Skin Cutaneous Melanoma_SKCM_TCGA-RP-A693-06A-13R-A311-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

277 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-RP-A693-06A-13R-A311-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACOT9 acyl-CoA thioesterase 9
ACSM2A acyl-CoA synthetase medium-chain family member 2A
ACTL7A actin-like 7A
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADAMTSL2 ADAMTS-like 2
ADI1 acireductone dioxygenase 1
AGPAT6 1-acylglycerol-3-phosphate O-acyltransferase 6
AHSP alpha hemoglobin stabilizing protein
ALDH3A2 aldehyde dehydrogenase 3 family, member A2
ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12
ANK2 ankyrin 2, neuronal
ANKRD44 ankyrin repeat domain 44
ANP32A-IT1 ANP32A intronic transcript 1
AP3M2 adaptor-related protein complex 3, mu 2 subunit
APBB3 amyloid beta (A4) precursor protein-binding, family B, member 3
ARL4D ADP-ribosylation factor-like 4D
ARMC9 armadillo repeat containing 9
ARX aristaless related homeobox
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ASMTL-AS1 ASMTL antisense RNA 1
ASPA aspartoacylase
ASPDH aspartate dehydrogenase domain containing
ATG16L2 autophagy related 16-like 2 (S. cerevisiae)
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATRNL1 attractin-like 1
BARHL1 BarH-like homeobox 1
BCL2L2 BCL2-like 2
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BRS3 bombesin-like receptor 3
BSDC1 BSD domain containing 1
C11ORF42 chromosome 11 open reading frame 42
C12ORF71 chromosome 12 open reading frame 71
C19ORF71 chromosome 19 open reading frame 71
C1GALT1 core 1 synthase, glycoprotein-N-acetylgalactosamine 3-beta-galactosyltransferase 1
C3ORF36 chromosome 3 open reading frame 36
C5AR2 complement component 5a receptor 2
C6ORF25 chromosome 6 open reading frame 25
CA13 carbonic anhydrase XIII
CACNG5 calcium channel, voltage-dependent, gamma subunit 5
CBR1 carbonyl reductase 1
CCL15 chemokine (C-C motif) ligand 15
CCL3 chemokine (C-C motif) ligand 3
CDCP2 CUB domain containing protein 2
CDK15 cyclin-dependent kinase 15
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CLIC2 chloride intracellular channel 2
CNN3 calponin 3, acidic
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1
CNST consortin, connexin sorting protein
COBLL1 cordon-bleu WH2 repeat protein-like 1
COL15A1 collagen, type XV, alpha 1
CORO2A coronin, actin binding protein, 2A
COX4I2 cytochrome c oxidase subunit IV isoform 2 (lung)
CRIPAK cysteine-rich PAK1 inhibitor
CSGALNACT1 chondroitin sulfate N-acetylgalactosaminyltransferase 1
CTSG cathepsin G
CYGB cytoglobin
DAAM2 dishevelled associated activator of morphogenesis 2
DCTN6 dynactin 6
DDX26B DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
DENND6A DENN/MADD domain containing 6A
DEPTOR DEP domain containing MTOR-interacting protein
DLC1 DLC1 Rho GTPase activating protein
DNAJB1 DnaJ (Hsp40) homolog, subfamily B, member 1
DNAJC27 DnaJ (Hsp40) homolog, subfamily C, member 27
DNM1 dynamin 1
DNM1P46 dynamin 1 pseudogene 46
DNMBP-AS1 DNMBP antisense RNA 1
DOCK5 dedicator of cytokinesis 5
DRD3 dopamine receptor D3
DUSP4 dual specificity phosphatase 4
ECHDC2 enoyl CoA hydratase domain containing 2
EML2 echinoderm microtubule associated protein like 2
EMX1 empty spiracles homeobox 1
ENGASE endo-beta-N-acetylglucosaminidase
ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4
EOMES eomesodermin
EPOR erythropoietin receptor
ERICH4 glutamate-rich 4
ESRRA estrogen-related receptor alpha
EXOC2 exocyst complex component 2
EXOC3L1 exocyst complex component 3-like 1
FAM110A family with sequence similarity 110, member A
FAM13C family with sequence similarity 13, member C
FAM157A family with sequence similarity 157, member A
FAM160B2 family with sequence similarity 160, member B2
FAM162B family with sequence similarity 162, member B
FAM205BP transmembrane protein C9orf144B pseudogene
FAM210A family with sequence similarity 210, member A
FAM43A family with sequence similarity 43, member A
FAM90A7P putative protein FAM90A7
