Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1YX-06A-11R-A18T-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

346 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-FS-A1YX-06A-11R-A18T-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASDH aminoadipate-semialdehyde dehydrogenase
AASS aminoadipate-semialdehyde synthase
ABCC4 ATP-binding cassette, sub-family C (CFTR/MRP), member 4
ABCC9 ATP-binding cassette, sub-family C (CFTR/MRP), member 9
ABHD3 abhydrolase domain containing 3
ADAMTS1 ADAM metallopeptidase with thrombospondin type 1 motif, 1
ADGRG1 adhesion G protein-coupled receptor G1
ADGRL3 adhesion G protein-coupled receptor L3
AHCYL2 adenosylhomocysteinase-like 2
AKAP9 A kinase (PRKA) anchor protein 9
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase
ALG6 ALG6, alpha-1,3-glucosyltransferase
AMN1 antagonist of mitotic exit network 1 homolog (S. cerevisiae)
ANKRD17 ankyrin repeat domain 17
ANKRD50 ankyrin repeat domain 50
ANO5 anoctamin 5
ANXA13 annexin A13
AP1G1 adaptor-related protein complex 1, gamma 1 subunit
AP1S2 adaptor-related protein complex 1, sigma 2 subunit
ARFIP1 ADP-ribosylation factor interacting protein 1
ARHGAP42 Rho GTPase activating protein 42
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1
ARRDC3 arrestin domain containing 3
ARSD arylsulfatase D
ARSJ arylsulfatase family, member J
ASB11 ankyrin repeat and SOCS box containing 11, E3 ubiquitin protein ligase
ATF7IP2 activating transcription factor 7 interacting protein 2
ATG4C autophagy related 4C, cysteine peptidase
ATMIN ATM interactor
ATP10B ATPase, class V, type 10B
ATP11C ATPase, class VI, type 11C
ATP2B1 ATPase, Ca++ transporting, plasma membrane 1
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
AVPR1A arginine vasopressin receptor 1A
BAG4 BCL2-associated athanogene 4
BCO2 beta-carotene oxygenase 2
BDNF brain-derived neurotrophic factor
BHLHE22 basic helix-loop-helix family, member e22
BICD1 bicaudal D homolog 1 (Drosophila)
C11ORF63 chromosome 11 open reading frame 63
C12ORF4 chromosome 12 open reading frame 4
C16ORF46 chromosome 16 open reading frame 46
C4ORF19 chromosome 4 open reading frame 19
C9ORF129 chromosome 9 open reading frame 129
C9ORF41 chromosome 9 open reading frame 41
C9ORF50 chromosome 9 open reading frame 50
CAMK2D calcium/calmodulin-dependent protein kinase II delta
CBLN2 cerebellin 2 precursor
CBWD5 COBW domain containing 5
CCL11 chemokine (C-C motif) ligand 11
CCL23 chemokine (C-C motif) ligand 23
CCSAP centriole, cilia and spindle-associated protein
CD36 CD36 molecule (thrombospondin receptor)
CDC14B cell division cycle 14B
CDC14C cell division cycle 14C
CDK12 cyclin-dependent kinase 12
CDK20 cyclin-dependent kinase 20
CERS6 ceramide synthase 6
CHL1 cell adhesion molecule L1-like
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
CLCN3 chloride channel, voltage-sensitive 3
CLOCK clock circadian regulator
COBLL1 cordon-bleu WH2 repeat protein-like 1
COX18 COX18 cytochrome c oxidase assembly factor
CRACR2A calcium release activated channel regulator 2A
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CTAGE4 CTAGE family, member 4
CTAGE6 CTAGE family, member 6
CTAGE9 CTAGE family, member 9
CTPS2 CTP synthase 2
CYP26C1 cytochrome P450, family 26, subfamily C, polypeptide 1
CYP4F29P cytochrome P450, family 4, subfamily F, polypeptide 29, pseudogene
CYP51A1 cytochrome P450, family 51, subfamily A, polypeptide 1
DCC DCC netrin 1 receptor
DCLK2 doublecortin-like kinase 2
DDX26B DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 26B
DEPTOR DEP domain containing MTOR-interacting protein
DGKI diacylglycerol kinase, iota
