Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U8-06A-11R-A32P-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

347 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U8-06A-11R-A32P-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD12B abhydrolase domain containing 12B
ACOT4 acyl-CoA thioesterase 4
ACSBG2 acyl-CoA synthetase bubblegum family member 2
ACY1 aminoacylase 1
ADAM20 ADAM metallopeptidase domain 20
AIMP1 aminoacyl tRNA synthetase complex-interacting multifunctional protein 1
AKR1C6P aldo-keto reductase family 1, member C6, pseudogene
ALAD aminolevulinate dehydratase
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
AMZ2P1 archaelysin family metallopeptidase 2 pseudogene 1
ANKRD36 ankyrin repeat domain 36
ANKRD46 ankyrin repeat domain 46
ANP32B acidic (leucine-rich) nuclear phosphoprotein 32 family, member B
ANP32E acidic (leucine-rich) nuclear phosphoprotein 32 family, member E
AP3S1 adaptor-related protein complex 3, sigma 1 subunit
ARG2 arginase 2
ARGFX arginine-fifty homeobox
ARHGEF39 Rho guanine nucleotide exchange factor (GEF) 39
ARMS2 age-related maculopathy susceptibility 2
ARPC3 actin related protein 2/3 complex, subunit 3, 21kDa
ARV1 ARV1 homolog (S. cerevisiae)
ASB9 ankyrin repeat and SOCS box containing 9
ASCL1 achaete-scute family bHLH transcription factor 1
ATF7IP2 activating transcription factor 7 interacting protein 2
ATP5C1 ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1
ATPIF1 ATPase inhibitory factor 1
AURKC aurora kinase C
BAGE B melanoma antigen
BARHL1 BarH-like homeobox 1
BDH2 3-hydroxybutyrate dehydrogenase, type 2
BOLA1 bolA family member 1
BREA2 breast cancer estrogen-induced apoptosis 2
C11ORF31 chromosome 11 open reading frame 31
C11ORF48
C11ORF65 chromosome 11 open reading frame 65
C11ORF71 chromosome 11 open reading frame 71
C11ORF85 chromosome 11 open reading frame 85
C12ORF45 chromosome 12 open reading frame 45
C12ORF76 chromosome 12 open reading frame 76
C14ORF142 chromosome 14 open reading frame 142
C14ORF2 chromosome 14 open reading frame 2
C16ORF87 chromosome 16 open reading frame 87
C16ORF90 chromosome 16 open reading frame 90
C1ORF100 chromosome 1 open reading frame 100
C2ORF66 chromosome 2 open reading frame 66
C3ORF62 chromosome 3 open reading frame 62
C8ORF76 chromosome 8 open reading frame 76
C9ORF40 chromosome 9 open reading frame 40
CAAP1 caspase activity and apoptosis inhibitor 1
CACYBP calcyclin binding protein
CADPS Ca++-dependent secretion activator
CAMKMT calmodulin-lysine N-methyltransferase
CBWD6 COBW domain containing 6
CBX3 chromobox homolog 3
CCDC14 coiled-coil domain containing 14
CCDC160 coiled-coil domain containing 160
CCDC36 coiled-coil domain containing 36
CCL8 chemokine (C-C motif) ligand 8
CDRT15 CMT1A duplicated region transcript 15
CELA2B chymotrypsin-like elastase family, member 2B
CENPU centromere protein U
CETN3 centrin, EF-hand protein, 3
CFDP1 craniofacial development protein 1
CGNL1 cingulin-like 1
CLDN1 claudin 1
CLTA clathrin, light chain A
CMC2 C-x(9)-C motif containing 2
CNRIP1 cannabinoid receptor interacting protein 1
COA6 cytochrome c oxidase assembly factor 6
COMMD10 COMM domain containing 10
COX20 COX20 cytochrome c oxidase assembly factor
CTAG1B cancer/testis antigen 1B
DDX3Y DEAD (Asp-Glu-Ala-Asp) box helicase 3, Y-linked
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like
DEPDC4 DEP domain containing 4
DISC2 disrupted in schizophrenia 2 (non-protein coding)
DLL3 delta-like 3 (Drosophila)
DMC1 DNA meiotic recombinase 1
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8
DPH6 diphthamine biosynthesis 6
DPPA3 developmental pluripotency associated 3
DSCC1 DNA replication and sister chromatid cohesion 1
DSCR4 Down syndrome critical region 4
DSCR8 Down syndrome critical region 8
