Type 1 diabetes Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description disease cluster belonging to disease group immune (Genetic Association Database)
External Link https://www.ebi.ac.uk/gwas/search?query=Type 1 diabetes
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Genes

50 genes associated with the Type 1 diabetes phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1 2.05077
HLA-DRA major histocompatibility complex, class II, DR alpha 1.89338
PHTF1 putative homeodomain transcription factor 1 1.43234
SH2B3 SH2B adaptor protein 3 1.22654
ERBB3 erb-b2 receptor tyrosine kinase 3 1.18016
CLEC16A C-type lectin domain family 16, member A 0.969518
NAA25 N(alpha)-acetyltransferase 25, NatB auxiliary subunit 0.958097
CUX2 cut-like homeobox 2 0.910257
CTLA4 cytotoxic T-lymphocyte-associated protein 4 0.863028
CTSH cathepsin H 0.841354
PTPN2 protein tyrosine phosphatase, non-receptor type 2 0.835701
CENPW centromere protein W 0.734471
KIAA1109 KIAA1109 0.729497
GSDMB gasdermin B 0.725138
ZFP36L1 ZFP36 ring finger protein-like 1 0.696558
BACH2 BTB and CNC homology 1, basic leucine zipper transcription factor 2 0.673878
GLIS3 GLIS family zinc finger 3 0.673878
SIRPG signal-regulatory protein gamma 0.656287
CD69 CD69 molecule 0.637972
IFIH1 interferon induced with helicase C domain 1 0.637972
PRKD2 protein kinase D2 0.626595
LMO7 LIM domain 7 0.607009
MEG3 maternally expressed 3 (non-protein coding) 0.592545
IKZF4 IKAROS family zinc finger 4 (Eos) 0.526478
UBASH3A ubiquitin associated and SH3 domain containing A 0.499091
LOC399716 uncharacterized LOC399716 0.472799
EFR3B EFR3 homolog B (S. cerevisiae) 0.472799
TYK2 tyrosine kinase 2 0.472799
SKAP2 src kinase associated phosphoprotein 2 0.463473
IL2RA interleukin 2 receptor, alpha 0.463473
GAB3 GRB2-associated binding protein 3 0.444144
CD226 CD226 molecule 0.434785
CLEC2D C-type lectin domain family 2, member D 0.369252
PRKCQ protein kinase C, theta 0.342586
COLEC10 collectin sub-family member 10 (C-type lectin) 0.280662
PGM1 phosphoglucomutase 1 0.280662
JAZF1-AS1 JAZF1 antisense RNA 1 0.266721
DNAH2 dynein, axonemal, heavy chain 2 0.266721
CLECL1 C-type lectin-like 1 0.246511
HPSE2 heparanase 2 (inactive) 0.238523
LOC100506457 uncharacterized LOC100506457 0.165905
LPAR3 lysophosphatidic acid receptor 3 0.165905
ADAD1 adenosine deaminase domain containing 1 (testis-specific) 0.129504
TNP2 transition protein 2 (during histone to protamine replacement) 0.129504
RASGRP1 RAS guanyl releasing protein 1 (calcium and DAG-regulated) 0.104568
FSTL4 follistatin-like 4 0.085234
LINC01104 long intergenic non-protein coding RNA 1104 0.085234
IL25 interleukin 25 0.070053
CAPSL calcyphosine-like 0.048624
IL7R interleukin 7 receptor 0.048624