DIRC1 disrupted in renal carcinoma 1
DLC1 DLC1 Rho GTPase activating protein
DNAH7 dynein, axonemal, heavy chain 7
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DOCK7 dedicator of cytokinesis 7
DOLPP1 dolichyldiphosphatase 1
DPAGT1 dolichyl-phosphate (UDP-N-acetylglucosamine) N-acetylglucosaminephosphotransferase 1 (GlcNAc-1-P transferase)
DPY19L3 dpy-19-like 3 (C. elegans)
DTX4 deltex 4, E3 ubiquitin ligase
DYNC1I1 dynein, cytoplasmic 1, intermediate chain 1
EDDM3A epididymal protein 3A
EEF2K eukaryotic elongation factor 2 kinase
EFHC2 EF-hand domain (C-terminal) containing 2
ERC1 ELKS/RAB6-interacting/CAST family member 1
ERCC6L2 excision repair cross-complementation group 6-like 2
EYA1 EYA transcriptional coactivator and phosphatase 1
FAM120A family with sequence similarity 120A
FBXO47 F-box protein 47
FGD4 FYVE, RhoGEF and PH domain containing 4
FKTN fukutin
FOXD2 forkhead box D2
FOXO1 forkhead box O1
FRAS1 Fraser extracellular matrix complex subunit 1
G6PC2 glucose-6-phosphatase, catalytic, 2
GAPVD1 GTPase activating protein and VPS9 domains 1
GAREM GRB2 associated, regulator of MAPK1
GJA3 gap junction protein, alpha 3, 46kDa
GLE1 GLE1 RNA export mediator
GNAQ guanine nucleotide binding protein (G protein), q polypeptide
GNG7 guanine nucleotide binding protein (G protein), gamma 7
GOLGA1 golgin A1
GP6 glycoprotein VI (platelet)
GPM6B glycoprotein M6B
GPR107 G protein-coupled receptor 107
GPR180 G protein-coupled receptor 180
GPR21 G protein-coupled receptor 21
GPR89B G protein-coupled receptor 89B
GRIA4 glutamate receptor, ionotropic, AMPA 4
GRIK3 glutamate receptor, ionotropic, kainate 3
GSE1 Gse1 coiled-coil protein
GYPE glycophorin E (MNS blood group)
H1FOO H1 histone family, member O, oocyte-specific
HADH hydroxyacyl-CoA dehydrogenase
HCRTR1 hypocretin (orexin) receptor 1
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HIPK3 homeodomain interacting protein kinase 3
HIVEP3 human immunodeficiency virus type I enhancer binding protein 3
HKDC1 hexokinase domain containing 1
HMBOX1 homeobox containing 1
HPN hepsin
HPSE2 heparanase 2 (inactive)
HSD17B12 hydroxysteroid (17-beta) dehydrogenase 12
HSDL2 hydroxysteroid dehydrogenase like 2
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IFT88 intraflagellar transport 88
IL13 interleukin 13
IL13RA1 interleukin 13 receptor, alpha 1
IL33 interleukin 33
IL5 interleukin 5
INTS9 integrator complex subunit 9
INTU inturned planar cell polarity protein
IPO8 importin 8
IPP intracisternal A particle-promoted polypeptide
KCTD1 potassium channel tetramerization domain containing 1
KCTD15 potassium channel tetramerization domain containing 15
KDR kinase insert domain receptor
KIAA0100 KIAA0100
KIAA1468 KIAA1468
KIAA1551 KIAA1551
KIAA1715 KIAA1715
KIF13A kinesin family member 13A
KIF13B kinesin family member 13B
KLHL13 kelch-like family member 13
KLHL42 kelch-like family member 42
KLHL8 kelch-like family member 8
KRTAP27-1 keratin associated protein 27-1
LAPTM4B lysosomal protein transmembrane 4 beta
LDLRAD3 low density lipoprotein receptor class A domain containing 3
LEPROT leptin receptor overlapping transcript
LHX2 LIM homeobox 2
LINC00051 long intergenic non-protein coding RNA 51
LINC00092 long intergenic non-protein coding RNA 92
LINC00094 long intergenic non-protein coding RNA 94
LINGO2 leucine rich repeat and Ig domain containing 2
LMF1 lipase maturation factor 1
LMO1 LIM domain only 1 (rhombotin 1)
LOC100240734 uncharacterized LOC100240734
LOC100240735 uncharacterized LOC100240735
LOC202181 SUMO-interacting motifs containing 1 pseudogene
LOC401463 uncharacterized LOC401463
LOC653653 adaptor-related protein complex 1, sigma 2 subunit pseudogene
