Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U4-06A-11R-A32P-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

428 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-GN-A4U4-06A-11R-A32P-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASDHPPT aminoadipate-semialdehyde dehydrogenase-phosphopantetheinyl transferase
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADCY9 adenylate cyclase 9
ADPRM ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AKAP6 A kinase (PRKA) anchor protein 6
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12
ANGPTL3 angiopoietin-like 3
ANKRD26 ankyrin repeat domain 26
ANKRD46 ankyrin repeat domain 46
ANP32A-IT1 ANP32A intronic transcript 1
AP3M2 adaptor-related protein complex 3, mu 2 subunit
APLF aprataxin and PNKP like factor
APOC4 apolipoprotein C-IV
ARGFXP2 arginine-fifty homeobox pseudogene 2
ARHGAP19 Rho GTPase activating protein 19
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARIH2OS ariadne homolog 2 opposite strand
ARL14EP ADP-ribosylation factor-like 14 effector protein
ASCL1 achaete-scute family bHLH transcription factor 1
ATE1 arginyltransferase 1
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
BAIAP3 BAI1-associated protein 3
BCAS3 breast carcinoma amplified sequence 3
BFAR bifunctional apoptosis regulator
BMPR1A bone morphogenetic protein receptor, type IA
BTF3 basic transcription factor 3
BTN2A3P butyrophilin, subfamily 2, member A3, pseudogene
C11ORF1 chromosome 11 open reading frame 1
C11ORF94 chromosome 11 open reading frame 94
C17ORF47 chromosome 17 open reading frame 47
C3ORF17 chromosome 3 open reading frame 17
C8ORF37 chromosome 8 open reading frame 37
C9ORF40 chromosome 9 open reading frame 40
C9ORF91 chromosome 9 open reading frame 91
CALML6 calmodulin-like 6
CAT catalase
CCAR1 cell division cycle and apoptosis regulator 1
CCBL2 cysteine conjugate-beta lyase 2
CCDC121 coiled-coil domain containing 121
CCDC125 coiled-coil domain containing 125
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC183 coiled-coil domain containing 183
CCDC43 coiled-coil domain containing 43
CCDC7 coiled-coil domain containing 7
CCNG1 cyclin G1
CCNL1 cyclin L1
CCP110 centriolar coiled coil protein 110kDa
CCT8 chaperonin containing TCP1, subunit 8 (theta)
CD200R1 CD200 receptor 1
CD200R1L CD200 receptor 1-like
CDC42EP3 CDC42 effector protein (Rho GTPase binding) 3
CDK11A cyclin-dependent kinase 11A
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CDNF cerebral dopamine neurotrophic factor
CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21
CEP350 centrosomal protein 350kDa
CIPC CLOCK-interacting pacemaker
CLEC1A C-type lectin domain family 1, member A
CLTA clathrin, light chain A
CMTM7 CKLF-like MARVEL transmembrane domain containing 7
CNRIP1 cannabinoid receptor interacting protein 1
CNTNAP3 contactin associated protein-like 3
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
CPEB4 cytoplasmic polyadenylation element binding protein 4
CRYL1 crystallin, lambda 1
CSTF2T cleavage stimulation factor, 3' pre-RNA, subunit 2, 64kDa, tau variant
CTBP2 C-terminal binding protein 2
CTC1 CTS telomere maintenance complex component 1
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CUTC cutC copper transporter
CYCSP52 cytochrome c, somatic pseudogene 52
CYP4A22 cytochrome P450, family 4, subfamily A, polypeptide 22
D2HGDH D-2-hydroxyglutarate dehydrogenase
DAB2IP DAB2 interacting protein
DAPK1 death-associated protein kinase 1
DAZ1 deleted in azoospermia 1
DAZ2 deleted in azoospermia 2
DAZ3 deleted in azoospermia 3
DAZ4 deleted in azoospermia 4
