TGFB2_KD_GDS4483_351_mouse_Embryonic palatal tissue Gene Set

Dataset GEO Signatures of Differentially Expressed Genes for Gene Perturbations
Category transcriptomics
Type gene perturbation
Description gene perturbation identified as [gene symbol]_[perturbation]_[GEO accession]_[perturbation ID]_[organism]_[cell or tissue] (Gene Expression Omnibus)
External Link http://www.ncbi.nlm.nih.gov/geo/query/acc.cgi?acc=GDS4483
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Genes

452 genes differentially expressed following the TGFB2_KD_GDS4483_351_mouse_Embryonic palatal tissue gene perturbation from the GEO Signatures of Differentially Expressed Genes for Gene Perturbations dataset.

increased expression

Symbol Name
ABCA6 ATP-binding cassette, sub-family A (ABC1), member 6
ADAMTS12 ADAM metallopeptidase with thrombospondin type 1 motif, 12
ADGB androglobin
ADGRF1 adhesion G protein-coupled receptor F1
AGMO alkylglycerol monooxygenase
AGR3 anterior gradient 3
AGT angiotensinogen (serpin peptidase inhibitor, clade A, member 8)
AK7 adenylate kinase 7
AKAP14 A kinase (PRKA) anchor protein 14
ANKH ANKH inorganic pyrophosphate transport regulator
ANXA2 annexin A2
APOH apolipoprotein H (beta-2-glycoprotein I)
ARMC3 armadillo repeat containing 3
ARMC4 armadillo repeat containing 4
ASCL1 achaete-scute family bHLH transcription factor 1
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATP6V1H ATPase, H+ transporting, lysosomal 50/57kDa, V1 subunit H
B4GALT7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
BIRC7 baculoviral IAP repeat containing 7
C1QTNF1 C1q and tumor necrosis factor related protein 1
C1S complement component 1, s subcomponent
CACUL1 CDK2-associated, cullin domain 1
CAPSL calcyphosine-like
CARHSP1 calcium regulated heat stable protein 1, 24kDa
CBLN3 cerebellin 3 precursor
CCDC108 coiled-coil domain containing 108
CCDC113 coiled-coil domain containing 113
CCDC153 coiled-coil domain containing 153
CCDC176 coiled-coil domain containing 176
CCDC39 coiled-coil domain containing 39
CCDC67 coiled-coil domain containing 67
CCDC93 coiled-coil domain containing 93
CCDC96 coiled-coil domain containing 96
CCL2 chemokine (C-C motif) ligand 2
CCNO cyclin O
CDC42BPB CDC42 binding protein kinase beta (DMPK-like)
CFAP52 cilia and flagella associated protein 52
CFH complement factor H
CHD8 chromodomain helicase DNA binding protein 8
CHSY3 chondroitin sulfate synthase 3
CLK2 CDC-like kinase 2
CLTC clathrin, heavy chain (Hc)
CNN3 calponin 3, acidic
CREBL2 cAMP responsive element binding protein-like 2
CRH corticotropin releasing hormone
CSTB cystatin B (stefin B)
CYBB cytochrome b-245, beta polypeptide
DDIT4 DNA-damage-inducible transcript 4
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DDX4 DEAD (Asp-Glu-Ala-Asp) box polypeptide 4
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
DHX58 DEXH (Asp-Glu-X-His) box polypeptide 58
DKK2 dickkopf WNT signaling pathway inhibitor 2
DKK3 dickkopf WNT signaling pathway inhibitor 3
DMKN dermokine
DMP1 dentin matrix acidic phosphoprotein 1
DNAH12 dynein, axonemal, heavy chain 12
DNAH6 dynein, axonemal, heavy chain 6
DNAI2 dynein, axonemal, intermediate chain 2
