Skin Cutaneous Melanoma_SKCM_TCGA-RP-A694-06A-11R-A311-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

178 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-RP-A694-06A-11R-A311-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACACA acetyl-CoA carboxylase alpha
ACTL7A actin-like 7A
ADCY9 adenylate cyclase 9
ADGRD2 adhesion G protein-coupled receptor D2
ADSSL1 adenylosuccinate synthase like 1
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B
AP2B1 adaptor-related protein complex 2, beta 1 subunit
AQP4 aquaporin 4
ARHGEF33 Rho guanine nucleotide exchange factor (GEF) 33
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARMT1 acidic residue methyltransferase 1
ATP2B3 ATPase, Ca++ transporting, plasma membrane 3
BBS5 Bardet-Biedl syndrome 5
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like
BRCA1 breast cancer 1, early onset
C12ORF76 chromosome 12 open reading frame 76
C14ORF39 chromosome 14 open reading frame 39
C1ORF64 chromosome 1 open reading frame 64
CABP5 calcium binding protein 5
CBWD6 COBW domain containing 6
CBX8 chromobox homolog 8
CCDC177 coiled-coil domain containing 177
CCDC43 coiled-coil domain containing 43
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CHORDC1 cysteine and histidine-rich domain (CHORD) containing 1
CLN8 ceroid-lipofuscinosis, neuronal 8 (epilepsy, progressive with mental retardation)
CNTF ciliary neurotrophic factor
COA3 cytochrome c oxidase assembly factor 3
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae)
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2
CYP19A1 cytochrome P450, family 19, subfamily A, polypeptide 1
DAPK1 death-associated protein kinase 1
DCAF4 DDB1 and CUL4 associated factor 4
DDI1 DNA-damage inducible 1 homolog 1 (S. cerevisiae)
DDX25 DEAD (Asp-Glu-Ala-Asp) box helicase 25
DUSP3 dual specificity phosphatase 3
ENOSF1 enolase superfamily member 1
EXOSC3 exosome component 3
FAM126A family with sequence similarity 126, member A
FAM161A family with sequence similarity 161, member A
FAM170B family with sequence similarity 170, member B
FAM90A7P putative protein FAM90A7
FBXL20 F-box and leucine-rich repeat protein 20
FBXL4 F-box and leucine-rich repeat protein 4
FBXO30 F-box protein 30
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FHL5 four and a half LIM domains 5
FOXRED2 FAD-dependent oxidoreductase domain containing 2
FTH1 ferritin, heavy polypeptide 1
GCK glucokinase (hexokinase 4)
GFAP glial fibrillary acidic protein
GK glycerol kinase
GK3P glycerol kinase 3 pseudogene
GLDN gliomedin
GLO1 glyoxalase I
GMNN geminin, DNA replication inhibitor
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C
HBA2 hemoglobin, alpha 2
HBB hemoglobin, beta
HCG4 HLA complex group 4 (non-protein coding)
HIGD1B HIG1 hypoxia inducible domain family, member 1B
HSD17B7 hydroxysteroid (17-beta) dehydrogenase 7
HSPA1A heat shock 70kDa protein 1A
HSPA1B heat shock 70kDa protein 1B
HSPA4L heat shock 70kDa protein 4-like
IDI1 isopentenyl-diphosphate delta isomerase 1
IFNL3 interferon, lambda 3
ISL1 ISL LIM homeobox 1
ITIH2 inter-alpha-trypsin inhibitor heavy chain 2
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3
IZUMO1 izumo sperm-egg fusion 1
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KIAA0408 KIAA0408
KIAA1456 KIAA1456
KLHL35 kelch-like family member 35
LIN52 lin-52 DREAM MuvB core complex component
LINC00052 long intergenic non-protein coding RNA 52
LINC00320 long intergenic non-protein coding RNA 320
LINC01599 long intergenic non-protein coding RNA 1599
LOC146481
LOC285740 uncharacterized LOC285740
LOC340357 uncharacterized LOC340357
LOC727896 cysteine and histidine-rich domain (CHORD) containing 1 pseudogene
LPIN1 lipin 1
