basal ganglia disease Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:679
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Genes

67 genes associated with the disease basal ganglia disease in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
PSMA4 proteasome (prosome, macropain) subunit, alpha type, 4 2.26248
PLA2G3 phospholipase A2, group III 2.25657
PIGQ phosphatidylinositol glycan anchor biosynthesis, class Q 2.17705
NVL nuclear VCP-like 2.16981
ZC3H3 zinc finger CCCH-type containing 3 2.15797
DNAJC6 DnaJ (Hsp40) homolog, subfamily C, member 6 2.12956
LRPAP1 low density lipoprotein receptor-related protein associated protein 1 2.12326
BTN2A1 butyrophilin, subfamily 2, member A1 2.11
PSMB4 proteasome (prosome, macropain) subunit, beta type, 4 2.06978
JPH3 junctophilin 3 2.06868
CUL9 cullin 9 2.0596
VOPP1 vesicular, overexpressed in cancer, prosurvival protein 1 2.04902
CCT2 chaperonin containing TCP1, subunit 2 (beta) 2.03539
NCOR2 nuclear receptor corepressor 2 2.03099
TRDMT1 tRNA aspartic acid methyltransferase 1 2.01272
OSGIN1 oxidative stress induced growth inhibitor 1 1.94711
GYLTL1B glycosyltransferase-like 1B 1.94616
TCF25 transcription factor 25 (basic helix-loop-helix) 1.94277
CST2 cystatin SA 1.93043
CXCL12 chemokine (C-X-C motif) ligand 12 1.92974
LTBP2 latent transforming growth factor beta binding protein 2 1.92727
CPLX2 complexin 2 1.90581
IVD isovaleryl-CoA dehydrogenase 1.89676
UHRF1 ubiquitin-like with PHD and ring finger domains 1 1.88688
COL4A2 collagen, type IV, alpha 2 1.8787
LZTR1 leucine-zipper-like transcription regulator 1 1.87603
TAF4 TAF4 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 135kDa 1.87221
TSPAN9 tetraspanin 9 1.87074
DIDO1 death inducer-obliterator 1 1.86468
SPTBN4 spectrin, beta, non-erythrocytic 4 1.85913
TRAPPC9 trafficking protein particle complex 9 1.85744
ALDH1L1 aldehyde dehydrogenase 1 family, member L1 1.84922
SBF1 SET binding factor 1 1.84112
ERGIC1 endoplasmic reticulum-golgi intermediate compartment (ERGIC) 1 1.83805
SORCS2 sortilin-related VPS10 domain containing receptor 2 1.83623
ITPK1 inositol-tetrakisphosphate 1-kinase 1.82704
NUP210 nucleoporin 210kDa 1.8199
FUT7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase) 1.8074
ACSS1 acyl-CoA synthetase short-chain family member 1 1.8017
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome 1.79839
TFF1 trefoil factor 1 1.78856
EMC8 ER membrane protein complex subunit 8 1.78662
MARCH10 membrane-associated ring finger (C3HC4) 10, E3 ubiquitin protein ligase 1.7849
IRF5 interferon regulatory factor 5 1.77455
CLEC16A C-type lectin domain family 16, member A 1.75944
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta) 1.75573
ILF3 interleukin enhancer binding factor 3, 90kDa 1.75369
COL13A1 collagen, type XIII, alpha 1 1.74398
PTPRN2 protein tyrosine phosphatase, receptor type, N polypeptide 2 1.73782
EIF2AK1 eukaryotic translation initiation factor 2-alpha kinase 1 1.7343
SPTBN5 spectrin, beta, non-erythrocytic 5 1.7141
PML promyelocytic leukemia 1.71093
ABCC1 ATP-binding cassette, sub-family C (CFTR/MRP), member 1 1.67093
LAMA3 laminin, alpha 3 1.66022
WNK2 WNK lysine deficient protein kinase 2 1.63004
SLC7A8 solute carrier family 7 (amino acid transporter light chain, L system), member 8 1.57648
MAPKAP1 mitogen-activated protein kinase associated protein 1 1.54733
SEMA3F sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3F 1.50593
BIN1 bridging integrator 1 1.49451
TP73 tumor protein p73 1.46748
PITRM1 pitrilysin metallopeptidase 1 1.45547
GPR160 G protein-coupled receptor 160 1.43417
NDST1 N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 1 1.38272
RGS12 regulator of G-protein signaling 12 1.35242
SEPT9 septin 9 1.34112
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2 1.32386
ATL1 atlastin GTPase 1 1.32334