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNAJB13 DnaJ (Hsp40) homolog, subfamily B, member 13
DNALI1 dynein, axonemal, light intermediate chain 1
DRC1 dynein regulatory complex subunit 1
DYNLRB2 dynein, light chain, roadblock-type 2
ECSCR endothelial cell surface expressed chemotaxis and apoptosis regulator
EEF2KMT eukaryotic elongation factor 2 lysine methyltransferase
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
EFHC1 EF-hand domain (C-terminal) containing 1
EIF4B eukaryotic translation initiation factor 4B
EIF4E2 eukaryotic translation initiation factor 4E family member 2
ELAVL4 ELAV like neuron-specific RNA binding protein 4
ELMOD1 ELMO/CED-12 domain containing 1
ELOVL5 ELOVL fatty acid elongase 5
EML5 echinoderm microtubule associated protein like 5
ENKUR enkurin, TRPC channel interacting protein
ENO4 enolase family member 4
EPYC epiphycan
ERP44 endoplasmic reticulum protein 44
ESD esterase D
EXOSC2 exosome component 2
EXT1 exostosin glycosyltransferase 1
EYA2 EYA transcriptional coactivator and phosphatase 2
FAM124B family with sequence similarity 124B
FAM162B family with sequence similarity 162, member B
FAM171B family with sequence similarity 171, member B
FAM208A family with sequence similarity 208, member A
FAM222A family with sequence similarity 222, member A
FAM47E family with sequence similarity 47, member E
FMNL3 formin-like 3
FOXJ1 forkhead box J1
FRYL FRY-like
FXYD5 FXYD domain containing ion transport regulator 5
GBP4 guanylate binding protein 4
GDE1 glycerophosphodiester phosphodiesterase 1
GINM1 glycoprotein integral membrane 1
GLCCI1 glucocorticoid induced 1
GLI2 GLI family zinc finger 2
GMFB glia maturation factor, beta
GPR151 G protein-coupled receptor 151
H19 H19, imprinted maternally expressed transcript (non-protein coding)
HCLS1 hematopoietic cell-specific Lyn substrate 1
HDC histidine decarboxylase
HMOX1 heme oxygenase 1
HSPA2 heat shock 70kDa protein 2
HSPA4L heat shock 70kDa protein 4-like
IGSF9 immunoglobulin superfamily, member 9
IL9 interleukin 9
ILKAP integrin-linked kinase-associated serine/threonine phosphatase
INA internexin neuronal intermediate filament protein, alpha
IQCG IQ motif containing G
IQUB IQ motif and ubiquitin domain containing
KBTBD6 kelch repeat and BTB (POZ) domain containing 6
KCNIP4 Kv channel interacting protein 4
KCNK4 potassium channel, two pore domain subfamily K, member 4
KDM5D lysine (K)-specific demethylase 5D
KLHL20 kelch-like family member 20
KRT13 keratin 13, type I
KRT20 keratin 20, type I
KRT4 keratin 4, type II
KRT6B keratin 6B, type II
L1CAM L1 cell adhesion molecule
LONRF2 LON peptidase N-terminal domain and ring finger 2
LRGUK leucine-rich repeats and guanylate kinase domain containing
LRRC23 leucine rich repeat containing 23
LRRC34 leucine rich repeat containing 34
LRRC36 leucine rich repeat containing 36
LRRC46 leucine rich repeat containing 46
MAMDC2 MAM domain containing 2
MAN1A2 mannosidase, alpha, class 1A, member 2
MAP3K8 mitogen-activated protein kinase kinase kinase 8
MAPK9 mitogen-activated protein kinase 9
MAPT microtubule-associated protein tau
MED26 mediator complex subunit 26
MEGF9 multiple EGF-like-domains 9