DCLRE1C DNA cross-link repair 1C
DDIT4 DNA-damage-inducible transcript 4
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32
DLL4 delta-like 4 (Drosophila)
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22
DNM1P46 dynamin 1 pseudogene 46
DNMT3A DNA (cytosine-5-)-methyltransferase 3 alpha
DSCR10 Down syndrome critical region 10 (non-protein coding)
DSCR3 Down syndrome critical region 3
DUSP12 dual specificity phosphatase 12
DUSP4 dual specificity phosphatase 4
DUSP5 dual specificity phosphatase 5
DUSP6 dual specificity phosphatase 6
DZIP1L DAZ interacting zinc finger protein 1-like
EGR1 early growth response 1
EGR3 early growth response 3
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
EID2B EP300 interacting inhibitor of differentiation 2B
EIF1AY eukaryotic translation initiation factor 1A, Y-linked
EIF3A eukaryotic translation initiation factor 3, subunit A
EIF3H eukaryotic translation initiation factor 3, subunit H
EIF4A2 eukaryotic translation initiation factor 4A2
EIF4B eukaryotic translation initiation factor 4B
EPB41L4A-AS1 EPB41L4A antisense RNA 1
EPHA2 EPH receptor A2
ERCC6 excision repair cross-complementation group 6
ERVFRD-1 endogenous retrovirus group FRD, member 1
EXD3 exonuclease 3'-5' domain containing 3
EXOC6 exocyst complex component 6
EXOC6B exocyst complex component 6B
EXT1 exostosin glycosyltransferase 1
F11R F11 receptor
F2R coagulation factor II (thrombin) receptor
FAM106A family with sequence similarity 106, member A
FAM149B1 family with sequence similarity 149, member B1
FAM166A family with sequence similarity 166, member A
FAM175A family with sequence similarity 175, member A
FAM213A family with sequence similarity 213, member A
FAM21A family with sequence similarity 21, member A
FAM45A family with sequence similarity 45, member A
FAM45B family with sequence similarity 45, member A pseudogene
FEM1B fem-1 homolog b (C. elegans)
FIP1L1 factor interacting with PAPOLA and CPSF1
FNIP2 folliculin interacting protein 2
FOXH1 forkhead box H1
FTX FTX transcript, XIST regulator (non-protein coding)
FXR1 fragile X mental retardation, autosomal homolog 1
FZD6 frizzled class receptor 6
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
GALC galactosylceramidase
GALE UDP-galactose-4-epimerase
GAPDHS glyceraldehyde-3-phosphate dehydrogenase, spermatogenic
GAS5 growth arrest-specific 5 (non-protein coding)
GATA4 GATA binding protein 4
GDF15 growth differentiation factor 15
GDPD1 glycerophosphodiester phosphodiesterase domain containing 1
GLS glutaminase
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GNG12 guanine nucleotide binding protein (G protein), gamma 12
GPATCH2 G patch domain containing 2
GPATCH4 G patch domain containing 4
GRAMD3 GRAM domain containing 3
GREB1 growth regulation by estrogen in breast cancer 1
GREB1L growth regulation by estrogen in breast cancer-like
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GYPB glycophorin B (MNS blood group)
HELLS helicase, lymphoid-specific
HERC4 HECT and RLD domain containing E3 ubiquitin protein ligase 4
HES1 hes family bHLH transcription factor 1
HHEX hematopoietically expressed homeobox
HIP1R huntingtin interacting protein 1 related
HIST1H3H histone cluster 1, H3h
HKDC1 hexokinase domain containing 1
HMGA2 high mobility group AT-hook 2
HNRNPA1 heterogeneous nuclear ribonucleoprotein A1
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2
HNRNPC heterogeneous nuclear ribonucleoprotein C (C1/C2)
HNRNPDL heterogeneous nuclear ribonucleoprotein D-like
HNRNPF heterogeneous nuclear ribonucleoprotein F
HOOK1 hook microtubule-tethering protein 1
