alar plate of p2 (alar thalamus) Gene Set

Dataset Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles
Category transcriptomics
Type tissue
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Genes

280 genes with high or low expression in alar plate of p2 (alar thalamus) relative to other tissues from the Allen Brain Atlas Adult Mouse Brain Tissue Gene Expression Profiles dataset.

high expression

Symbol Name Standardized Value
GJC1 gap junction protein, gamma 1, 45kDa 1.50497
IFNB1 interferon, beta 1, fibroblast 1.49537
ADARB2 adenosine deaminase, RNA-specific, B2 (non-functional) 1.44483
SYT9 synaptotagmin IX 1.4407
RAMP3 receptor (G protein-coupled) activity modifying protein 3 1.43455
EXTL3 exostosin-like glycosyltransferase 3 1.43352
ABHD12B abhydrolase domain containing 12B 1.4316
SLC35E2B solute carrier family 35, member E2B 1.42998
MRVI1 murine retrovirus integration site 1 homolog 1.4247
EML3 echinoderm microtubule associated protein like 3 1.42289
MB21D2 Mab-21 domain containing 2 1.41044
PTPN4 protein tyrosine phosphatase, non-receptor type 4 (megakaryocyte) 1.39965
TMEM131 transmembrane protein 131 1.38996
PRKCD protein kinase C, delta 1.38686
ERO1LB ERO1-like beta (S. cerevisiae) 1.38453
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1 1.3811
SOCS6 suppressor of cytokine signaling 6 1.37262
FRYL FRY-like 1.36953
SH3D19 SH3 domain containing 19 1.36691
LEF1 lymphoid enhancer-binding factor 1 1.36668
LRTM2 leucine-rich repeats and transmembrane domains 2 1.36652
TTC19 tetratricopeptide repeat domain 19 1.34157
GPR12 G protein-coupled receptor 12 1.34117
TLN2 talin 2 1.33884
FAM19A4 family with sequence similarity 19 (chemokine (C-C motif)-like), member A4 1.33779
NSMF NMDA receptor synaptonuclear signaling and neuronal migration factor 1.33391
FLNB filamin B, beta 1.33348
FHDC1 FH2 domain containing 1 1.32238
DDAH1 dimethylarginine dimethylaminohydrolase 1 1.3202
GABRA4 gamma-aminobutyric acid (GABA) A receptor, alpha 4 1.31994
ADARB1 adenosine deaminase, RNA-specific, B1 1.31746
PTPN3 protein tyrosine phosphatase, non-receptor type 3 1.31478
RAB37 RAB37, member RAS oncogene family 1.31175
NUP37 nucleoporin 37kDa 1.30877
CCDC136 coiled-coil domain containing 136 1.30677
PEAK1 pseudopodium-enriched atypical kinase 1 1.30564
SPTLC2 serine palmitoyltransferase, long chain base subunit 2 1.29993
NTNG1 netrin G1 1.29603
MYO5A myosin VA (heavy chain 12, myoxin) 1.29557
LHFP lipoma HMGIC fusion partner 1.29339
GABBR2 gamma-aminobutyric acid (GABA) B receptor, 2 1.2926
KCNC2 potassium channel, voltage gated Shaw related subfamily C, member 2 1.29236
GSS glutathione synthetase 1.2835
MCU mitochondrial calcium uniporter 1.28188
XYLT2 xylosyltransferase II 1.27824
SECISBP2L SECIS binding protein 2-like 1.27316
GPR151 G protein-coupled receptor 151 1.26687
LAMC3 laminin, gamma 3 1.26273
TNNT1 troponin T type 1 (skeletal, slow) 1.25986
ZMAT4 zinc finger, matrin-type 4 1.25898
SAMD5 sterile alpha motif domain containing 5 1.25406
KIAA1644 KIAA1644 1.25258
ADAMTS19 ADAM metallopeptidase with thrombospondin type 1 motif, 19 1.2514
GDPD5 glycerophosphodiester phosphodiesterase domain containing 5 1.25061
VANGL1 VANGL planar cell polarity protein 1 1.24943
BOK BCL2-related ovarian killer 1.24786
MRPS28 mitochondrial ribosomal protein S28 1.24698
RGS16 regulator of G-protein signaling 16 1.24206
AIM1 absent in melanoma 1 1.23707
AMOTL1 angiomotin like 1 1.22355
IYD iodotyrosine deiodinase 1.22345
GDF11 growth differentiation factor 11 1.22105
AGFG1 ArfGAP with FG repeats 1 1.21965
RORA RAR-related orphan receptor A 1.21729
CACNA1C calcium channel, voltage-dependent, L type, alpha 1C subunit 1.21423
