Skin Cutaneous Melanoma_SKCM_TCGA-FR-A3R1-01A-11R-A239-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

388 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-FR-A3R1-01A-11R-A239-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACADSB acyl-CoA dehydrogenase, short/branched chain
ACP6 acid phosphatase 6, lysophosphatidic
ACVR1 activin A receptor, type I
ADD3 adducin 3 (gamma)
ADPRH ADP-ribosylarginine hydrolase
AFAP1L2 actin filament associated protein 1-like 2
AKAP3 A kinase (PRKA) anchor protein 3
AKAP7 A kinase (PRKA) anchor protein 7
ALKBH3 alkB, alkylation repair homolog 3 (E. coli)
AMD1 adenosylmethionine decarboxylase 1
ANKIB1 ankyrin repeat and IBR domain containing 1
ANKMY2 ankyrin repeat and MYND domain containing 2
ANKRD26 ankyrin repeat domain 26
ANKRD28 ankyrin repeat domain 28
ANKRD7 ankyrin repeat domain 7
ANO6 anoctamin 6
ANTXRL anthrax toxin receptor-like
ANXA3 annexin A3
ANXA4 annexin A4
API5 apoptosis inhibitor 5
AR androgen receptor
ARHGAP18 Rho GTPase activating protein 18
ARHGAP19 Rho GTPase activating protein 19
ARHGAP21 Rho GTPase activating protein 21
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9
ARX aristaless related homeobox
ASPA aspartoacylase
ATXN7L1 ataxin 7-like 1
BATF2 basic leucine zipper transcription factor, ATF-like 2
BBS9 Bardet-Biedl syndrome 9
BEND7 BEN domain containing 7
BST2 bone marrow stromal cell antigen 2
BUB3 BUB3 mitotic checkpoint protein
C10ORF76 chromosome 10 open reading frame 76
C10ORF90 chromosome 10 open reading frame 90
C11ORF74 chromosome 11 open reading frame 74
C18ORF25 chromosome 18 open reading frame 25
C2ORF15 chromosome 2 open reading frame 15
C5 complement component 5
C7ORF13 chromosome 7 open reading frame 13
C7ORF25 chromosome 7 open reading frame 25
CADPS Ca++-dependent secretion activator
CADPS2 Ca++-dependent secretion activator 2
CAPRIN1 cell cycle associated protein 1
CASD1 CAS1 domain containing 1
CAT catalase
CBLN4 cerebellin 4 precursor
CBX3 chromobox homolog 3
CCBL2 cysteine conjugate-beta lyase 2
CCDC122 coiled-coil domain containing 122
CCL18 chemokine (C-C motif) ligand 18 (pulmonary and activation-regulated)
CCNC cyclin C
CCNJL cyclin J-like
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CDCA7L cell division cycle associated 7-like
CDK19 cyclin-dependent kinase 19
CENPBD1 CENPB DNA-binding domains containing 1
CENPU centromere protein U
CFAP70 cilia and flagella associated protein 70
CFL2 cofilin 2 (muscle)
CHUK conserved helix-loop-helix ubiquitous kinase
COPB1 coatomer protein complex, subunit beta 1
CPEB3 cytoplasmic polyadenylation element binding protein 3
CX3CL1 chemokine (C-X3-C motif) ligand 1
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DAAM2 dishevelled associated activator of morphogenesis 2
DACT1 dishevelled-binding antagonist of beta-catenin 1
DAPL1 death associated protein-like 1
DBR1 debranching RNA lariats 1
DCLRE1A DNA cross-link repair 1A
DCLRE1C DNA cross-link repair 1C
DDX58 DEAD (Asp-Glu-Ala-Asp) box polypeptide 58
DDX60 DEAD (Asp-Glu-Ala-Asp) box polypeptide 60
DEAF1 DEAF1 transcription factor
DENND4C DENN/MADD domain containing 4C
DENND5A DENN/MADD domain containing 5A
DEPDC7 DEP domain containing 7
DHX32 DEAH (Asp-Glu-Ala-His) box polypeptide 32
DKFZP586I1420 uncharacterized protein DKFZp586I1420
DOPEY2 dopey family member 2
DPY19L1 dpy-19-like 1 (C. elegans)
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene
DTX3L deltex 3 like, E3 ubiquitin ligase
EFNB3 ephrin-B3
EHBP1 EH domain binding protein 1
ELAC1 elaC ribonuclease Z 1
ELP4 elongator acetyltransferase complex subunit 4
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7
ERAP1 endoplasmic reticulum aminopeptidase 1
ERLIN1 ER lipid raft associated 1
ESYT2 extended synaptotagmin-like protein 2
EXOC6 exocyst complex component 6
EXT2 exostosin glycosyltransferase 2
FADS3 fatty acid desaturase 3
FAM111B family with sequence similarity 111, member B
FAM126A family with sequence similarity 126, member A
FAM204A family with sequence similarity 204, member A
