PHF12 PHD finger protein 12 0.174087
GRIK1 glutamate receptor, ionotropic, kainate 1 0.171937
PRMT1 protein arginine methyltransferase 1 0.170629
HTT huntingtin 0.166405
RFX1 regulatory factor X, 1 (influences HLA class II expression) 0.157218
KCNC1 potassium channel, voltage gated Shaw related subfamily C, member 1 0.139322
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.139047
GRM2 glutamate receptor, metabotropic 2 0.139025
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1 0.138612
CYTH1 cytohesin 1 0.138233
WNT5A wingless-type MMTV integration site family, member 5A 0.138192
OLIG2 oligodendrocyte lineage transcription factor 2 0.138167
CD163 CD163 molecule 0.136955
CD34 CD34 molecule 0.135566
GRM5 glutamate receptor, metabotropic 5 0.135398
GRM1 glutamate receptor, metabotropic 1 0.134522
SDF4 stromal cell derived factor 4 0.134093
CTSC cathepsin C 0.133591
MAG myelin associated glycoprotein 0.133441
CTTN cortactin 0.131666
ADA adenosine deaminase 0.131184
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like 0.130448
CRYGD crystallin, gamma D 0.13021
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2) 0.129503
CD5 CD5 molecule 0.129062
RAB3D RAB3D, member RAS oncogene family 0.128918
DROSHA drosha, ribonuclease type III 0.128751
AURKA aurora kinase A 0.128278
IL13 interleukin 13 0.128235