DTD2 D-tyrosyl-tRNA deacylase 2 (putative)
EBAG9 estrogen receptor binding site associated, antigen, 9
EED embryonic ectoderm development
EID2 EP300 interacting inhibitor of differentiation 2
EIF1AY eukaryotic translation initiation factor 1A, Y-linked
ENOSF1 enolase superfamily member 1
ENY2 enhancer of yellow 2 homolog (Drosophila)
ERH enhancer of rudimentary homolog (Drosophila)
EXOSC3 exosome component 3
EXOSC8 exosome component 8
FAM162A family with sequence similarity 162, member A
FAM91A1 family with sequence similarity 91, member A1
FBXO43 F-box protein 43
FCN1 ficolin (collagen/fibrinogen domain containing) 1
FGF13 fibroblast growth factor 13
FIGLA folliculogenesis specific basic helix-loop-helix
FKBP3 FK506 binding protein 3, 25kDa
FLJ12825 uncharacterized LOC440101
FOXR2 forkhead box R2
GALK2 galactokinase 2
GAR1 GAR1 ribonucleoprotein
GGCT gamma-glutamylcyclotransferase
GJA9 gap junction protein, alpha 9, 59kDa
GJB6 gap junction protein, beta 6, 30kDa
GNA14 guanine nucleotide binding protein (G protein), alpha 14
GPATCH4 G patch domain containing 4
GPHA2 glycoprotein hormone alpha 2
GSDMD gasdermin D
GTF2H2C GTF2H2 family member C
H3F3A H3 histone, family 3A
HAUS1 HAUS augmin-like complex, subunit 1
HESX1 HESX homeobox 1
HIST2H4A histone cluster 2, H4a
HMGN1 high mobility group nucleosome binding domain 1
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HMHB1 histocompatibility (minor) HB-1
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPD heterogeneous nuclear ribonucleoprotein D (AU-rich element RNA binding protein 1, 37kDa)
HOXC10 homeobox C10
HOXC4 homeobox C4
HPRT1 hypoxanthine phosphoribosyltransferase 1
HRSP12 heat-responsive protein 12
HSBP1 heat shock factor binding protein 1
HSD17B7P2 hydroxysteroid (17-beta) dehydrogenase 7 pseudogene 2
HSF4 heat shock transcription factor 4
HYLS1 hydrolethalus syndrome 1
IDNK idnK, gluconokinase homolog (E. coli)
IFITM2 interferon induced transmembrane protein 2
IFNA5 interferon, alpha 5
IL5 interleukin 5
IMPACT impact RWD domain protein
INE2 inactivation escape 2 (non-protein coding)
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KDM5D lysine (K)-specific demethylase 5D
KIAA0101 KIAA0101
KIF17 kinesin family member 17
KLF1 Kruppel-like factor 1 (erythroid)
LAMTOR3 late endosomal/lysosomal adaptor, MAPK and MTOR activator 3
LDHA lactate dehydrogenase A
LHFPL3 lipoma HMGIC fusion partner-like 3
LILRA3 leukocyte immunoglobulin-like receptor, subfamily A (without TM domain), member 3
LILRA5 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
LILRA6 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 6
LILRB2 leukocyte immunoglobulin-like receptor, subfamily B (with TM and ITIM domains), member 2
LIMD2 LIM domain containing 2
LINC00200 long intergenic non-protein coding RNA 200
LINC00467 long intergenic non-protein coding RNA 467
LOC100240734 uncharacterized LOC100240734
LOC100240735 uncharacterized LOC100240735
LOC256880 uncharacterized LOC256880
LOC389705 chromosome 4 open reading frame 27 pseudogene
LOC643387 TAR DNA binding protein pseudogene
LOC729609 uncharacterized LOC729609
LPGAT1 lysophosphatidylglycerol acyltransferase 1
LRCH2 leucine-rich repeats and calponin homology (CH) domain containing 2
LSM6 LSM6 homolog, U6 small nuclear RNA associated (S. cerevisiae)
LYPLAL1 lysophospholipase-like 1
MAGEA1 melanoma antigen family A1
MAGEB2 melanoma antigen family B2
MED11 mediator complex subunit 11
MED7 mediator complex subunit 7
MINOS1 mitochondrial inner membrane organizing system 1
MITD1 MIT, microtubule interacting and transport, domain containing 1
MPPED2 metallophosphoesterase domain containing 2
MRFAP1L1 Morf4 family associated protein 1-like 1
MRPL1 mitochondrial ribosomal protein L1
MRPL13 mitochondrial ribosomal protein L13
MRPL16 mitochondrial ribosomal protein L16
