cell envelope Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description An envelope that surrounds a bacterial cell and includes the cytoplasmic membrane and everything external, encompassing the periplasmic space, cell wall, and outer membrane if present. (Gene Ontology, GO_0030313)
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Genes

196 proteins co-occuring with the cell envelope cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
LOR loricrin 2.55743
TGM1 transglutaminase 1 2.07724
IVL involucrin 2.04159
FLG filaggrin 1.77015
LYZ lysozyme 1.53557
TGM3 transglutaminase 3 1.46722
CES1P1 carboxylesterase 1 pseudogene 1 1.37243
SPRR3 small proline-rich protein 3 1.3412
CDAN1 codanin 1 1.31897
IL31RA interleukin 31 receptor A 1.27133
RPTN repetin 1.26762
PNRC1 proline-rich nuclear receptor coactivator 1 1.26604
SPRR4 small proline-rich protein 4 1.24341
ANKRD54 ankyrin repeat domain 54 1.23818
CSTA cystatin A (stefin A) 1.234
SCEL sciellin 1.21221
SPRR2A small proline-rich protein 2A 1.15979
SPRR1B small proline-rich protein 1B 1.14904
TCHH trichohyalin 1.13778
ESX1 ESX homeobox 1 1.10409
LIAS lipoic acid synthetase 1.0934
CRLS1 cardiolipin synthase 1 1.06044
CSN1S1 casein alpha s1 1.01585
PPL periplakin 0.988782
KPRP keratinocyte proline-rich protein 0.974198
MGAT4C MGAT4 family, member C 0.965512
ELF3 E74-like factor 3 (ets domain transcription factor, epithelial-specific ) 0.949236
ARAF A-Raf proto-oncogene, serine/threonine kinase 0.94876
CSN2 casein beta 0.947808
SPRR2D small proline-rich protein 2D 0.940215
NIPAL4 NIPA-like domain containing 4 0.88286
KRTDAP keratinocyte differentiation-associated protein 0.872266
LCE1D late cornified envelope 1D 0.832302
YDJC YdjC homolog (bacterial) 0.821746
HTRA1 HtrA serine peptidase 1 0.815322
ANXA4 annexin A4 0.811652
OR1J1 olfactory receptor, family 1, subfamily J, member 1 0.8089
JMJD6 jumonji domain containing 6 0.801562
LAP3 leucine aminopeptidase 3 0.798811
CDSN corneodesmosin 0.788733
HRNR hornerin 0.785529
LPO lactoperoxidase 0.773645
KRT10 keratin 10, type I 0.770907
MGAM maltase-glucoamylase 0.765893
TLR2 toll-like receptor 2 0.765438
CASP14 caspase 14, apoptosis-related cysteine peptidase 0.764072
THRB thyroid hormone receptor, beta 0.745929
SPRR1A small proline-rich protein 1A 0.728389
CLEC3A C-type lectin domain family 3, member A 0.727494
ALPPL2 alkaline phosphatase, placental-like 2 0.725705
ALPP alkaline phosphatase, placental 0.724812
ALPL alkaline phosphatase, liver/bone/kidney 0.724812
DAZAP2 DAZ associated protein 2 0.718125
SH3RF2 SH3 domain containing ring finger 2 0.711908
CLEC2B C-type lectin domain family 2, member B 0.711022
CLEC10A C-type lectin domain family 10, member A 0.704831
LTF lactotransferrin 0.702185
PDCD7 programmed cell death 7 0.696905
ADSL adenylosuccinate lyase 0.677673
TPD52 tumor protein D52 0.675934
GPR162 G protein-coupled receptor 162 0.673762
GBAP1 glucosidase, beta, acid pseudogene 1 0.660345
UGP2 UDP-glucose pyrophosphorylase 2 0.622654
ABCA12 ATP-binding cassette, sub-family A (ABC1), member 12 0.613742
TGM5 transglutaminase 5 0.599802
ARPP21 cAMP-regulated phosphoprotein, 21kDa 0.587618