ANAPC7 anaphase promoting complex subunit 7 1.20923
ADGRA1 adhesion G protein-coupled receptor A1 1.20671
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1 1.20594
ZNF804A zinc finger protein 804A 1.20443
PPP4R4 protein phosphatase 4, regulatory subunit 4 1.20426
KDM3B lysine (K)-specific demethylase 3B 1.20416
CLMN calmin (calponin-like, transmembrane) 1.20299
AFAP1 actin filament associated protein 1 1.20182
SLITRK6 SLIT and NTRK-like family, member 6 1.20141
RASL11A RAS-like, family 11, member A 1.20002
CRYBB3 crystallin, beta B3 1.19763
CHRNA4 cholinergic receptor, nicotinic, alpha 4 (neuronal) 1.19699
PDZD8 PDZ domain containing 8 1.1968
EML1 echinoderm microtubule associated protein like 1 1.19668
EPHA1 EPH receptor A1 1.19155
UROS uroporphyrinogen III synthase 1.18487
VWA3B von Willebrand factor A domain containing 3B 1.18482
RAB3C RAB3C, member RAS oncogene family 1.17482
CEND1 cell cycle exit and neuronal differentiation 1 1.17359
OSBPL5 oxysterol binding protein-like 5 1.17281
SHC1 SHC (Src homology 2 domain containing) transforming protein 1 1.16894
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa 1.1684
CNTN4 contactin 4 1.16518
CACNB2 calcium channel, voltage-dependent, beta 2 subunit 1.16344
TMEM56 transmembrane protein 56 1.16271
SLC25A37 solute carrier family 25 (mitochondrial iron transporter), member 37 1.16215
HRH3 histamine receptor H3 1.15859
NT5DC3 5'-nucleotidase domain containing 3 1.15747
RHOU ras homolog family member U 1.15633
C9ORF142 chromosome 9 open reading frame 142 1.15602
CTNNBIP1 catenin, beta interacting protein 1 1.15506
GRM1 glutamate receptor, metabotropic 1 1.154
ANKRD34C ankyrin repeat domain 34C 1.15263
FAM110B family with sequence similarity 110, member B 1.14495
LRRTM1 leucine rich repeat transmembrane neuronal 1 1.14339
LAMP2 lysosomal-associated membrane protein 2 1.14137
PPP2R5D protein phosphatase 2, regulatory subunit B', delta 1.1406
ESYT2 extended synaptotagmin-like protein 2 1.13872
MYO5C myosin VC 1.13832
AVPI1 arginine vasopressin-induced 1 1.13829
IFT57 intraflagellar transport 57 1.13563
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1 1.13505
GRID2IP glutamate receptor, ionotropic, delta 2 (Grid2) interacting protein 1.13072
IAH1 isoamyl acetate-hydrolyzing esterase 1 homolog (S. cerevisiae) 1.12966
ARL3 ADP-ribosylation factor-like 3 1.12903
TSPAN14 tetraspanin 14 1.12043
RHOB ras homolog family member B 1.11968
GPC1 glypican 1 1.11491
RAB4A RAB4A, member RAS oncogene family 1.11461
NEK1 NIMA-related kinase 1 1.11219
TCF7L2 transcription factor 7-like 2 (T-cell specific, HMG-box) 1.11066
ADGRF5 adhesion G protein-coupled receptor F5 1.1098
SHC3 SHC (Src homology 2 domain containing) transforming protein 3 1.10763
F2R coagulation factor II (thrombin) receptor 1.10453
KCNJ12 potassium channel, inwardly rectifying subfamily J, member 12 1.10059
GBE1 glucan (1,4-alpha-), branching enzyme 1 1.09551
WBSCR17 Williams-Beuren syndrome chromosome region 17 1.09419
PSTPIP1 proline-serine-threonine phosphatase interacting protein 1 1.094
ADAMTS15 ADAM metallopeptidase with thrombospondin type 1 motif, 15 1.09362
BOD1L1 biorientation of chromosomes in cell division 1-like 1 1.09296
PLCB4 phospholipase C, beta 4 1.09034
THEMIS thymocyte selection associated 1.09018
GLIPR2 GLI pathogenesis-related 2 1.08756
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1 1.08737
L1CAM L1 cell adhesion molecule 1.08662
CLVS2 clavesin 2 1.08539
SCUBE2 signal peptide, CUB domain, EGF-like 2 1.08531
ZDHHC22 zinc finger, DHHC-type containing 22 1.08408
NIN ninein (GSK3B interacting protein) 1.08328
PRKCH protein kinase C, eta 1.08319
NRIP3 nuclear receptor interacting protein 3 1.07984