HOXC12 homeobox C12
HPGD hydroxyprostaglandin dehydrogenase 15-(NAD)
IDI1 isopentenyl-diphosphate delta isomerase 1
IDI2-AS1 IDI2 antisense RNA 1
IL6R interleukin 6 receptor
IMPACT impact RWD domain protein
IMPDH2 IMP (inosine 5'-monophosphate) dehydrogenase 2
INADL InaD-like (Drosophila)
IQGAP2 IQ motif containing GTPase activating protein 2
ITLN1 intelectin 1 (galactofuranose binding)
ITLN2 intelectin 2
JRK Jrk homolog (mouse)
JRKL JRK-like
KBTBD3 kelch repeat and BTB (POZ) domain containing 3
KCNV2 potassium channel, voltage gated modifier subfamily V, member 2
KDM5D lysine (K)-specific demethylase 5D
KIAA0141 KIAA0141
KIAA0355 KIAA0355
KIF17 kinesin family member 17
KIF3A kinesin family member 3A
KIRREL kin of IRRE like (Drosophila)
KLF9 Kruppel-like factor 9
KLHDC2 kelch domain containing 2
KLHL13 kelch-like family member 13
KLHL36 kelch-like family member 36
KRT18 keratin 18, type I
LEPROT leptin receptor overlapping transcript
LGALS12 lectin, galactoside-binding, soluble, 12
LGTN ligatin
LIN28A lin-28 homolog A (C. elegans)
LOC115110 uncharacterized LOC115110
LOC283922 pyruvate dehydrogenase phosphatase regulatory subunit pseudogene
LOC391322 D-dopachrome tautomerase-like
LPL lipoprotein lipase
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LRRC75A-AS1 LRRC75A antisense RNA 1
LRRC8C leucine rich repeat containing 8 family, member C
LSM11 LSM11, U7 small nuclear RNA associated
LTA4H leukotriene A4 hydrolase
LYPLAL1 lysophospholipase-like 1
MAGEA4 melanoma antigen family A4
MAMDC2 MAM domain containing 2
MAML2 mastermind-like 2 (Drosophila)
MAML3 mastermind-like 3 (Drosophila)
MAPKAPK5-AS1 MAPKAPK5 antisense RNA 1
MBOAT1 membrane bound O-acyltransferase domain containing 1
MC5R melanocortin 5 receptor
MED28 mediator complex subunit 28
METAP2 methionyl aminopeptidase 2
MIA2 melanoma inhibitory activity 2
MID1IP1 MID1 interacting protein 1
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MME membrane metallo-endopeptidase
MOAP1 modulator of apoptosis 1
MORC2 MORC family CW-type zinc finger 2
MOSPD2 motile sperm domain containing 2
MRPL35 mitochondrial ribosomal protein L35
MRRF mitochondrial ribosome recycling factor
MST1L macrophage stimulating 1-like
MYLIP myosin regulatory light chain interacting protein
MYO3A myosin IIIA
NAP1L1 nucleosome assembly protein 1-like 1
NBPF15 neuroblastoma breakpoint family, member 15
NDUFA10 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 10, 42kDa
NELL1 NEL-like 1 (chicken)
NHLRC2 NHL repeat containing 2
NIPAL1 NIPA-like domain containing 1
NIT2 nitrilase family, member 2
NNT nicotinamide nucleotide transhydrogenase
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOX3 NADPH oxidase 3
NOXA1 NADPH oxidase activator 1
NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin)
NPPB natriuretic peptide B
NR1I3 nuclear receptor subfamily 1, group I, member 3
NRN1 neuritin 1
NRROS negative regulator of reactive oxygen species
NSUN4 NOP2/Sun domain family, member 4
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6
NVL nuclear VCP-like
NXT2 nuclear transport factor 2-like export factor 2
OCLN occludin
OLIG1 oligodendrocyte transcription factor 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR52E8 olfactory receptor, family 52, subfamily E, member 8
OR8G2 olfactory receptor, family 8, subfamily G, member 2
PABPC1 poly(A) binding protein, cytoplasmic 1
PABPC3 poly(A) binding protein, cytoplasmic 3
PAGE2 P antigen family, member 2 (prostate associated)
PAGE5 P antigen family, member 5 (prostate associated)
PARD3B par-3 family cell polarity regulator beta
