Ulcerative colitis Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A colitis that is predominantly confined to the mucosa located_in colon and includes characteristic ulcers, or open sores. (Human Disease Ontology, DOID_8577)
External Link https://www.ebi.ac.uk/gwas/search?query=Ulcerative colitis
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Genes

48 genes associated with the Ulcerative colitis phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 2.04459
CCHCR1 coiled-coil alpha-helical rod protein 1 1.69172
IL23R interleukin 23 receptor 1.24351
OTUD3 OTU deubiquitinase 3 1.09309
FCGR2A Fc fragment of IgG, low affinity IIa, receptor (CD32) 1.04952
CARD9 caspase recruitment domain family, member 9 1.00661
NR5A2 nuclear receptor subfamily 5, group A, member 2 0.939467
APEH acylaminoacyl-peptide hydrolase 0.939467
GNA12 guanine nucleotide binding protein (G protein) alpha 12 0.920487
PUS10 pseudouridylate synthase 10 0.802698
NXPE1 neurexophilin and PC-esterase domain family, member 1 0.781677
C1ORF106 chromosome 1 open reading frame 106 0.750033
IL10 interleukin 10 0.713153
LINC00598 long intergenic non-protein coding RNA 598 0.679413
NFKB1 nuclear factor of kappa light polypeptide gene enhancer in B-cells 1 0.679413
DAP death-associated protein 0.669182
TNFSF15 tumor necrosis factor (ligand) superfamily, member 15 0.669182
C21ORF33 chromosome 21 open reading frame 33 0.607009
LSP1 lymphocyte-specific protein 1 0.592545
RNF186 ring finger protein 186 0.572839
ITGAL integrin, alpha L (antigen CD11A (p180), lymphocyte function-associated antigen 1; alpha polypeptide) 0.539238
CCNY cyclin Y 0.534343
C5ORF66 chromosome 5 open reading frame 66 0.522843
PTGIR prostaglandin I2 (prostacyclin) receptor (IP) 0.499091
SLC39A11 solute carrier family 39, member 11 0.499091
LOC100996583 uncharacterized LOC100996583 0.483518
MST1 macrophage stimulating 1 0.472799
PARK7 parkinson protein 7 0.463473
BSN bassoon presynaptic cytomatrix protein 0.449549
MAML2 mastermind-like 2 (Drosophila) 0.434785
PROCR protein C receptor, endothelial 0.405958
CHP1 calcineurin-like EF-hand protein 1 0.405958
GSDMB gasdermin B 0.389385
PLCL1 phospholipase C-like 1 0.389385
ZFP90 ZFP90 zinc finger protein 0.389385
IL17REL interleukin 17 receptor E-like 0.377988
IL7R interleukin 7 receptor 0.377988
MROH3P maestro heat-like repeat family member 3, pseudogene 0.314454
PTPRC protein tyrosine phosphatase, receptor type, C 0.280662
IL26 interleukin 26 0.266721
ADAD1 adenosine deaminase domain containing 1 (testis-specific) 0.22914
HDAC9 histone deacetylase 9 0.165905
CIITA class II, major histocompatibility complex, transactivator 0.129504
BTNL2 butyrophilin-like 2 0.129504
LINC00243 long intergenic non-protein coding RNA 243 0.104568
SATB2 SATB homeobox 2 0.085234
LAMB1 laminin, beta 1 0.057619
CACNA2D1 calcium channel, voltage-dependent, alpha 2/delta subunit 1 0.048624