IGF1R insulin-like growth factor 1 receptor 1.07685
GGT7 gamma-glutamyltransferase 7 1.07495
PMVK phosphomevalonate kinase 1.07494
SNX29 sorting nexin 29 1.0699
CCDC134 coiled-coil domain containing 134 1.0682
FRAS1 Fraser extracellular matrix complex subunit 1 1.06794
GPR4 G protein-coupled receptor 4 1.06715
ELMO1 engulfment and cell motility 1 1.06547
GLRX2 glutaredoxin 2 1.06435
C16ORF45 chromosome 16 open reading frame 45 1.05944
IL9R interleukin 9 receptor 1.05912
CREG1 cellular repressor of E1A-stimulated genes 1 1.0587
SLITRK3 SLIT and NTRK-like family, member 3 1.05791
GABRB2 gamma-aminobutyric acid (GABA) A receptor, beta 2 1.0579
OGFRL1 opioid growth factor receptor-like 1 1.05529
PPARD peroxisome proliferator-activated receptor delta 1.05357
GTF2IRD1 GTF2I repeat domain containing 1 1.05298
GABRD gamma-aminobutyric acid (GABA) A receptor, delta 1.05096
INPP5A inositol polyphosphate-5-phosphatase, 40kDa 1.05041
VAV2 vav 2 guanine nucleotide exchange factor 1.04952
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal) 1.04585
AKR1E2 aldo-keto reductase family 1, member E2 1.04546
CACNA1G calcium channel, voltage-dependent, T type, alpha 1G subunit 1.04349
OPN3 opsin 3 1.04287
LYPD6 LY6/PLAUR domain containing 6 1.04186
REV1 REV1, polymerase (DNA directed) 1.0417
MYO1B myosin IB 1.04066
OGG1 8-oxoguanine DNA glycosylase 1.0365
PRKCQ protein kinase C, theta 1.03529
SNX31 sorting nexin 31 1.03397
SEPT10 septin 10 1.03332
ATXN1 ataxin 1 1.0325
RRP9 ribosomal RNA processing 9, small subunit (SSU) processome component, homolog (yeast) 1.03111
LAMA5 laminin, alpha 5 1.0282
ZFAND6 zinc finger, AN1-type domain 6 1.0276
CTNND1 catenin (cadherin-associated protein), delta 1 1.02709
HDAC9 histone deacetylase 9 1.02266
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa 1.02224
PLGRKT plasminogen receptor, C-terminal lysine transmembrane protein 1.02168
FAM20C family with sequence similarity 20, member C 1.02032
ITM2B integral membrane protein 2B 1.02028
CAMK1D calcium/calmodulin-dependent protein kinase ID 1.01782
FAR2 fatty acyl CoA reductase 2 1.0172
RBFOX1 RNA binding protein, fox-1 homolog (C. elegans) 1 1.017
SLC11A1 solute carrier family 11 (proton-coupled divalent metal ion transporter), member 1 1.01678
TEKT5 tektin 5 1.01557
MRGBP MRG/MORF4L binding protein 1.01273
PHKA2 phosphorylase kinase, alpha 2 (liver) 1.01097
SASH1 SAM and SH3 domain containing 1 1.00985
UNC5C unc-5 homolog C (C. elegans) 1.00867
C11ORF87 chromosome 11 open reading frame 87 1.00611
RIMS3 regulating synaptic membrane exocytosis 3 1.00251

low expression

Symbol Name Standardized Value
DET1 de-etiolated homolog 1 (Arabidopsis) -1.86989
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1 -1.78528
RBMX2 RNA binding motif protein, X-linked 2 -1.66917
MCEMP1 mast cell-expressed membrane protein 1 -1.62398
PGR progesterone receptor -1.54489
GRXCR2 glutaredoxin, cysteine rich 2 -1.54239
PKD1L3 polycystic kidney disease 1-like 3 -1.53062
BEST2 bestrophin 2 -1.49929
CCL1 chemokine (C-C motif) ligand 1 -1.49037
PLD1 phospholipase D1, phosphatidylcholine-specific -1.45769
GPR87 G protein-coupled receptor 87 -1.44426
APLF aprataxin and PNKP like factor -1.44256
SAMD3 sterile alpha motif domain containing 3 -1.35912
SLC17A4 solute carrier family 17, member 4 -1.34977
CAMP cathelicidin antimicrobial peptide -1.34886
LYZL4 lysozyme-like 4 -1.33979
EPB41L1 erythrocyte membrane protein band 4.1-like 1 -1.29338
HCRTR2 hypocretin (orexin) receptor 2 -1.2867
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive) -1.28357
CYTIP cytohesin 1 interacting protein -1.28275
ENGASE endo-beta-N-acetylglucosaminidase -1.26739
PTPRU protein tyrosine phosphatase, receptor type, U -1.24381