LRRC8A leucine rich repeat containing 8 family, member A
MAP9 microtubule-associated protein 9
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MARC2 mitochondrial amidoxime reducing component 2
MBD3L1 methyl-CpG binding domain protein 3-like 1
MBNL3 muscleblind-like splicing regulator 3
MED29 mediator complex subunit 29
MEGF10 multiple EGF-like-domains 10
MFAP3L microfibrillar-associated protein 3-like
MFRP membrane frizzled-related protein
MFSD2A major facilitator superfamily domain containing 2A
MID1 midline 1
MON1B MON1 secretory trafficking family member B
MS4A13 membrane-spanning 4-domains, subfamily A, member 13
MS4A5 membrane-spanning 4-domains, subfamily A, member 5
MYO5B myosin VB
NAV1 neuron navigator 1
NBL1 neuroblastoma 1, DAN family BMP antagonist
NBPF1 neuroblastoma breakpoint family, member 1
NBR1 neighbor of BRCA1 gene 1
NCR3LG1 natural killer cell cytotoxicity receptor 3 ligand 1
NEGR1 neuronal growth regulator 1
NEK6 NIMA-related kinase 6
NEUROG1 neurogenin 1
NFIA nuclear factor I/A
NPEPPS aminopeptidase puromycin sensitive
NPY6R neuropeptide Y receptor Y6 (pseudogene)
NRCAM neuronal cell adhesion molecule
NTAN1 N-terminal asparagine amidase
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR1A2 olfactory receptor, family 1, subfamily A, member 2
OR2A1 olfactory receptor, family 2, subfamily A, member 1
OR2A4 olfactory receptor, family 2, subfamily A, member 4
OR2A7 olfactory receptor, family 2, subfamily A, member 7
OR2A9P olfactory receptor, family 2, subfamily A, member 9 pseudogene
OR2S2 olfactory receptor, family 2, subfamily S, member 2 (gene/pseudogene)
OR2T8 olfactory receptor, family 2, subfamily T, member 8
OR2W3 olfactory receptor, family 2, subfamily W, member 3
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OSBP oxysterol binding protein
OSBPL9 oxysterol binding protein-like 9
OXCT1 3-oxoacid CoA transferase 1
PANX1 pannexin 1
PCDH7 protocadherin 7
PCDHGA5 protocadherin gamma subfamily A, 5
PDDC1 Parkinson disease 7 domain containing 1
PDE3B phosphodiesterase 3B, cGMP-inhibited
PDE5A phosphodiesterase 5A, cGMP-specific
PDK3 pyruvate dehydrogenase kinase, isozyme 3
PGM2 phosphoglucomutase 2
PHF2 PHD finger protein 2
PIGN phosphatidylinositol glycan anchor biosynthesis, class N
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
PLS3 plastin 3
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
POMT1 protein-O-mannosyltransferase 1
POSTN periostin, osteoblast specific factor
POU3F3 POU class 3 homeobox 3
PPA2 pyrophosphatase (inorganic) 2
PPAPDC3 phosphatidic acid phosphatase type 2 domain containing 3
PPM1K protein phosphatase, Mg2+/Mn2+ dependent, 1K
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PRKCA protein kinase C, alpha
PRKX protein kinase, X-linked
PROX1 prospero homeobox 1
PRR16 proline rich 16
PRSS48 protease, serine, 48
PSD3 pleckstrin and Sec7 domain containing 3
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5
PTCH1 patched 1
PTGR1 prostaglandin reductase 1
PTN pleiotrophin
PTPRM protein tyrosine phosphatase, receptor type, M
RAB14 RAB14, member RAS oncogene family
RABGAP1 RAB GTPase activating protein 1
RAI14 retinoic acid induced 14
RASSF9 Ras association (RalGDS/AF-6) domain family (N-terminal) member 9
RBM11 RNA binding motif protein 11
RBM18 RNA binding motif protein 18
RC3H2 ring finger and CCCH-type domains 2
RELL1 RELT-like 1
RGS4 regulator of G-protein signaling 4
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
ROM1 retinal outer segment membrane protein 1
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RRH retinal pigment epithelium-derived rhodopsin homolog
