Systemic sclerosis Gene Set

Dataset GWAS Catalog SNP-Phenotype Associations
Category disease or phenotype associations
Type phenotype
Description A scleroderma that is characterized by fibrosis (or hardening) of the skin and major organs, as well as vascular alterations, and autoantibodies. (Human Disease Ontology, DOID_418)
External Link https://www.ebi.ac.uk/gwas/search?query=Systemic sclerosis
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Genes

9 genes associated with the Systemic sclerosis phenotype in GWAS datasets from the GWAS Catalog SNP-Phenotype Associations dataset.

Symbol Name Standardized Value
HLA-DRA major histocompatibility complex, class II, DR alpha 1.23076
NOTCH4 notch 4 1.06165
TNPO3 transportin 3 0.750033
STAT4 signal transducer and activator of transcription 4 0.750033
CD247 CD247 molecule 0.483518
TNIP1 TNFAIP3 interacting protein 1 0.463473
C6ORF10 chromosome 6 open reading frame 10 0.434785
SOX5 SRY (sex determining region Y)-box 5 0.342586
GRB10 growth factor receptor-bound protein 10 0.220915