MEIG1 meiosis/spermiogenesis associated 1
METAP1D methionyl aminopeptidase type 1D (mitochondrial)
MFSD6 major facilitator superfamily domain containing 6
MICAL3 microtubule associated monooxygenase, calponin and LIM domain containing 3
MIF macrophage migration inhibitory factor (glycosylation-inhibiting factor)
MMP13 matrix metallopeptidase 13
MORN1 MORN repeat containing 1
MORN3 MORN repeat containing 3
MORN5 MORN repeat containing 5
MYB v-myb avian myeloblastosis viral oncogene homolog
NAPB N-ethylmaleimide-sensitive factor attachment protein, beta
NCKIPSD NCK interacting protein with SH3 domain
NCOA1 nuclear receptor coactivator 1
NDUFA4L2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 4-like 2
NEK8 NIMA-related kinase 8
NFKBIA nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, alpha
NKX2-1 NK2 homeobox 1
NME5 NME/NM23 family member 5
NPC2 Niemann-Pick disease, type C2
NRSN1 neurensin 1
NUDT4 nudix (nucleoside diphosphate linked moiety X)-type motif 4
OR51E2 olfactory receptor, family 51, subfamily E, member 2
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PGLYRP1 peptidoglycan recognition protein 1
PHEX phosphate regulating endopeptidase homolog, X-linked
PHOX2A paired-like homeobox 2a
PHOX2B paired-like homeobox 2b
PIH1D2 PIH1 domain containing 2
PIWIL2 piwi-like RNA-mediated gene silencing 2
PLA2G2C phospholipase A2, group IIC
PLET1 placenta expressed transcript 1
POLR1B polymerase (RNA) I polypeptide B, 128kDa
PON2 paraoxonase 2
PPIL6 peptidylprolyl isomerase (cyclophilin)-like 6
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPT1 palmitoyl-protein thioesterase 1
PRPH peripherin
PSME4 proteasome (prosome, macropain) activator subunit 4
RBM5 RNA binding motif protein 5
RBP4 retinol binding protein 4, plasma
RIIAD1 regulatory subunit of type II PKA R-subunit (RIIa) domain containing 1
RNF145 ring finger protein 145
RNF39 ring finger protein 39
RNF4 ring finger protein 4
RPL38 ribosomal protein L38
RSPH1 radial spoke head 1 homolog (Chlamydomonas)
RSPH4A radial spoke head 4 homolog A (Chlamydomonas)
RTN1 reticulon 1
S100A6 S100 calcium binding protein A6
SAMD14 sterile alpha motif domain containing 14
SCG2 secretogranin II
SCG3 secretogranin III
SECISBP2 SECIS binding protein 2
SERPINE1 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1
SERPING1 serpin peptidase inhibitor, clade G (C1 inhibitor), member 1
SGCE sarcoglycan, epsilon
SLC16A14 solute carrier family 16, member 14
SLC26A4 solute carrier family 26 (anion exchanger), member 4
SLC45A3 solute carrier family 45, member 3
SLITRK1 SLIT and NTRK-like family, member 1
SNED1 sushi, nidogen and EGF-like domains 1
SNX10 sorting nexin 10
SOX13 SRY (sex determining region Y)-box 13
SPA17 sperm autoantigenic protein 17
SPAG6 sperm associated antigen 6
SPAG8 sperm associated antigen 8
SPP1 secreted phosphoprotein 1
SRSF1 serine/arginine-rich splicing factor 1
SSU72 SSU72 RNA polymerase II CTD phosphatase homolog (S. cerevisiae)
STMN2 stathmin 2
STMN3 stathmin-like 3
STMN4 stathmin-like 4
SYPL2 synaptophysin-like 2
SYT4 synaptotagmin IV
TEAD3 TEA domain family member 3
TEKT1 tektin 1
TEKT4 tektin 4
TGFB2 transforming growth factor, beta 2