MRAP melanocortin 2 receptor accessory protein 0.576747
CSN3 casein kappa 0.576747
FLG2 filaggrin family member 2 0.559285
CD79A CD79a molecule, immunoglobulin-associated alpha 0.544
HSPD1 heat shock 60kDa protein 1 (chaperonin) 0.527979
FAM132A family with sequence similarity 132, member A 0.50635
DNAH8 dynein, axonemal, heavy chain 8 0.504724
KRT1 keratin 1, type II 0.503099
DYNLT1 dynein, light chain, Tctex-type 1 0.501476
HIP1 huntingtin interacting protein 1 0.497826
CYP4F22 cytochrome P450, family 4, subfamily F, polypeptide 22 0.489731
DSC1 desmocollin 1 0.48287
CXCL6 chemokine (C-X-C motif) ligand 6 0.478843
ALOXE3 arachidonate lipoxygenase 3 0.469604
ALOX12B arachidonate 12-lipoxygenase, 12R type 0.462398
MAP3K12 mitogen-activated protein kinase kinase kinase 12 0.458404
PRR4 proline rich 4 (lacrimal) 0.453621
TLR6 toll-like receptor 6 0.448848
PRTG protogenin 0.444085
PROL1 proline rich, lacrimal 1 0.436565
ANXA6 annexin A6 0.434591
MRC1 mannose receptor, C type 1 0.430253
RNASE7 ribonuclease, RNase A family, 7 0.409089
EVPL envoplakin 0.407919
GRHL3 grainyhead-like 3 (Drosophila) 0.405582
CROCC ciliary rootlet coiled-coil, rootletin 0.395485
CAMP cathelicidin antimicrobial peptide 0.395098
HLCS holocarboxylase synthetase (biotin-(proprionyl-CoA-carboxylase (ATP-hydrolysing)) ligase) 0.393162
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) 0.391228
NXT1 nuclear transport factor 2-like export factor 1 0.388909
AOAH acyloxyacyl hydrolase (neutrophil) 0.380429
HRAS Harvey rat sarcoma viral oncogene homolog 0.376586
CLPP caseinolytic mitochondrial matrix peptidase proteolytic subunit 0.363567
DGKB diacylglycerol kinase, beta 90kDa 0.354802
S100A3 S100 calcium binding protein A3 0.353282
TLR1 toll-like receptor 1 0.348725
DCD dermcidin 0.347587
CAT catalase 0.341529
KRT33A keratin 33A, type I 0.338884
GYLTL1B glycosyltransferase-like 1B 0.332095
POU2F3 POU class 2 homeobox 3 0.329461
PGS1 phosphatidylglycerophosphate synthase 1 0.329084
TXN thioredoxin 0.324951
DHRS2 dehydrogenase/reductase (SDR family) member 2 0.320451
CWC15 CWC15 spliceosome-associated protein 0.319328
LOXL1 lysyl oxidase-like 1 0.314091
ASB14 ankyrin repeat and SOCS box containing 14 0.307004
LUM lumican 0.304771
GJB4 gap junction protein, beta 4, 30.3kDa 0.303655
SLC22A18 solute carrier family 22, member 18 0.302912
LBP lipopolysaccharide binding protein 0.301797
CXCL8 chemokine (C-X-C motif) ligand 8 0.300311
G6PD glucose-6-phosphate dehydrogenase 0.298455
HAS1 hyaluronan synthase 1 0.294007
CLPB ClpB homolog, mitochondrial AAA ATPase chaperonin 0.292897
SCX scleraxis basic helix-loop-helix transcription factor 0.289569
DYNC2LI1 dynein, cytoplasmic 2, light intermediate chain 1 0.282189
USE1 unconventional SNARE in the ER 1 homolog (S. cerevisiae) 0.281821
GJB5 gap junction protein, beta 5, 31.1kDa 0.280716
GP5 glycoprotein V (platelet) 0.272633
CDS2 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 2 0.264215
SUGP1 SURP and G patch domain containing 1 0.262025
TLR4 toll-like receptor 4 0.261296
FTL ferritin, light polypeptide 0.256925
LRBA LPS-responsive vesicle trafficking, beach and anchor containing 0.255834
FTH1 ferritin, heavy polypeptide 1 0.255107
