bone benign neoplasm Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A connective tissue benign neoplasm that is located_in bone. (Human Disease Ontology, DOID_0060094)
Similar Terms
Downloads & Tools

Genes

114 genes co-occuring with the disease bone benign neoplasm in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
ERCC6 excision repair cross-complementation group 6 1.71043
CDC73 cell division cycle 73 1.63276
KDM7A lysine (K)-specific demethylase 7A 1.27606
USP6 ubiquitin specific peptidase 6 1.25515
GNAS GNAS complex locus 1.24863
ZNF133 zinc finger protein 133 1.18841
ODAM odontogenic, ameloblast asssociated 1.149
ZNRF3 zinc and ring finger 3 1.06144
KREMEN1 kringle containing transmembrane protein 1 0.99697
TUBA1C tubulin, alpha 1c 0.948269
CALD1 caldesmon 1 0.838476
TUBB2A tubulin, beta 2A class IIa 0.818796
TUBB tubulin, beta class I 0.778613
SPARC secreted protein, acidic, cysteine-rich (osteonectin) 0.777386
ATP5B ATP synthase, H+ transporting, mitochondrial F1 complex, beta polypeptide 0.772479
ALPPL2 alkaline phosphatase, placental-like 2 0.736243
ALPP alkaline phosphatase, placental 0.735838
ALPL alkaline phosphatase, liver/bone/kidney 0.735433
ADCY1 adenylate cyclase 1 (brain) 0.711989
LEMD3 LEM domain containing 3 0.668742
YWHAZ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, zeta 0.654067
HMMR hyaluronan-mediated motility receptor (RHAMM) 0.652089
S100A1 S100 calcium binding protein A1 0.650903
TMTC1 transmembrane and tetratricopeptide repeat containing 1 0.622575
ULK1 unc-51 like autophagy activating kinase 1 0.616312
BGLAP bone gamma-carboxyglutamate (gla) protein 0.611229
CYS1 cystin 1 0.591337
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme 0.581606
CDH11 cadherin 11, type 2, OB-cadherin (osteoblast) 0.555568
THEM4 thioesterase superfamily member 4 0.544705
S100A2 S100 calcium binding protein A2 0.526132
SLC9A3R1 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3 regulator 1 0.524588
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.497321
GFER growth factor, augmenter of liver regeneration 0.496175
PPP1CA protein phosphatase 1, catalytic subunit, alpha isozyme 0.472604
RUNX2 runt-related transcription factor 2 0.468819
JAG2 jagged 2 0.448064
APOF apolipoprotein F 0.443923
PPP2CA protein phosphatase 2, catalytic subunit, alpha isozyme 0.440162
WWOX WW domain containing oxidoreductase 0.428516
SP7 Sp7 transcription factor 0.42739
CD2 CD2 molecule 0.421765
S100A6 S100 calcium binding protein A6 0.410161
MAP1LC3B microtubule-associated protein 1 light chain 3 beta 0.40008
PTGS2 prostaglandin-endoperoxide synthase 2 (prostaglandin G/H synthase and cyclooxygenase) 0.374438
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent) 0.372587
IBSP integrin-binding sialoprotein 0.372587
PTH parathyroid hormone 0.371107
MN1 meningioma (disrupted in balanced translocation) 1 0.365932
ERN1 endoplasmic reticulum to nucleus signaling 1 0.355604
AXIN1 axin 1 0.340173
TP63 tumor protein p63 0.304503
PCNA proliferating cell nuclear antigen 0.297651
GNA15 guanine nucleotide binding protein (G protein), alpha 15 (Gq class) 0.293334
ATIC 5-aminoimidazole-4-carboxamide ribonucleotide formyltransferase/IMP cyclohydrolase 0.274732
PGRMC1 progesterone receptor membrane component 1 0.273664
HBA2 hemoglobin, alpha 2 0.27153
HSPA8 heat shock 70kDa protein 8 0.266558
GNA11 guanine nucleotide binding protein (G protein), alpha 11 (Gq class) 0.266203
TES testin LIM domain protein 0.26514
CD34 CD34 molecule 0.261952
TP53 tumor protein p53 0.261245
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.257005
S100A4 S100 calcium binding protein A4 0.254183
SPP1 secreted phosphoprotein 1 0.251366
ARSH arylsulfatase family, member H 0.247852
SDC1 syndecan 1 0.240847
CLDN1 claudin 1 0.206913
JAG1 jagged 1 0.203275
CLDN7 claudin 7 0.195183
SOX9 SRY (sex determining region Y)-box 9 0.187113
EZR ezrin 0.185612
VIM vimentin 0.175146
ATXN3 ataxin 3 0.171785
NOTCH1 notch 1 0.166544
CTSK cathepsin K 0.165217
ERBB4 erb-b2 receptor tyrosine kinase 4 0.163317
DDIT3 DNA-damage-inducible transcript 3 0.161912
S100A9 S100 calcium binding protein A9 0.160574
ENO2 enolase 2 (gamma, neuronal) 0.144371
APBA3 amyloid beta (A4) precursor protein-binding, family A, member 3 0.143415
MAPK14 mitogen-activated protein kinase 14 0.14331
SYP synaptophysin 0.14321
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5 0.142294
MARCH7 membrane-associated ring finger (C3HC4) 7, E3 ubiquitin protein ligase 0.141055
MNT MAX network transcriptional repressor 0.140246
KITLG KIT ligand 0.140181
B3GAT1 beta-1,3-glucuronyltransferase 1 0.13954
AMELY amelogenin, Y-linked 0.138295
AMELX amelogenin, X-linked 0.137729
AFP alpha-fetoprotein 0.137607
EDN3 endothelin 3 0.136446
CD99 CD99 molecule 0.134854
CHGA chromogranin A 0.134666
AGO2 argonaute RISC catalytic component 2 0.133334
MYOG myogenin (myogenic factor 4) 0.133322
HBA1 hemoglobin, alpha 1 0.133086
DBH dopamine beta-hydroxylase (dopamine beta-monooxygenase) 0.132449
F3 coagulation factor III (thromboplastin, tissue factor) 0.132367
F2 coagulation factor II (thrombin) 0.128449
GFAP glial fibrillary acidic protein 0.12586
DNM2 dynamin 2 0.125386
THBS1 thrombospondin 1 0.125216
SMAD3 SMAD family member 3 0.124392
S100B S100 calcium binding protein B 0.123975
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 0.123791
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.123765
NOTCH3 notch 3 0.122
PTGS1 prostaglandin-endoperoxide synthase 1 (prostaglandin G/H synthase and cyclooxygenase) 0.120691
CDH2 cadherin 2, type 1, N-cadherin (neuronal) 0.119819
NOTCH4 notch 4 0.119587
SMAD2 SMAD family member 2 0.11415
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase 0.113819
KRT7 keratin 7, type II 0.111416