PCP2 Purkinje cell protein 2
PDLIM5 PDZ and LIM domain 5
PDP2 pyruvate dehyrogenase phosphatase catalytic subunit 2
PELI2 pellino E3 ubiquitin protein ligase family member 2
PHLDA1 pleckstrin homology-like domain, family A, member 1
PHLDB1 pleckstrin homology-like domain, family B, member 1
PKNOX1 PBX/knotted 1 homeobox 1
PKNOX2 PBX/knotted 1 homeobox 2
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLCB4 phospholipase C, beta 4
PLCL1 phospholipase C-like 1
PLEKHA1 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 1
PLSCR4 phospholipid scramblase 4
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
PNMAL1 paraneoplastic Ma antigen family-like 1
PNN pinin, desmosome associated protein
POC1B POC1 centriolar protein B
POLM polymerase (DNA directed), mu
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PPAN-P2RY11 PPAN-P2RY11 readthrough
PPM1K protein phosphatase, Mg2+/Mn2+ dependent, 1K
PRDX3 peroxiredoxin 3
PRKAB2 protein kinase, AMP-activated, beta 2 non-catalytic subunit
PRKAG1 protein kinase, AMP-activated, gamma 1 non-catalytic subunit
PRKAR1A protein kinase, cAMP-dependent, regulatory, type I, alpha
PRKG2 protein kinase, cGMP-dependent, type II
PRPF4B pre-mRNA processing factor 4B
PSPC1 paraspeckle component 1
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPN14 protein tyrosine phosphatase, non-receptor type 14
QARS glutaminyl-tRNA synthetase
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RAB6B RAB6B, member RAS oncogene family
RABGGTB Rab geranylgeranyltransferase, beta subunit
RAD51B RAD51 paralog B
RANBP10 RAN binding protein 10
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASSF3 Ras association (RalGDS/AF-6) domain family member 3
RAVER2 ribonucleoprotein, PTB-binding 2
RBM18 RNA binding motif protein 18
RBM20 RNA binding motif protein 20
RBMY2EP RNA binding motif protein, Y-linked, family 2, member E pseudogene
RBP7 retinol binding protein 7, cellular
RCOR3 REST corepressor 3
RERE arginine-glutamic acid dipeptide (RE) repeats
RFESD Rieske (Fe-S) domain containing
RGL3 ral guanine nucleotide dissociation stimulator-like 3
RND3 Rho family GTPase 3
RNF170 ring finger protein 170
RNF207 ring finger protein 207
RNF43 ring finger protein 43
RPL15 ribosomal protein L15
RPL17 ribosomal protein L17
RPL22 ribosomal protein L22
RPL23 ribosomal protein L23
RPL23A ribosomal protein L23a
RPL26 ribosomal protein L26
RPL27 ribosomal protein L27
RPL3 ribosomal protein L3
RPL30 ribosomal protein L30
RPL31 ribosomal protein L31
RPL39 ribosomal protein L39
RPL41 ribosomal protein L41
RPRD1A regulation of nuclear pre-mRNA domain containing 1A
RPS13 ribosomal protein S13
RPS14 ribosomal protein S14
RPS17 ribosomal protein S17
RPS23 ribosomal protein S23
RPS24 ribosomal protein S24
RPS25 ribosomal protein S25
RPS27 ribosomal protein S27
RPS27A ribosomal protein S27a
RPS29 ribosomal protein S29
RPS3A ribosomal protein S3A
RPS4Y1 ribosomal protein S4, Y-linked 1
RPS8 ribosomal protein S8
RPUSD3 RNA pseudouridylate synthase domain containing 3
RSL1D1 ribosomal L1 domain containing 1
RWDD2B RWD domain containing 2B
SAT1 spermidine/spermine N1-acetyltransferase 1
SDE2 SDE2 telomere maintenance homolog (S. pombe)
SECISBP2 SECIS binding protein 2
SEMA4G sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
SEPT11 septin 11
SGK1 serum/glucocorticoid regulated kinase 1
SHE Src homology 2 domain containing E
SIAE sialic acid acetylesterase
SIAH1 siah E3 ubiquitin protein ligase 1
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC25A3 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 3
