benign glioma Gene Set

Dataset DISEASES Text-mining Gene-Disease Assocation Evidence Scores
Category disease or phenotype associations
Type disease
Description A cell type benign neoplasm that has_material_basis_in glial cells. (Human Disease Ontology, DOID_0060101)
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Genes

88 genes co-occuring with the disease benign glioma in abstracts of biomedical publications from the DISEASES Text-mining Gene-Disease Assocation Evidence Scores dataset.

Symbol Name Standardized Value
TSC2 tuberous sclerosis 2 1.71317
GFAP glial fibrillary acidic protein 1.6507
MTOR mechanistic target of rapamycin (serine/threonine kinase) 1.54893
SYP synaptophysin 1.4856
TSC1 tuberous sclerosis 1 1.40614
ENO2 enolase 2 (gamma, neuronal) 1.32978
KIF3C kinesin family member 3C 1.12277
OLIG2 oligodendrocyte lineage transcription factor 2 1.05892
RBFOX3 RNA binding protein, fox-1 homolog (C. elegans) 3 1.0442
KIF1C kinesin family member 1C 1.03577
KIF21B kinesin family member 21B 1.01807
NPTX1 neuronal pentraxin I 0.879424
NF2 neurofibromin 2 (merlin) 0.848716
DPYSL3 dihydropyrimidinase-like 3 0.767985
RND3 Rho family GTPase 3 0.736649
SCGN secretagogin, EF-hand calcium binding protein 0.699517
POLE polymerase (DNA directed), epsilon, catalytic subunit 0.668742
FBXO42 F-box protein 42 0.647743
CHGA chromogranin A 0.628457
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein) 0.606152
ACP2 acid phosphatase 2, lysosomal 0.60069
FABP7 fatty acid binding protein 7, brain 0.594843
KCNJ3 potassium channel, inwardly rectifying subfamily J, member 3 0.585497
NES nestin 0.514186
S100A11 S100 calcium binding protein A11 0.503058
NRCAM neuronal cell adhesion molecule 0.480186
GPNMB glycoprotein (transmembrane) nmb 0.477151
HOXB13 homeobox B13 0.476393
CALB1 calbindin 1, 28kDa 0.440162
VIM vimentin 0.423265
SFRP4 secreted frizzled-related protein 4 0.42139
ADGRV1 adhesion G protein-coupled receptor V1 0.416147
NEFL neurofilament, light polypeptide 0.405678
RHEB Ras homolog enriched in brain 0.401199
IDH2 isocitrate dehydrogenase 2 (NADP+), mitochondrial 0.353763
HGS hepatocyte growth factor-regulated tyrosine kinase substrate 0.346042
FANCL Fanconi anemia, complementation group L 0.338341
FKBP1A FK506 binding protein 1A, 12kDa 0.329565
TP53 tumor protein p53 0.318272
MAP2 microtubule-associated protein 2 0.313552
LGALS3 lectin, galactoside-binding, soluble, 3 0.296571
S100P S100 calcium binding protein P 0.279011
EGFR epidermal growth factor receptor 0.26266
AURKB aurora kinase B 0.25207
GRIA1 glutamate receptor, ionotropic, AMPA 1 0.248554
GLI2 GLI family zinc finger 2 0.231795
NPY neuropeptide Y 0.227642
SDF4 stromal cell derived factor 4 0.225573
RPS6 ribosomal protein S6 0.212945
FGF19 fibroblast growth factor 19 0.209918
B3GAT1 beta-1,3-glucuronyltransferase 1 0.192657
ANXA1 annexin A1 0.188938
CD34 CD34 molecule 0.171785
PXN paxillin 0.164786
PKD1P6 polycystic kidney disease 1 (autosomal dominant) pseudogene 6 0.164359
DCX doublecortin 0.129671
TTR transthyretin 0.128084
MAP4 microtubule-associated protein 4 0.127681
MBP myelin basic protein 0.127404
CRYAB crystallin, alpha B 0.12739
KRT18 keratin 18, type I 0.126908
SAG S-antigen; retina and pineal gland (arrestin) 0.126259
GAST gastrin 0.125845
EIF4EBP1 eukaryotic translation initiation factor 4E binding protein 1 0.125687
GLS2 glutaminase 2 (liver, mitochondrial) 0.125402
CDK1 cyclin-dependent kinase 1 0.12373
PKD1 polycystic kidney disease 1 (autosomal dominant) 0.123459
SOX2 SRY (sex determining region Y)-box 2 0.123423
LGALS1 lectin, galactoside-binding, soluble, 1 0.123223
RPS6KB1 ribosomal protein S6 kinase, 70kDa, polypeptide 1 0.122397
MIB1 mindbomb E3 ubiquitin protein ligase 1 0.122203
CA2 carbonic anhydrase II 0.119323
F8 coagulation factor VIII, procoagulant component 0.118522
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.118428
MEN1 multiple endocrine neoplasia I 0.116123
KRT8 keratin 8, type II 0.115994
KRT20 keratin 20, type I 0.11478
CFH complement factor H 0.111943
CDH1 cadherin 1, type 1, E-cadherin (epithelial) 0.111913
KRT5 keratin 5, type II 0.11048
KRT7 keratin 7, type II 0.110108
PDGFRA platelet-derived growth factor receptor, alpha polypeptide 0.109055
MYCN v-myc avian myelocytomatosis viral oncogene neuroblastoma derived homolog 0.10853
AFP alpha-fetoprotein 0.106264
ITGA2 integrin, alpha 2 (CD49B, alpha 2 subunit of VLA-2 receptor) 0.105172
BCR breakpoint cluster region 0.104233
MAPT microtubule-associated protein tau 0.103942
CD68 CD68 molecule 0.09945