POTEI POTE ankyrin domain family, member I 0.255107
TFF1 trefoil factor 1 0.254743
MTX1 metaxin 1 0.25438
AK7 adenylate kinase 7 0.253653
ATP12A ATPase, H+/K+ transporting, nongastric, alpha polypeptide 0.252927
CYP4F2 cytochrome P450, family 4, subfamily F, polypeptide 2 0.252564
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide 0.251839
ACT actin-like protein (ACT) gene 0.251839
CHPT1 choline phosphotransferase 1 0.250751
POTEF POTE ankyrin domain family, member F 0.249302
PGLYRP2 peptidoglycan recognition protein 2 0.240636
STS steroid sulfatase (microsomal), isozyme S 0.234174
KRT4 keratin 4, type II 0.233817
PDXP pyridoxal (pyridoxine, vitamin B6) phosphatase 0.232744
PCYT1B phosphate cytidylyltransferase 1, choline, beta 0.232386
HPSE2 heparanase 2 (inactive) 0.22385
MALL mal, T-cell differentiation protein-like 0.215412
ACTG2 actin, gamma 2, smooth muscle, enteric 0.211933
SAMM50 SAMM50 sorting and assembly machinery component 0.207451
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.206766
CASP5 caspase 5, apoptosis-related cysteine peptidase 0.205059
BNIP2 BCL2/adenovirus E1B 19kDa interacting protein 2 0.203022
DHFR dihydrofolate reductase 0.199993
CEPT1 choline/ethanolamine phosphotransferase 1 0.199325
ST5 suppression of tumorigenicity 5 0.196339
S1PR5 sphingosine-1-phosphate receptor 5 0.195681
UGDH UDP-glucose 6-dehydrogenase 0.195353
TREH trehalase (brush-border membrane glycoprotein) 0.194371
BPI bactericidal/permeability-increasing protein 0.193394
SOD2 superoxide dismutase 2, mitochondrial 0.191777
CRNN cornulin 0.190814
NHS Nance-Horan syndrome (congenital cataracts and dental anomalies) 0.187646
ACTA2 actin, alpha 2, smooth muscle, aorta 0.186397
UBN1 ubinuclein 1 0.183935
CNOT2 CCR4-NOT transcription complex, subunit 2 0.18093
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3 0.180045
PNMA2 paraneoplastic Ma antigen 2 0.179167
MSL3 male-specific lethal 3 homolog (Drosophila) 0.178588
ANXA1 annexin A1 0.178011
MYD88 myeloid differentiation primary response 88 0.175188
PSAP prosaposin 0.173273
ALB albumin 0.173003
PDHB pyruvate dehydrogenase (lipoamide) beta 0.173003
MUC3A mucin 3A, cell surface associated 0.171673
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase 0.171673
PTDSS1 phosphatidylserine synthase 1 0.170629
PHB2 prohibitin 2 0.170629
RNASEH2A ribonuclease H2, subunit A 0.170371
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.169099
MPO myeloperoxidase 0.168847
HM13 histocompatibility (minor) 13 0.168101
COLEC12 collectin sub-family member 12 0.167125
BCAT2 branched chain amino-acid transaminase 2, mitochondrial 0.166405
DSG1 desmoglein 1 0.162546
NOD1 nucleotide-binding oligomerization domain containing 1 0.16233
HAL histidine ammonia-lyase 0.162117
LTB lymphotoxin beta (TNF superfamily, member 3) 0.161905
CNTN3 contactin 3 (plasmacytoma associated) 0.161484
BCAT1 branched chain amino-acid transaminase 1, cytosolic 0.160658
METAP1 methionyl aminopeptidase 1 0.160658
STATH statherin 0.160254
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1 0.159856
REL v-rel avian reticuloendotheliosis viral oncogene homolog 0.159658
SECISBP2 SECIS binding protein 2 0.157397