FASTKD1 FAST kinase domains 1
FBXL20 F-box and leucine-rich repeat protein 20
FERMT3 fermitin family member 3
FGF17 fibroblast growth factor 17
FHL5 four and a half LIM domains 5
FLCN folliculin
FOLR2 folate receptor 2 (fetal)
FOXN2 forkhead box N2
GABRD gamma-aminobutyric acid (GABA) A receptor, delta
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GANC glucosidase, alpha; neutral C
GATA1 GATA binding protein 1 (globin transcription factor 1)
GDF15 growth differentiation factor 15
GFAP glial fibrillary acidic protein
GIPR gastric inhibitory polypeptide receptor
GJC1 gap junction protein, gamma 1, 45kDa
GK glycerol kinase
GLRA2 glycine receptor, alpha 2
GNG2 guanine nucleotide binding protein (G protein), gamma 2
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
GOLGA6L5P golgin A6 family-like 5, pseudogene
GP9 glycoprotein IX (platelet)
GPBAR1 G protein-coupled bile acid receptor 1
GPR34 G protein-coupled receptor 34
GRAMD3 GRAM domain containing 3
GRIK3 glutamate receptor, ionotropic, kainate 3
GRM8 glutamate receptor, metabotropic 8
GSG1 germ cell associated 1
GULP1 GULP, engulfment adaptor PTB domain containing 1
H1FOO H1 histone family, member O, oocyte-specific
HBA1 hemoglobin, alpha 1
HBA2 hemoglobin, alpha 2
HBB hemoglobin, beta
HBM hemoglobin, mu
HCN2 hyperpolarization activated cyclic nucleotide gated potassium channel 2
HIGD1B HIG1 hypoxia inducible domain family, member 1B
HIST1H4B histone cluster 1, H4b
HIST3H3 histone cluster 3, H3
HMG20B high mobility group 20B
HPD 4-hydroxyphenylpyruvate dioxygenase
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD)
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1
HSPA1A heat shock 70kDa protein 1A
HSPA1B heat shock 70kDa protein 1B
HSPA6 heat shock 70kDa protein 6 (HSP70B')
HTR2B 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
HYAL1 hyaluronoglucosaminidase 1
IBSP integrin-binding sialoprotein
ICAM2 intercellular adhesion molecule 2
IER5 immediate early response 5
IFFO1 intermediate filament family orphan 1
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
INTS10 integrator complex subunit 10
IQGAP2 IQ motif containing GTPase activating protein 2
ITGA2B integrin, alpha 2b (platelet glycoprotein IIb of IIb/IIIa complex, antigen CD41)
JPH2 junctophilin 2
JUN jun proto-oncogene
KCNJ9 potassium channel, inwardly rectifying subfamily J, member 9
KCNK17 potassium channel, two pore domain subfamily K, member 17
KIAA0895L KIAA0895-like
KLHL17 kelch-like family member 17
KREMEN1 kringle containing transmembrane protein 1
LENG8 leukocyte receptor cluster (LRC) member 8
LEPROTL1 leptin receptor overlapping transcript-like 1
LHX1 LIM homeobox 1
LINC00092 long intergenic non-protein coding RNA 92
LINC00319 long intergenic non-protein coding RNA 319
LINC00483 long intergenic non-protein coding RNA 483
LNP1 leukemia NUP98 fusion partner 1
LOC100272216 uncharacterized LOC100272216
LOC389033 placenta-specific 9 pseudogene
LOC646471 uncharacterized LOC646471
LOC729609 uncharacterized LOC729609
LONRF1 LON peptidase N-terminal domain and ring finger 1
LPIN3 lipin 3
LPL lipoprotein lipase
MAPT microtubule-associated protein tau
MARCH3 membrane-associated ring finger (C3HC4) 3, E3 ubiquitin protein ligase
MAT2A methionine adenosyltransferase II, alpha
MBNL2 muscleblind-like splicing regulator 2
MFSD12 major facilitator superfamily domain containing 12
MICU3 mitochondrial calcium uptake family, member 3
MRVI1 murine retrovirus integration site 1 homolog
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MSC musculin
MTMR9 myotubularin related protein 9
MTMR9LP myotubularin related protein 9-like, pseudogene
NAPB N-ethylmaleimide-sensitive factor attachment protein, beta
NAT1 N-acetyltransferase 1 (arylamine N-acetyltransferase)
NEAT1 nuclear paraspeckle assembly transcript 1 (non-protein coding)
NHLH1 nescient helix loop helix 1
NOV nephroblastoma overexpressed
NPM2 nucleophosmin/nucleoplasmin 2
NTN4 netrin 4
NTNG2 netrin G2
NXPH4 neurexophilin 4