CPA1 carboxypeptidase A1 (pancreatic) -1.2404
IL2RG interleukin 2 receptor, gamma -1.23571
TRIQK triple QxxK/R motif containing -1.22389
DMBX1 diencephalon/mesencephalon homeobox 1 -1.21378
TNFRSF11B tumor necrosis factor receptor superfamily, member 11b -1.20828
TMBIM4 transmembrane BAX inhibitor motif containing 4 -1.20554
MMP19 matrix metallopeptidase 19 -1.20433
SEMA3A sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3A -1.20418
MTBP MDM2 binding protein -1.20152
GIPC2 GIPC PDZ domain containing family, member 2 -1.19979
CHRNB1 cholinergic receptor, nicotinic, beta 1 (muscle) -1.1938
FGF4 fibroblast growth factor 4 -1.19237
ALDH1L2 aldehyde dehydrogenase 1 family, member L2 -1.18271
SRGAP3 SLIT-ROBO Rho GTPase activating protein 3 -1.18097
RYK receptor-like tyrosine kinase -1.18011
BBS10 Bardet-Biedl syndrome 10 -1.17996
AKR1C3 aldo-keto reductase family 1, member C3 -1.17989
STKLD1 serine/threonine kinase-like domain containing 1 -1.17849
SLC5A11 solute carrier family 5 (sodium/inositol cotransporter), member 11 -1.17846
GBA glucosidase, beta, acid -1.17263
CABYR calcium binding tyrosine-(Y)-phosphorylation regulated -1.17168
COL6A1 collagen, type VI, alpha 1 -1.16975
EGLN3 egl-9 family hypoxia-inducible factor 3 -1.1635
ARHGAP5 Rho GTPase activating protein 5 -1.15075
ZNF362 zinc finger protein 362 -1.14608
SLC14A2 solute carrier family 14 (urea transporter), member 2 -1.13539
SERPINI1 serpin peptidase inhibitor, clade I (neuroserpin), member 1 -1.13398
PAX9 paired box 9 -1.13077
CCR6 chemokine (C-C motif) receptor 6 -1.12681
PARM1 prostate androgen-regulated mucin-like protein 1 -1.12477
ASB2 ankyrin repeat and SOCS box containing 2 -1.12126
AP4E1 adaptor-related protein complex 4, epsilon 1 subunit -1.11337
SSBP2 single-stranded DNA binding protein 2 -1.11198
GPR85 G protein-coupled receptor 85 -1.10641
MED9 mediator complex subunit 9 -1.08822
MAPK12 mitogen-activated protein kinase 12 -1.08752
COQ4 coenzyme Q4 -1.08666
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9 -1.08656
MTHFD2 methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 2, methenyltetrahydrofolate cyclohydrolase -1.08179
MKRN1 makorin ring finger protein 1 -1.07857
TEX37 testis expressed 37 -1.07818
OTX1 orthodenticle homeobox 1 -1.07618
LIPH lipase, member H -1.07042
RORC RAR-related orphan receptor C -1.06363
PAX7 paired box 7 -1.06338
PCDHB14 protocadherin beta 14 -1.06096
FIGNL1 fidgetin-like 1 -1.05827
PLXNA3 plexin A3 -1.05596
FAM71E1 family with sequence similarity 71, member E1 -1.05223
RHCG Rh family, C glycoprotein -1.04981
SFRP1 secreted frizzled-related protein 1 -1.04953
ABCC6 ATP-binding cassette, sub-family C (CFTR/MRP), member 6 -1.04419
HORMAD2 HORMA domain containing 2 -1.04123
UBL4A ubiquitin-like 4A -1.03987
LAS1L LAS1-like (S. cerevisiae) -1.03903
PABPC4 poly(A) binding protein, cytoplasmic 4 (inducible form) -1.03672
EPX eosinophil peroxidase -1.0365
ACTL7B actin-like 7B -1.033
ALKBH4 alkB, alkylation repair homolog 4 (E. coli) -1.03225
DEF6 differentially expressed in FDCP 6 homolog (mouse) -1.02936
STK40 serine/threonine kinase 40 -1.0289
FGF19 fibroblast growth factor 19 -1.02478
CACNG1 calcium channel, voltage-dependent, gamma subunit 1 -1.02313
AURKC aurora kinase C -1.0207
ABCB7 ATP-binding cassette, sub-family B (MDR/TAP), member 7 -1.01933
ASB5 ankyrin repeat and SOCS box containing 5 -1.01613
MARCH1 membrane-associated ring finger (C3HC4) 1, E3 ubiquitin protein ligase -1.01084
ICAM1 intercellular adhesion molecule 1 -1.00779
SLC22A1 solute carrier family 22 (organic cation transporter), member 1 -1.00679
CYP39A1 cytochrome P450, family 39, subfamily A, polypeptide 1 -1.00314