MRPL32 mitochondrial ribosomal protein L32
MRPL50 mitochondrial ribosomal protein L50
MRPS21 mitochondrial ribosomal protein S21
MTERF1 mitochondrial transcription termination factor 1
MYBPHL myosin binding protein H-like
MYH8 myosin, heavy chain 8, skeletal muscle, perinatal
MYT1L myelin transcription factor 1-like
NAA11 N(alpha)-acetyltransferase 11, NatA catalytic subunit
NBL1 neuroblastoma 1, DAN family BMP antagonist
NDUFAF2 NADH dehydrogenase (ubiquinone) complex I, assembly factor 2
NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa
NDUFC1 NADH dehydrogenase (ubiquinone) 1, subcomplex unknown, 1, 6kDa
NEXN nexilin (F actin binding protein)
NKX2-4 NK2 homeobox 4
NMRK1 nicotinamide riboside kinase 1
NOP58 NOP58 ribonucleoprotein
NPFFR2 neuropeptide FF receptor 2
NQO1 NAD(P)H dehydrogenase, quinone 1
NR2E3 nuclear receptor subfamily 2, group E, member 3
NRG4 neuregulin 4
NUDT5 nudix (nucleoside diphosphate linked moiety X)-type motif 5
NUF2 NUF2, NDC80 kinetochore complex component
NXT2 nuclear transport factor 2-like export factor 2
OR10AD1 olfactory receptor, family 10, subfamily AD, member 1
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR4E2 olfactory receptor, family 4, subfamily E, member 2
OR5D14 olfactory receptor, family 5, subfamily D, member 14
OR7D4 olfactory receptor, family 7, subfamily D, member 4
OR8B3 olfactory receptor, family 8, subfamily B, member 3
OSTF1 osteoclast stimulating factor 1
PABPN1 poly(A) binding protein, nuclear 1
PAGE2 P antigen family, member 2 (prostate associated)
PAGE5 P antigen family, member 5 (prostate associated)
PASD1 PAS domain containing 1
PATE1 prostate and testis expressed 1
PATE3 prostate and testis expressed 3
PDZD3 PDZ domain containing 3
PIGH phosphatidylinositol glycan anchor biosynthesis, class H
PIR pirin (iron-binding nuclear protein)
PLA2G16 phospholipase A2, group XVI
PLA2G2C phospholipase A2, group IIC
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
PLGLA plasminogen-like A (pseudogene)
PMCHL1 pro-melanin-concentrating hormone-like 1, pseudogene
PNCK pregnancy up-regulated nonubiquitous CaM kinase
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPAN-P2RY11 PPAN-P2RY11 readthrough
PRDX6 peroxiredoxin 6
PRKY protein kinase, Y-linked, pseudogene
PROCA1 protein interacting with cyclin A1
PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene
PRSS21 protease, serine, 21 (testisin)
PRSS45 protease, serine, 45
PSMA3 proteasome (prosome, macropain) subunit, alpha type, 3
PSME1 proteasome (prosome, macropain) activator subunit 1 (PA28 alpha)
PSME2 proteasome (prosome, macropain) activator subunit 2 (PA28 beta)
PSRC1 proline/serine-rich coiled-coil 1
PTMA prothymosin, alpha
PTTG1 pituitary tumor-transforming 1
PURA purine-rich element binding protein A
PUS3 pseudouridylate synthase 3
PXT1 peroxisomal, testis specific 1
RAD51B RAD51 paralog B
RARRES3 retinoic acid receptor responder (tazarotene induced) 3
RBMY1A1 RNA binding motif protein, Y-linked, family 1, member A1
RBMY1E RNA binding motif protein, Y-linked, family 1, member E
RBP7 retinol binding protein 7, cellular
RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
RDM1 RAD52 motif containing 1
RELL1 RELT-like 1
RFESD Rieske (Fe-S) domain containing
RIMKLB ribosomal modification protein rimK-like family member B
RNASE1 ribonuclease, RNase A family, 1 (pancreatic)
RNF138 ring finger protein 138, E3 ubiquitin protein ligase
RNF175 ring finger protein 175
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNF212 ring finger protein 212
RPL27 ribosomal protein L27
RPL39 ribosomal protein L39
RPS4Y1 ribosomal protein S4, Y-linked 1
RWDD2B RWD domain containing 2B
RWDD3 RWD domain containing 3
SARNP SAP domain containing ribonucleoprotein
SCARNA21 small Cajal body-specific RNA 21
