autoimmune disease of the nervous system Gene Set

Dataset GWASdb SNP-Disease Associations
Category disease or phenotype associations
Type disease
External Link http://jjwanglab.org/gwasdb/gwasdb2/gwasdb2/go_trait/DOID:438
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Genes

91 genes associated with the disease autoimmune disease of the nervous system in GWAS and other genetic association datasets from the GWASdb SNP-Disease Associations dataset.

Symbol Name Standardized Value
TCF19 transcription factor 19 2.98502
MSH5 mutS homolog 5 2.91718
C2 complement component 2 2.90258
CFB complement factor B 2.88192
STK19 serine/threonine kinase 19 2.87646
C6ORF10 chromosome 6 open reading frame 10 2.83889
DPCR1 diffuse panbronchiolitis critical region 1 2.79178
BTNL2 butyrophilin-like 2 2.78329
VARS2 valyl-tRNA synthetase 2, mitochondrial 2.76216
C6ORF15 chromosome 6 open reading frame 15 2.75829
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 2.75227
GPANK1 G patch domain and ankyrin repeats 1 2.74654
PRRC2A proline-rich coiled-coil 2A 2.7438
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1 2.71408
HCG18 HLA complex group 18 (non-protein coding) 2.6993
NOTCH4 notch 4 2.6791
MUC22 mucin 22 2.67678
TRIM31 tripartite motif containing 31 2.67579
MUC21 mucin 21, cell surface associated 2.6663
RNF39 ring finger protein 39 2.64752
POU5F1 POU class 5 homeobox 1 2.63815
ZNRD1 zinc ribbon domain containing 1 2.63426
PSORS1C1 psoriasis susceptibility 1 candidate 1 2.62957
HCG9 HLA complex group 9 (non-protein coding) 2.61485
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding) 2.57828
MICB MHC class I polypeptide-related sequence B 2.57397
GPSM3 G-protein signaling modulator 3 2.54382
TNIP1 TNFAIP3 interacting protein 1 1.54533
LOC100506023 uncharacterized LOC100506023 0.991428
IKZF3 IKAROS family zinc finger 3 (Aiolos) 0.912987
TRAF3 TNF receptor-associated factor 3 0.869084
DTNBP1 dystrobrevin binding protein 1 0.853791
SGCZ sarcoglycan, zeta 0.82729
GSDMB gasdermin B 0.801304
TNPO3 transportin 3 0.794247
RORA RAR-related orphan receptor A 0.772631
FAM159A family with sequence similarity 159, member A 0.772631
ZPBP2 zona pellucida binding protein 2 0.738669
SEC22A SEC22 vesicle trafficking protein homolog A (S. cerevisiae) 0.689554
NTF3 neurotrophin 3 0.683452
KALRN kalirin, RhoGEF kinase 0.67359
LRRK2 leucine-rich repeat kinase 2 0.659337
PLEKHG5 pleckstrin homology domain containing, family G (with RhoGef domain) member 5 0.659337
MEGF11 multiple EGF-like-domains 11 0.644215
ZNF667 zinc finger protein 667 0.638972
RASSF2 Ras association (RalGDS/AF-6) domain family member 2 0.629714
PLCL1 phospholipase C-like 1 0.629714
CORO1C coronin, actin binding protein, 1C 0.629714
NUF2 NUF2, NDC80 kinetochore complex component 0.625701
MTSS1 metastasis suppressor 1 0.621951
NKAIN3 Na+/K+ transporting ATPase interacting 3 0.621951
MAMLD1 mastermind-like domain containing 1 0.618434
IVD isovaleryl-CoA dehydrogenase 0.618434
ROR1 receptor tyrosine kinase-like orphan receptor 1 0.615118
ANK1 ankyrin 1, erythrocytic 0.615118
PTPN22 protein tyrosine phosphatase, non-receptor type 22 (lymphoid) 0.60243
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae) 0.60243
RSBN1 round spermatid basic protein 1 0.596808
BARX2 BARX homeobox 2 0.594024
ADCY5 adenylate cyclase 5 0.591358
STARD3 StAR-related lipid transfer (START) domain containing 3 0.588801
CSN1S2BP casein alpha s2-like B, pseudogene 0.588801
SLIT3 slit homolog 3 (Drosophila) 0.586345
EDA ectodysplasin A 0.583982
SLC39A11 solute carrier family 39, member 11 0.583982
SH3GLB2 SH3-domain GRB2-like endophilin B2 0.581707
CNTN5 contactin 5 0.574821
CAMKMT calmodulin-lysine N-methyltransferase 0.574821
IDO2 indoleamine 2,3-dioxygenase 2 0.572673
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 0.572673
NPAS3 neuronal PAS domain protein 3 0.570595
GNA14 guanine nucleotide binding protein (G protein), alpha 14 0.568581
PHTF1 putative homeodomain transcription factor 1 0.568581
TOX thymocyte selection-associated high mobility group box 0.566629
KIAA1549 KIAA1549 0.564734
STAT4 signal transducer and activator of transcription 4 0.560918
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1 0.560918
KCNAB1 potassium channel, voltage gated subfamily A regulatory beta subunit 1 0.559045
TBX5 T-box 5 0.557222
NKX2-3 NK2 homeobox 3 0.557222
PDE4D phosphodiesterase 4D, cAMP-specific 0.555448
ANKRD55 ankyrin repeat domain 55 0.555448
RAPGEF4 Rap guanine nucleotide exchange factor (GEF) 4 0.55372
SCAMP5 secretory carrier membrane protein 5 0.55372
CTNNA3 catenin (cadherin-associated protein), alpha 3 0.552035
INADL InaD-like (Drosophila) 0.550393
BCL2L15 BCL2-like 15 0.550393
VAC14 Vac14 homolog (S. cerevisiae) 0.550393
FGD5 FYVE, RhoGEF and PH domain containing 5 0.54879
CD226 CD226 molecule 0.54879
TCAP titin-cap 0.54879