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
MID1 midline 1
MLX MLX, MAX dimerization protein
MOBP myelin-associated oligodendrocyte basic protein
MOV10L1 Mov10 RISC complex RNA helicase like 1
MRPS14 mitochondrial ribosomal protein S14
MYL4 myosin, light chain 4, alkali; atrial, embryonic
MYOCD myocardin
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NDUFAF7 NADH dehydrogenase (ubiquinone) complex I, assembly factor 7
NEFH neurofilament, heavy polypeptide
NEURL1 neuralized E3 ubiquitin protein ligase 1
NIPSNAP3A nipsnap homolog 3A (C. elegans)
NKX6-2 NK6 homeobox 2
NNAT neuronatin
NPHP4 nephronophthisis 4
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
NPPB natriuretic peptide B
NQO1 NAD(P)H dehydrogenase, quinone 1
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR10X1 olfactory receptor, family 10, subfamily X, member 1 (gene/pseudogene)
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR4F29 olfactory receptor, family 4, subfamily F, member 29
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PLGLA plasminogen-like A (pseudogene)
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
PNPLA3 patatin-like phospholipase domain containing 3
POMC proopiomelanocortin
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PRDM13 PR domain containing 13
PSAT1 phosphoserine aminotransferase 1
PSMC3IP PSMC3 interacting protein
RFPL1S RFPL1 antisense RNA 1
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae)
RNF122 ring finger protein 122
RNF144B ring finger protein 144B
RNF212 ring finger protein 212
RUNDC1 RUN domain containing 1
SDCBP syndecan binding protein (syntenin)
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SLC16A12 solute carrier family 16, member 12
SLC16A8 solute carrier family 16 (monocarboxylate transporter), member 8
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC25A43 solute carrier family 25, member 43
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2
SLC6A13 solute carrier family 6 (neurotransmitter transporter), member 13
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20
SLCO4C1 solute carrier organic anion transporter family, member 4C1
SNORA59B small nucleolar RNA, H/ACA box 59B
SNORA80E small nucleolar RNA, H/ACA box 80E
SPG7 spastic paraplegia 7 (pure and complicated autosomal recessive)
SQLE squalene epoxidase
ST20-AS1 ST20 antisense RNA 1
STAG3 stromal antigen 3
STAT5A signal transducer and activator of transcription 5A
STRADB STE20-related kinase adaptor beta
STX7 syntaxin 7
SULT1C2 sulfotransferase family, cytosolic, 1C, member 2
SULT4A1 sulfotransferase family 4A, member 1
SYNGR3 synaptogyrin 3
SYNRG synergin, gamma
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TAS2R43 taste receptor, type 2, member 43
TBC1D3H TBC1 domain family, member 3H
TBP TATA box binding protein
TDRD10 tudor domain containing 10
TDRD9 tudor domain containing 9
TEFM transcription elongation factor, mitochondrial
TMEM185B transmembrane protein 185B
TMEM234 transmembrane protein 234
TMUB2 transmembrane and ubiquitin-like domain containing 2
TRAK2 trafficking protein, kinesin binding 2
TRH thyrotropin-releasing hormone
TRIM54 tripartite motif containing 54
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TTI2 TELO2 interacting protein 2
TULP4 tubby like protein 4
VMP1 vacuole membrane protein 1
VSIG4 V-set and immunoglobulin domain containing 4
XAGE3 X antigen family, member 3
ZFR2 zinc finger RNA binding protein 2
ZFYVE16 zinc finger, FYVE domain containing 16
ZNHIT3 zinc finger, HIT-type containing 3
ZYG11A zyg-11 family member A, cell cycle regulator

low expression

Symbol Name
ARMCX6 armadillo repeat containing, X-linked 6
CDK11B cyclin-dependent kinase 11B