SLC25A30 solute carrier family 25, member 30
SLC25A43 solute carrier family 25, member 43
SLC25A5 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5
SLC2A12 solute carrier family 2 (facilitated glucose transporter), member 12
SMC1B structural maintenance of chromosomes 1B
SMC3 structural maintenance of chromosomes 3
SMYD4 SET and MYND domain containing 4
SNHG8 small nucleolar RNA host gene 8
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA18 small nucleolar RNA, H/ACA box 18
SNORA40 small nucleolar RNA, H/ACA box 40
SNORA8 small nucleolar RNA, H/ACA box 8
SNORD1C small nucleolar RNA, C/D box 1C
SNRK SNF related kinase
SPATS2 spermatogenesis associated, serine-rich 2
SPICE1 spindle and centriole associated protein 1
SPRY4 sprouty homolog 4 (Drosophila)
SPTBN1 spectrin, beta, non-erythrocytic 1
SRFBP1 serum response factor binding protein 1
SRRM5 serine/arginine repetitive matrix 5
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
STARD8 StAR-related lipid transfer (START) domain containing 8
STK10 serine/threonine kinase 10
TATDN3 TatD DNase domain containing 3
TBC1D12 TBC1 domain family, member 12
TBC1D3H TBC1 domain family, member 3H
TBC1D4 TBC1 domain family, member 4
TDRD10 tudor domain containing 10
TET1 tet methylcytosine dioxygenase 1
TEX10 testis expressed 10
TGFBR1 transforming growth factor, beta receptor 1
THG1L tRNA-histidine guanylyltransferase 1-like (S. cerevisiae)
TIAM2 T-cell lymphoma invasion and metastasis 2
TMC8 transmembrane channel-like 8
TMEM251 transmembrane protein 251
TMEM63A transmembrane protein 63A
TMEM98 transmembrane protein 98
TNFRSF14 tumor necrosis factor receptor superfamily, member 14
TPT1 tumor protein, translationally-controlled 1
TPTE transmembrane phosphatase with tensin homology
TRIM33 tripartite motif containing 33
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae)
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TRPM6 transient receptor potential cation channel, subfamily M, member 6
TRUB1 TruB pseudouridine (psi) synthase family member 1
TSPAN14 tetraspanin 14
TSPAN7 tetraspanin 7
TTC12 tetratricopeptide repeat domain 12
TTC31 tetratricopeptide repeat domain 31
TTTY15 testis-specific transcript, Y-linked 15 (non-protein coding)
TUBGCP5 tubulin, gamma complex associated protein 5
TXLNGY taxilin gamma pseudogene, Y-linked
TXNRD3NB thioredoxin reductase 3 neighbor
TYRO3 TYRO3 protein tyrosine kinase
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
UQCRB ubiquinol-cytochrome c reductase binding protein
UQCRC2 ubiquinol-cytochrome c reductase core protein II
VCL vinculin
VN1R4 vomeronasal 1 receptor 4
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
WDR26 WD repeat domain 26
XPA xeroderma pigmentosum, complementation group A
YTHDC1 YTH domain containing 1
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
ZADH2 zinc binding alcohol dehydrogenase domain containing 2
ZC3H13 zinc finger CCCH-type containing 13
ZCCHC10 zinc finger, CCHC domain containing 10
ZCCHC9 zinc finger, CCHC domain containing 9
ZFAT-AS1 ZFAT antisense RNA 1
ZFP36 ZFP36 ring finger protein
ZFP62 ZFP62 zinc finger protein
ZNF330 zinc finger protein 330
ZNF331 zinc finger protein 331
ZNF449 zinc finger protein 449
ZNF572 zinc finger protein 572
ZNF589 zinc finger protein 589
ZNF608 zinc finger protein 608
ZNF618 zinc finger protein 618
ZNHIT6 zinc finger, HIT-type containing 6

low expression

Symbol Name
NUDT16 nudix (nucleoside diphosphate linked moiety X)-type motif 16
SKIV2L superkiller viralicidic activity 2-like (S. cerevisiae)
ZNF263 zinc finger protein 263
ZNF543 zinc finger protein 543