basal part of cell Gene Set

Dataset COMPARTMENTS Text-mining Protein Localization Evidence Scores
Category structural or functional annotations
Type cellular component
Description The region of a cell situated near the base. For example, in a polarized epithelial cell, the basal surface rests on the basal lamina that separates the epithelium from other tissue. (Gene Ontology, GO_0045178)
Similar Terms
Downloads & Tools

Genes

97 proteins co-occuring with the basal part of cell cellular component in abstracts of biomedical publications from the COMPARTMENTS Text-mining Protein Localization Evidence Scores dataset.

Symbol Name Standardized Value
NUMB numb homolog (Drosophila) 1.00991
GNL1 guanine nucleotide binding protein-like 1 0.908785
DNAH8 dynein, axonemal, heavy chain 8 0.786444
GNL2 guanine nucleotide binding protein-like 2 (nucleolar) 0.688576
CCDC34 coiled-coil domain containing 34 0.621379
ALPPL2 alkaline phosphatase, placental-like 2 0.613742
ALPL alkaline phosphatase, liver/bone/kidney 0.612895
ALPP alkaline phosphatase, placental 0.612471
MST1R macrophage stimulating 1 receptor 0.612471
AQP7 aquaporin 7 0.598538
STAU1 staufen double-stranded RNA binding protein 1 0.580504
VCL vinculin 0.574244
SLC27A5 solute carrier family 27 (fatty acid transporter), member 5 0.558457
PTH parathyroid hormone 0.544823
FN1 fibronectin 1 0.542764
COL7A1 collagen, type VII, alpha 1 0.532078
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1 0.51164
SLC2A1 solute carrier family 2 (facilitated glucose transporter), member 1 0.509604
INS insulin 0.473215
APC adenomatous polyposis coli 0.465998
SLC38A1 solute carrier family 38, member 1 0.465998
PTHLH parathyroid hormone-like hormone 0.465198
FLOT2 flotillin 2 0.459602
P2RX4 purinergic receptor P2X, ligand gated ion channel, 4 0.446069
DST dystonin 0.443689
CDCP1 CUB domain containing protein 1 0.443292
FTL ferritin, light polypeptide 0.4425
FTH1 ferritin, heavy polypeptide 1 0.44052
ENPEP glutamyl aminopeptidase (aminopeptidase A) 0.417294
KCNA5 potassium channel, voltage gated shaker related subfamily A, member 5 0.412601
ANK2 ankyrin 2, neuronal 0.399363
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2 0.387365
TBC1D4 TBC1 domain family, member 4 0.385051
CLDN6 claudin 6 0.38428
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor) 0.381584
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1) 0.378122
KCNG1 potassium channel, voltage gated modifier subfamily G, member 1 0.372366
RAB7A RAB7A, member RAS oncogene family 0.35899
SLC25A18 solute carrier family 25 (glutamate carrier), member 18 0.350243
RARA retinoic acid receptor, alpha 0.346071
MAPRE1 microtubule-associated protein, RP/EB family, member 1 0.332472
USP1 ubiquitin specific peptidase 1 0.330589
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3 0.3227
AQP5 aquaporin 5 0.318205
CD44 CD44 molecule (Indian blood group) 0.316708
CDKN2A cyclin-dependent kinase inhibitor 2A 0.313718
ATP11A ATPase, class VI, type 11A 0.308494
P2RY6 pyrimidinergic receptor P2Y, G-protein coupled, 6 0.297713
COL14A1 collagen, type XIV, alpha 1 0.292157
SETD7 SET domain containing (lysine methyltransferase) 7 0.290308
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4 0.288091
FERMT2 fermitin family member 2 0.274468
CALCA calcitonin-related polypeptide alpha 0.273
BCAM basal cell adhesion molecule (Lutheran blood group) 0.272633
GRIK4 glutamate receptor, ionotropic, kainate 4 0.2719
SLC2A2 solute carrier family 2 (facilitated glucose transporter), member 2 0.266774
SPTBN4 spectrin, beta, non-erythrocytic 4 0.266408
SLC38A2 solute carrier family 38, member 2 0.260566
GGT1 gamma-glutamyltransferase 1 0.256561
ITGA6 integrin, alpha 6 0.25547
P2RX1 purinergic receptor P2X, ligand gated ion channel, 1 0.242076
CAV1 caveolin 1, caveolae protein, 22kDa 0.227041
GUCY2C guanylate cyclase 2C 0.226331
UPK3A uroplakin 3A 0.224913
C3 complement component 3 0.223497
SLC4A1 solute carrier family 4 (anion exchanger), member 1 (Diego blood group) 0.220673
NPR1 natriuretic peptide receptor 1 0.218914
UTRN utrophin 0.215761
COL17A1 collagen, type XVII, alpha 1 0.215761
FOLR1 folate receptor 1 (adult) 0.215412
CHRM2 cholinergic receptor, muscarinic 2 0.206082
CLEC3B C-type lectin domain family 3, member B 0.205059
CD79A CD79a molecule, immunoglobulin-associated alpha 0.194371
SERPINA2 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 2 (gene/pseudogene) 0.194371
SLC3A1 solute carrier family 3 (amino acid transporter heavy chain), member 1 0.194045
NT5E 5'-nucleotidase, ecto (CD73) 0.193719
AVPR2 arginine vasopressin receptor 2 0.190814
RNGTT RNA guanylyltransferase and 5'-phosphatase 0.190495
ITGB1 integrin, beta 1 (fibronectin receptor, beta polypeptide, antigen CD29 includes MDF2, MSK12) 0.189222
CAV3 caveolin 3 0.18702
TRPV6 transient receptor potential cation channel, subfamily V, member 6 0.184547
SPTBN1 spectrin, beta, non-erythrocytic 1 0.183935
KLK1 kallikrein 1 0.178877
TRPV5 transient receptor potential cation channel, subfamily V, member 5 0.178011
DPP7 dipeptidyl-peptidase 7 0.177724
AQP8 aquaporin 8 0.177154
AQP4 aquaporin 4 0.175745
AANAT aralkylamine N-acetyltransferase 0.175188
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1 0.172201
SERPINB8 serpin peptidase inhibitor, clade B (ovalbumin), member 8 0.168847
ICAM2 intercellular adhesion molecule 2 0.167611
DMRTA1 DMRT-like family A1 0.166643
KRT13 keratin 13, type I 0.166167
SLC16A4 solute carrier family 16, member 4 0.163865
AQP2 aquaporin 2 (collecting duct) 0.162763
CDC16 cell division cycle 16 0.157397
MGAM maltase-glucoamylase 0.157039