basal ganglion Gene Set

Dataset TISSUES Experimental Tissue Protein Expression Evidence Scores
Category proteomics
Type tissue
Description Any of four deeply placed masses of gray matter (as the amygdala) in each cerebral hemisphere. Location: The basal ganglion is located deep within the cerebral hemispheres in the telencephalon region of the brain. It consists of the corpus stratium, subthalamic nucleus and the substantia nigra. (BRENDA Tissue and Enzyme Source Ontology, BTO_0000235)
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Genes

116 proteins highly expressed in the tissue basal ganglion in proteomics datasets from the TISSUES Experimental Tissue Protein Expression Evidence Scores dataset.

Symbol Name Standardized Value
RPL41 ribosomal protein L41 0.766457
APOD apolipoprotein D 0.766457
RPL34 ribosomal protein L34 0.766457
RPL32 ribosomal protein L32 0.766457
RPL30 ribosomal protein L30 0.766457
FTH1 ferritin, heavy polypeptide 1 0.766457
PCP4 Purkinje cell protein 4 0.766457
RTN4 reticulon 4 0.766457
RPL9 ribosomal protein L9 0.766457
SPARCL1 SPARC-like 1 (hevin) 0.766457
UBC ubiquitin C 0.766457
EIF4A2 eukaryotic translation initiation factor 4A2 0.766457
RPS18 ribosomal protein S18 0.766457
RPS15 ribosomal protein S15 0.766457
NUP210L nucleoporin 210kDa-like 0.766457
CLU clusterin 0.766457
CRYAB crystallin, alpha B 0.766457
PLP1 proteolipid protein 1 0.766457
NRGN neurogranin (protein kinase C substrate, RC3) 0.766457
RPL39 ribosomal protein L39 0.766457
UBB ubiquitin B 0.766457
RPS11 ribosomal protein S11 0.766457
TMSB10 thymosin beta 10 0.766457
TMEM54 transmembrane protein 54 0.766457
MBP myelin basic protein 0.766457
GFAP glial fibrillary acidic protein 0.766457
RPS27A ribosomal protein S27a 0.766457
CALM1 calmodulin 1 (phosphorylase kinase, delta) 0.766457
HSP90AA1 heat shock protein 90kDa alpha (cytosolic), class A member 1 0.766457
TPT1 tumor protein, translationally-controlled 1 0.766457
TMSB4XP8 thymosin beta 4, X-linked pseudogene 8 0.766457
USP48 ubiquitin specific peptidase 48 0.766457
TUBA1A tubulin, alpha 1a 0.766457
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase 0.766457
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme 0.766457
ARPP21 cAMP-regulated phosphoprotein, 21kDa 0.766457
EML6 echinoderm microtubule associated protein like 6 0.766457
PPP1R1B protein phosphatase 1, regulatory (inhibitor) subunit 1B 0.766457
CALM2 calmodulin 2 (phosphorylase kinase, delta) 0.766457
COX6A1 cytochrome c oxidase subunit VIa polypeptide 1 0.766457
TMSB4X thymosin beta 4, X-linked 0.766457
RPS29 ribosomal protein S29 0.766457
RPS23 ribosomal protein S23 0.766457
RPS24 ribosomal protein S24 0.766457
RPL27A ribosomal protein L27a 0.766457
RPL37A ribosomal protein L37a 0.766457
NGFRAP1 nerve growth factor receptor (TNFRSF16) associated protein 1 0.766457
C1ORF56 chromosome 1 open reading frame 56 0.23362
PGAM4 phosphoglycerate mutase family member 4 0.23362
MATR3 matrin 3 0.23362
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein) 0.23362
RTN3 reticulon 3 0.23362
MDH1 malate dehydrogenase 1, NAD (soluble) 0.23362
JUND jun D proto-oncogene 0.23362
SEPT7 septin 7 0.23362
TTR transthyretin 0.23362
DSTN destrin (actin depolymerizing factor) 0.23362
GPM6B glycoprotein M6B 0.23362
GPM6A glycoprotein M6A 0.23362
CST3 cystatin C 0.23362
NGRN neugrin, neurite outgrowth associated 0.23362
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme 0.23362
BPHL biphenyl hydrolase-like (serine hydrolase) 0.23362
REC114 REC114 meiotic recombination protein 0.23362
MORF4L2 mortality factor 4 like 2 0.23362
STXBP1 syntaxin binding protein 1 0.23362
KIF5C kinesin family member 5C 0.23362
SRP9 signal recognition particle 9kDa 0.23362
EEF2 eukaryotic translation elongation factor 2 0.23362
GJA1 gap junction protein, alpha 1, 43kDa 0.23362
RETSAT retinol saturase (all-trans-retinol 13,14-reductase) 0.23362
SARAF store-operated calcium entry-associated regulatory factor 0.23362
MT3 metallothionein 3 0.23362
NME7 NME/NM23 family member 7 0.23362
CALM3 calmodulin 3 (phosphorylase kinase, delta) 0.23362
SNX32 sorting nexin 32 0.23362
PEBP1 phosphatidylethanolamine binding protein 1 0.23362
SERINC1 serine incorporator 1 0.23362
OAZ1 ornithine decarboxylase antizyme 1 0.23362
ITM2B integral membrane protein 2B 0.23362
QDPR quinoid dihydropteridine reductase 0.23362
B2M beta-2-microglobulin 0.23362
PSAP prosaposin 0.23362
SOD1 superoxide dismutase 1, soluble 0.23362
DYNLL1 dynein, light chain, LC8-type 1 0.23362
BEX1 brain expressed, X-linked 1 0.23362
RTN1 reticulon 1 0.23362
PFN2 profilin 2 0.23362
BASP1 brain abundant, membrane attached signal protein 1 0.23362
YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta 0.23362
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta 0.23362
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta 0.23362
RSF1 remodeling and spacing factor 1 0.23362
ATP5A1 ATP synthase, H+ transporting, mitochondrial F1 complex, alpha subunit 1, cardiac muscle 0.23362
CHN1 chimerin 1 0.23362
CPE carboxypeptidase E 0.23362
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1) 0.23362
ISCU iron-sulfur cluster assembly enzyme 0.23362
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 0.23362
TSC22D1 TSC22 domain family, member 1 0.23362
NDUFA4 NDUFA4, mitochondrial complex associated 0.23362
MOAP1 modulator of apoptosis 1 0.23362
SNAP25 synaptosomal-associated protein, 25kDa 0.23362
PGAM1 phosphoglycerate mutase 1 (brain) 0.23362
DPYSL2 dihydropyrimidinase-like 2 0.23362
NEFL neurofilament, light polypeptide 0.23362
PRNP prion protein 0.23362
SKP1 S-phase kinase-associated protein 1 0.23362
ATP6V0C ATPase, H+ transporting, lysosomal 16kDa, V0 subunit c 0.23362
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1 0.23362
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha 0.23362
NDFIP1 Nedd4 family interacting protein 1 0.23362
CAMK2N1 calcium/calmodulin-dependent protein kinase II inhibitor 1 0.23362
UCHL1 ubiquitin carboxyl-terminal esterase L1 (ubiquitin thiolesterase) 0.23362
RPLP1 ribosomal protein, large, P1 0.23362
VSNL1 visinin-like 1 0.067475