TGFBR3 transforming growth factor, beta receptor III
TMCO2 transmembrane and coiled-coil domains 2
TMEM179 transmembrane protein 179
TMEM212 transmembrane protein 212
TMEM26 transmembrane protein 26
TMOD2 tropomodulin 2 (neuronal)
TPRKB TP53RK binding protein
TRAF1 TNF receptor-associated factor 1
TRAK2 trafficking protein, kinesin binding 2
TSNAX translin-associated factor X
TSNAXIP1 translin-associated factor X interacting protein 1
TSPYL1 TSPY-like 1
TTC21A tetratricopeptide repeat domain 21A
TTC25 tetratricopeptide repeat domain 25
TTC29 tetratricopeptide repeat domain 29
TTPAL tocopherol (alpha) transfer protein-like
UBE2N ubiquitin-conjugating enzyme E2N
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2
UPK3A uroplakin 3A
VANGL2 VANGL planar cell polarity protein 2
VIP vasoactive intestinal peptide
VIT vitrin
VMP1 vacuole membrane protein 1
WDR63 WD repeat domain 63
WSCD1 WSC domain containing 1
ZAK sterile alpha motif and leucine zipper containing kinase AZK
ZBTB40 zinc finger and BTB domain containing 40
ZCCHC9 zinc finger, CCHC domain containing 9
ZMYND10 zinc finger, MYND-type containing 10
ZMYND12 zinc finger, MYND-type containing 12
ZNF384 zinc finger protein 384
ZNF474 zinc finger protein 474
ZNF655 zinc finger protein 655
ZNF804A zinc finger protein 804A
ZNF878 zinc finger protein 878

decreased expression

Symbol Name
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ABLIM3 actin binding LIM protein family, member 3
ACTA1 actin, alpha 1, skeletal muscle
ADAMTS20 ADAM metallopeptidase with thrombospondin type 1 motif, 20
ADCY3 adenylate cyclase 3
ADCY8 adenylate cyclase 8 (brain)
ADGRL2 adhesion G protein-coupled receptor L2
AK1 adenylate kinase 1
AKT1 v-akt murine thymoma viral oncogene homolog 1
AP4B1 adaptor-related protein complex 4, beta 1 subunit
ARHGAP36 Rho GTPase activating protein 36
ARL6IP6 ADP-ribosylation factor-like 6 interacting protein 6
ATP1B4 ATPase, Na+/K+ transporting, beta 4 polypeptide
B3GNT8 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 8
B4GALNT2 beta-1,4-N-acetyl-galactosaminyl transferase 2
BBS5 Bardet-Biedl syndrome 5
BRI3 brain protein I3
C1QTNF7 C1q and tumor necrosis factor related protein 7
C2CD4C C2 calcium-dependent domain containing 4C
CA2 carbonic anhydrase II
CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3
CALR calreticulin
CAV3 caveolin 3
CBX4 chromobox homolog 4
CCDC137 coiled-coil domain containing 137
CCNI cyclin I
CDC6 cell division cycle 6
CDC73 cell division cycle 73
CDCA5 cell division cycle associated 5
CDH4 cadherin 4, type 1, R-cadherin (retinal)
CENPM centromere protein M
CEP57L1 centrosomal protein 57kDa-like 1
CLDN1 claudin 1
CLDN22 claudin 22
CLDN5 claudin 5
CLIC4 chloride intracellular channel 4
CLN6 ceroid-lipofuscinosis, neuronal 6, late infantile, variant
COMMD3-BMI1 COMMD3-BMI1 readthrough
CPA3 carboxypeptidase A3 (mast cell)
CRYGD crystallin, gamma D
CSRP1 cysteine and glycine-rich protein 1
CYP26B1 cytochrome P450, family 26, subfamily B, polypeptide 1
DEPDC1B DEP domain containing 1B
DERL3 derlin 3
DIAPH3 diaphanous-related formin 3
DLX2 distal-less homeobox 2
DUSP16 dual specificity phosphatase 16
DUSP9 dual specificity phosphatase 9