SET SET nuclear proto-oncogene
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SKA2 spindle and kinetochore associated complex subunit 2
SLBP stem-loop binding protein
SLC22A13 solute carrier family 22 (organic anion/urate transporter), member 13
SLC25A2 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 2
SLC30A8 solute carrier family 30 (zinc transporter), member 8
SNHG10 small nucleolar RNA host gene 10
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA5A small nucleolar RNA, H/ACA box 5A
SNORA72 small nucleolar RNA, H/ACA box 72
SNRPD1 small nuclear ribonucleoprotein D1 polypeptide 16kDa
SNRPG small nuclear ribonucleoprotein polypeptide G
SNX10 sorting nexin 10
SPACA6P sperm acrosome associated 6, pseudogene
SPAG1 sperm associated antigen 1
SPATA24 spermatogenesis associated 24
SPATS2 spermatogenesis associated, serine-rich 2
SPC25 SPC25, NDC80 kinetochore complex component
SPDYA speedy/RINGO cell cycle regulator family member A
SRP14 signal recognition particle 14kDa (homologous Alu RNA binding protein)
SRP19 signal recognition particle 19kDa
SRP9 signal recognition particle 9kDa
SRR serine racemase
SRSF1 serine/arginine-rich splicing factor 1
SS18 synovial sarcoma translocation, chromosome 18
SS18L2 synovial sarcoma translocation gene on chromosome 18-like 2
SSX1 synovial sarcoma, X breakpoint 1
SSX2 synovial sarcoma, X breakpoint 2
SSX3 synovial sarcoma, X breakpoint 3
SSX7 synovial sarcoma, X breakpoint 7
SSX8 synovial sarcoma, X breakpoint 8
STK3 serine/threonine kinase 3
STK39 serine threonine kinase 39
STMN1 stathmin 1
STX6 syntaxin 6
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
SUMO1 small ubiquitin-like modifier 1
SUMO1P3 SUMO1 pseudogene 3 (functional)
SUMO2 small ubiquitin-like modifier 2
SYNC syncoilin, intermediate filament protein
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
TARDBP TAR DNA binding protein
TAS2R46 taste receptor, type 2, member 46
TBCA tubulin folding cofactor A
TCEAL4 transcription elongation factor A (SII)-like 4
TCP10 t-complex 10
TEX101 testis expressed 101
TGDS TDP-glucose 4,6-dehydratase
TIGD1 tigger transposable element derived 1
TIMM8B translocase of inner mitochondrial membrane 8 homolog B (yeast)
TMA7 translation machinery associated 7 homolog (S. cerevisiae)
TMED6 transmembrane emp24 protein transport domain containing 6
TMEFF1 transmembrane protein with EGF-like and two follistatin-like domains 1
TMEM126B transmembrane protein 126B
TMEM14E transmembrane protein 14E
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast)
TPD52L3 tumor protein D52-like 3
TPTE2P3 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 3
TRA2A transformer 2 alpha homolog (Drosophila)
TRAPPC4 trafficking protein particle complex 4
TRNT1 tRNA nucleotidyl transferase, CCA-adding, 1
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TSPEAR-AS2 TSPEAR antisense RNA 2
TTPA tocopherol (alpha) transfer protein
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TXLNGY taxilin gamma pseudogene, Y-linked
TXNL1 thioredoxin-like 1
UBE2N ubiquitin-conjugating enzyme E2N
UCHL5 ubiquitin carboxyl-terminal hydrolase L5
USP9Y ubiquitin specific peptidase 9, Y-linked
VN1R2 vomeronasal 1 receptor 2
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae)
VSTM2L V-set and transmembrane domain containing 2 like
WDYHV1 WDYHV motif containing 1
WIBG within bgcn homolog (Drosophila)
XPA xeroderma pigmentosum, complementation group A
ZFY zinc finger protein, Y-linked
ZNF192P1 zinc finger protein 192 pseudogene 1
ZNF233 zinc finger protein 233
ZNF252P-AS1 ZNF252P antisense RNA 1
ZNF483 zinc finger protein 483
ZNF534 zinc finger protein 534
ZNF560 zinc finger protein 560
ZNF563 zinc finger protein 563
ZNF658 zinc finger protein 658
ZNF706 zinc finger protein 706
ZNF883 zinc finger protein 883