RSPRY1 ring finger and SPRY domain containing 1
SALL1 spalt-like transcription factor 1
SAP18 Sin3A-associated protein, 18kDa
SBF2 SET binding factor 2
SCD5 stearoyl-CoA desaturase 5
SCFD2 sec1 family domain containing 2
SCLT1 sodium channel and clathrin linker 1
SCN3A sodium channel, voltage gated, type III alpha subunit
SCP2 sterol carrier protein 2
SEC16B SEC16 homolog B (S. cerevisiae)
SEC24B SEC24 family member B
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SGMS2 sphingomyelin synthase 2
SH3KBP1 SH3-domain kinase binding protein 1
SH3RF1 SH3 domain containing ring finger 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SIAE sialic acid acetylesterase
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
SLC18B1 solute carrier family 18, subfamily B, member 1
SLC25A40 solute carrier family 25, member 40
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC27A1 solute carrier family 27 (fatty acid transporter), member 1
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10
SLC2A9 solute carrier family 2 (facilitated glucose transporter), member 9
SLC9A3 solute carrier family 9, subfamily A (NHE3, cation proton antiporter 3), member 3
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SMC1A structural maintenance of chromosomes 1A
SMC5 structural maintenance of chromosomes 5
SNX19 sorting nexin 19
SORCS3 sortilin-related VPS10 domain containing receptor 3
SPHKAP SPHK1 interactor, AKAP domain containing
SPIRE1 spire-type actin nucleation factor 1
SPOCD1 SPOC domain containing 1
SPP1 secreted phosphoprotein 1
SPTLC1 serine palmitoyltransferase, long chain base subunit 1
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STOM stomatin
STX12 syntaxin 12
STX17 syntaxin 17
TAAR1 trace amine associated receptor 1
TAAR6 trace amine associated receptor 6
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TARM1 T cell-interacting, activating receptor on myeloid cells 1
TGDS TDP-glucose 4,6-dehydratase
TGFBR3 transforming growth factor, beta receptor III
TIGD4 tigger transposable element derived 4
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TMEM133 transmembrane protein 133
TMEM192 transmembrane protein 192
TMEM231 transmembrane protein 231
TMEM80 transmembrane protein 80
TMX4 thioredoxin-related transmembrane protein 4
TRIM58 tripartite motif containing 58
TSC1 tuberous sclerosis 1
TSTD2 thiosulfate sulfurtransferase (rhodanese)-like domain containing 2
TTLL11 tubulin tyrosine ligase-like family member 11
TTLL6 tubulin tyrosine ligase-like family member 6
TUSC3 tumor suppressor candidate 3
UBA6 ubiquitin-like modifier activating enzyme 6
UBE2D4 ubiquitin-conjugating enzyme E2D 4 (putative)
UBE4A ubiquitination factor E4A
UEVLD UEV and lactate/malate dehyrogenase domains
UGCG UDP-glucose ceramide glucosyltransferase
UGT8 UDP glycosyltransferase 8
UPRT uracil phosphoribosyltransferase (FUR1) homolog (S. cerevisiae)
URI1 URI1, prefoldin-like chaperone
USP38 ubiquitin specific peptidase 38
VMP1 vacuole membrane protein 1
VPS13A vacuolar protein sorting 13 homolog A (S. cerevisiae)
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
VSTM2L V-set and transmembrane domain containing 2 like
WDFY3 WD repeat and FYVE domain containing 3
XPO7 exportin 7
ZDHHC13 zinc finger, DHHC-type containing 13
ZDHHC20 zinc finger, DHHC-type containing 20
ZFHX3 zinc finger homeobox 3
ZHX1 zinc fingers and homeoboxes 1
ZMPSTE24 zinc metallopeptidase STE24
ZNF234 zinc finger protein 234
ZNF462 zinc finger protein 462
ZNF77 zinc finger protein 77
ZNF790 zinc finger protein 790
ZYG11B zyg-11 family member B, cell cycle regulator

low expression

Symbol Name
TRIP4 thyroid hormone receptor interactor 4