ECD ecdysoneless homolog (Drosophila)
EDEM1 ER degradation enhancer, mannosidase alpha-like 1
EMC1 ER membrane protein complex subunit 1
EME1 essential meiotic structure-specific endonuclease 1
ENAM enamelin
ERMARD ER membrane-associated RNA degradation
FABP4 fatty acid binding protein 4, adipocyte
FAF2 Fas associated factor family member 2
FAM127A family with sequence similarity 127, member A
FAM199X family with sequence similarity 199, X-linked
FAM72A family with sequence similarity 72, member A
FBLN5 fibulin 5
FBN1 fibrillin 1
FBXL2 F-box and leucine-rich repeat protein 2
FBXO44 F-box protein 44
FBXO5 F-box protein 5
GCSAM germinal center-associated, signaling and motility
GDF10 growth differentiation factor 10
GDPD2 glycerophosphodiester phosphodiesterase domain containing 2
GEN1 GEN1 Holliday junction 5' flap endonuclease
GIMAP4 GTPase, IMAP family member 4
GLIPR1L2 GLI pathogenesis-related 1 like 2
GREM2 gremlin 2, DAN family BMP antagonist
GSG2 germ cell associated 2 (haspin)
GSR glutathione reductase
H2AFV H2A histone family, member V
HBE1 hemoglobin, epsilon 1
HBZ hemoglobin, zeta
HS3ST1 heparan sulfate (glucosamine) 3-O-sulfotransferase 1
HSPB3 heat shock 27kDa protein 3
HTR5A 5-hydroxytryptamine (serotonin) receptor 5A, G protein-coupled
IDH1 isocitrate dehydrogenase 1 (NADP+), soluble
IGFALS insulin-like growth factor binding protein, acid labile subunit
IGFBPL1 insulin-like growth factor binding protein-like 1
IL17B interleukin 17B
IL33 interleukin 33
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
ITM2C integral membrane protein 2C
JMY junction mediating and regulatory protein, p53 cofactor
KCNF1 potassium channel, voltage gated modifier subfamily F, member 1
KL klotho
KRIT1 KRIT1, ankyrin repeat containing
KRT26 keratin 26, type I
LMOD3 leiomodin 3 (fetal)
LOC100129924 uncharacterized LOC100129924
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRP5 low density lipoprotein receptor-related protein 5
LRRC4 leucine rich repeat containing 4
LRRK1 leucine-rich repeat kinase 1
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3
LYVE1 lymphatic vessel endothelial hyaluronan receptor 1
LYZ lysozyme
LZTFL1 leucine zipper transcription factor-like 1
MAPK12 mitogen-activated protein kinase 12
MAU2 MAU2 sister chromatid cohesion factor
MED10 mediator complex subunit 10
MEI1 meiosis inhibitor 1
METTL24 methyltransferase like 24
MFN2 mitofusin 2
MLH1 mutL homolog 1
MND1 meiotic nuclear divisions 1 homolog (S. cerevisiae)
MTFR2 mitochondrial fission regulator 2
MTUS2 microtubule associated tumor suppressor candidate 2
MUSTN1 musculoskeletal, embryonic nuclear protein 1
MYBPH myosin binding protein H
MYF5 myogenic factor 5
MYF6 myogenic factor 6 (herculin)
MYH3 myosin, heavy chain 3, skeletal muscle, embryonic
MYH7 myosin, heavy chain 7, cardiac muscle, beta
MYH8 myosin, heavy chain 8, skeletal muscle, perinatal
MYLPF myosin light chain, phosphorylatable, fast skeletal muscle
MYOT myotilin
N4BP2L2 NEDD4 binding protein 2-like 2
NAP1L2 nucleosome assembly protein 1-like 2
NARS asparaginyl-tRNA synthetase
NBR1 neighbor of BRCA1 gene 1
NCAPG non-SMC condensin I complex, subunit G
NDC80 NDC80 kinetochore complex component