OLIG2 oligodendrocyte lineage transcription factor 2
OPRD1 opioid receptor, delta 1
OR1G1 olfactory receptor, family 1, subfamily G, member 1
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR2A25 olfactory receptor, family 2, subfamily A, member 25
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR52W1 olfactory receptor, family 52, subfamily W, member 1
OR5B3 olfactory receptor, family 5, subfamily B, member 3
OR7D2 olfactory receptor, family 7, subfamily D, member 2
PCDHGA3 protocadherin gamma subfamily A, 3
PCSK2 proprotein convertase subtilisin/kexin type 2
PDDC1 Parkinson disease 7 domain containing 1
PDLIM3 PDZ and LIM domain 3
PF4 platelet factor 4
PGRMC2 progesterone receptor membrane component 2
PHLDB2 pleckstrin homology-like domain, family B, member 2
PIK3R1 phosphoinositide-3-kinase, regulatory subunit 1 (alpha)
PKD1 polycystic kidney disease 1 (autosomal dominant)
PLA2G4A phospholipase A2, group IVA (cytosolic, calcium-dependent)
PLAT plasminogen activator, tissue
PLXDC1 plexin domain containing 1
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD)
PP14571 uncharacterized LOC100130449
PPBP pro-platelet basic protein (chemokine (C-X-C motif) ligand 7)
PPIEL peptidylprolyl isomerase E-like pseudogene
PPP1R12C protein phosphatase 1, regulatory subunit 12C
PPP1R14A protein phosphatase 1, regulatory (inhibitor) subunit 14A
PPP1R15A protein phosphatase 1, regulatory subunit 15A
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP2R5B protein phosphatase 2, regulatory subunit B', beta
PRR29 proline rich 29
PSD3 pleckstrin and Sec7 domain containing 3
PTCH1 patched 1
PTPDC1 protein tyrosine phosphatase domain containing 1
PYHIN1 pyrin and HIN domain family, member 1
RASGEF1B RasGEF domain family, member 1B
RBM6 RNA binding motif protein 6
RBPJL recombination signal binding protein for immunoglobulin kappa J region-like
REXO1L1P REX1, RNA exonuclease 1 homolog (S. cerevisiae)-like 1, pseudogene
RFPL3 ret finger protein-like 3
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RNASE12 ribonuclease, RNase A family, 12 (non-active)
RNF14 ring finger protein 14
RTN2 reticulon 2
RWDD2B RWD domain containing 2B
SCN2A sodium channel, voltage gated, type II alpha subunit
SGCA sarcoglycan, alpha (50kDa dystrophin-associated glycoprotein)
SIGLEC11 sialic acid binding Ig-like lectin 11
SIGLEC16 sialic acid binding Ig-like lectin 16 (gene/pseudogene)
SLC25A43 solute carrier family 25, member 43
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SLC35D1 solute carrier family 35 (UDP-GlcA/UDP-GalNAc transporter), member D1
SLC6A1 solute carrier family 6 (neurotransmitter transporter), member 1
SLFN11 schlafen family member 11
SMC6 structural maintenance of chromosomes 6
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SNORA51 small nucleolar RNA, H/ACA box 51
SOS2 son of sevenless homolog 2 (Drosophila)
SPARCL1 SPARC-like 1 (hevin)
SPTSSA serine palmitoyltransferase, small subunit A
STAB1 stabilin 1
SVIP small VCP/p97-interacting protein
SYDE1 synapse defective 1, Rho GTPase, homolog 1 (C. elegans)
SYT17 synaptotagmin XVII
SYTL2 synaptotagmin-like 2
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
TM6SF2 transmembrane 6 superfamily member 2
TMEM171 transmembrane protein 171
TMEM64 transmembrane protein 64
TNC tenascin C
TRPC6 transient receptor potential cation channel, subfamily C, member 6
TSSK3 testis-specific serine kinase 3
TTC14 tetratricopeptide repeat domain 14
UBE2Q2P1 ubiquitin-conjugating enzyme E2Q family member 2 pseudogene 1
UBL4B ubiquitin-like 4B
USP6 ubiquitin specific peptidase 6
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae)
WDFY2 WD repeat and FYVE domain containing 2
XKR6 XK, Kell blood group complex subunit-related family, member 6
YPEL5 yippee-like 5 (Drosophila)
ZBTB1 zinc finger and BTB domain containing 1
ZHX1 zinc fingers and homeoboxes 1
ZMYND12 zinc finger, MYND-type containing 12

low expression

Symbol Name
MAP2K5 mitogen-activated protein kinase kinase 5
TMEM185B transmembrane protein 185B