NEB nebulin
NFE2 nuclear factor, erythroid 2
NOP10 NOP10 ribonucleoprotein
NR5A2 nuclear receptor subfamily 5, group A, member 2
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
ORMDL2 ORMDL sphingolipid biosynthesis regulator 2
OSGEP O-sialoglycoprotein endopeptidase
PANK2 pantothenate kinase 2
PBDC1 polysaccharide biosynthesis domain containing 1
PDZRN3 PDZ domain containing ring finger 3
PLA2G1B phospholipase A2, group IB (pancreas)
POU2F1 POU class 2 homeobox 1
PPP1R16A protein phosphatase 1, regulatory subunit 16A
PRELID2 PRELI domain containing 2
PREPL prolyl endopeptidase-like
PRRG2 proline rich Gla (G-carboxyglutamic acid) 2
PTGDS prostaglandin D2 synthase 21kDa (brain)
PTPN1 protein tyrosine phosphatase, non-receptor type 1
PTPN9 protein tyrosine phosphatase, non-receptor type 9
PTRF polymerase I and transcript release factor
RAB11A RAB11A, member RAS oncogene family
RAB11FIP5 RAB11 family interacting protein 5 (class I)
RAB8B RAB8B, member RAS oncogene family
RASL11B RAS-like, family 11, member B
RNF2 ring finger protein 2
RPL26 ribosomal protein L26
RPS19 ribosomal protein S19
RRAD Ras-related associated with diabetes
RUNX3 runt-related transcription factor 3
SAT1 spermidine/spermine N1-acetyltransferase 1
SEC24A SEC24 family member A
SERTAD4 SERTA domain containing 4
SHMT2 serine hydroxymethyltransferase 2 (mitochondrial)
SIK2 salt-inducible kinase 2
SLC1A2 solute carrier family 1 (glial high affinity glutamate transporter), member 2
SLC35E1 solute carrier family 35, member E1
SLC38A9 solute carrier family 38, member 9
SNX13 sorting nexin 13
SNX4 sorting nexin 4
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
SPSB4 splA/ryanodine receptor domain and SOCS box containing 4
STAG3 stromal antigen 3
SUV420H1 suppressor of variegation 4-20 homolog 1 (Drosophila)
SWSAP1 SWIM-type zinc finger 7 associated protein 1
SYNPO2L synaptopodin 2-like
TBC1D20 TBC1 domain family, member 20
TBC1D9B TBC1 domain family, member 9B (with GRAM domain)
TCEAL7 transcription elongation factor A (SII)-like 7
TEK TEK tyrosine kinase, endothelial
TFAP2B transcription factor AP-2 beta (activating enhancer binding protein 2 beta)
THBS4 thrombospondin 4
TIGD3 tigger transposable element derived 3
TMEM132C transmembrane protein 132C
TMEM178A transmembrane protein 178A
TMEM182 transmembrane protein 182
TMEM74B transmembrane protein 74B
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNMD tenomodulin
TNNC2 troponin C type 2 (fast)
TNNT1 troponin T type 1 (skeletal, slow)
TNNT3 troponin T type 3 (skeletal, fast)
TRIL TLR4 interactor with leucine-rich repeats
TSPAN31 tetraspanin 31
TTN titin
UHRF1BP1L UHRF1 binding protein 1-like
UNC45B unc-45 homolog B (C. elegans)
USP22 ubiquitin specific peptidase 22
UTRN utrophin
UVSSA UV-stimulated scaffold protein A
VPS51 vacuolar protein sorting 51 homolog (S. cerevisiae)
VWA2 von Willebrand factor A domain containing 2
WNT10B wingless-type MMTV integration site family, member 10B
XPOT exportin, tRNA
ZBED5 zinc finger, BED-type containing 5
ZFP37 ZFP37 zinc finger protein
ZNF799 zinc finger protein 799
ZPBP zona pellucida binding protein
ZXDC ZXD family zinc finger C