FAM35A family with sequence similarity 35, member A
FAM35BP family with sequence similarity 35, member A pseudogene
FAM35DP family with sequence similarity 35, member A pseudogene
FAM3C family with sequence similarity 3, member C
FAR1 fatty acyl CoA reductase 1
FBXO15 F-box protein 15
FBXO3 F-box protein 3
FEM1C fem-1 homolog c (C. elegans)
FNBP1L formin binding protein 1-like
FOXL2NB FOXL2 neighbor
FOXN2 forkhead box N2
FRMD5 FERM domain containing 5
FZD6 frizzled class receptor 6
GAGE8 G antigen 8
GBP2 guanylate binding protein 2, interferon-inducible
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GRAMD3 GRAM domain containing 3
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
HACD2 3-hydroxyacyl-CoA dehydratase 2
HACL1 2-hydroxyacyl-CoA lyase 1
HARBI1 harbinger transposase derived 1
HCG4 HLA complex group 4 (non-protein coding)
HERPUD2 HERPUD family member 2
HEXB hexosaminidase B (beta polypeptide)
HIST1H2AG histone cluster 1, H2ag
HIST1H2BD histone cluster 1, H2bd
HIST3H3 histone cluster 3, H3
HLA-DOA major histocompatibility complex, class II, DO alpha
HLA-E major histocompatibility complex, class I, E
HLA-F major histocompatibility complex, class I, F
HLA-J major histocompatibility complex, class I, J (pseudogene)
HPSE heparanase
IFIH1 interferon induced with helicase C domain 1
IFIT2 interferon-induced protein with tetratricopeptide repeats 2
IFIT3 interferon-induced protein with tetratricopeptide repeats 3
IFIT5 interferon-induced protein with tetratricopeptide repeats 5
IFNA10 interferon, alpha 10
IL12RB2 interleukin 12 receptor, beta 2
IMMP1L IMP1 inner mitochondrial membrane peptidase-like (S. cerevisiae)
INA internexin neuronal intermediate filament protein, alpha
INTS12 integrator complex subunit 12
IQCH IQ motif containing H
ITPR3 inositol 1,4,5-trisphosphate receptor, type 3
JKAMP JNK1/MAPK8-associated membrane protein
JMJD1C jumonji domain containing 1C
KAT2B K(lysine) acetyltransferase 2B
KBTBD2 kelch repeat and BTB (POZ) domain containing 2
KBTBD4 kelch repeat and BTB (POZ) domain containing 4
KCNJ11 potassium channel, inwardly rectifying subfamily J, member 11
KCNMA1 potassium channel, calcium activated large conductance subfamily M alpha, member 1
KDM4C lysine (K)-specific demethylase 4C
KIAA1045 KIAA1045
KIAA1755 KIAA1755
KIAA1841 KIAA1841
KLF14 Kruppel-like factor 14
KLHL4 kelch-like family member 4
KLHL7 kelch-like family member 7
KMT2E lysine (K)-specific methyltransferase 2E
KRCC1 lysine-rich coiled-coil 1
LAMA1 laminin, alpha 1
LARGE like-glycosyltransferase
LGALS3 lectin, galactoside-binding, soluble, 3
LHFPL1 lipoma HMGIC fusion partner-like 1
LIMA1 LIM domain and actin binding 1
LINC00158 long intergenic non-protein coding RNA 158
LNX2 ligand of numb-protein X 2
LOC146481
LOC643486
LPAR3 lysophosphatidic acid receptor 3
LPCAT2 lysophosphatidylcholine acyltransferase 2
LRP11 low density lipoprotein receptor-related protein 11
LRRC16A leucine rich repeat containing 16A
LRRC75A leucine rich repeat containing 75A
LYPD1 LY6/PLAUR domain containing 1
MAPKBP1 mitogen-activated protein kinase binding protein 1
MARCH5 membrane-associated ring finger (C3HC4) 5
MCOLN2 mucolipin 2
MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1
METTL15 methyltransferase like 15
MFAP3L microfibrillar-associated protein 3-like
MFSD6 major facilitator superfamily domain containing 6
MICU1 mitochondrial calcium uptake 1
MID2 midline 2
MINA MYC induced nuclear antigen
MORC3 MORC family CW-type zinc finger 3
MPZ myelin protein zero
MTCH2 mitochondrial carrier 2
MXI1 MAX interactor 1, dimerization protein
MYRIP myosin VIIA and Rab interacting protein
NBPF4 neuroblastoma breakpoint family, member 4
NBPF6 neuroblastoma breakpoint family, member 6
NINJ2 ninjurin 2
NIPAL3 NIPA-like domain containing 3
NLGN1 neuroligin 1
NOV nephroblastoma overexpressed
NR2E1 nuclear receptor subfamily 2, group E, member 1
NRCAM neuronal cell adhesion molecule
NUP98 nucleoporin 98kDa
NUPL2 nucleoporin like 2
OAS1 2'-5'-oligoadenylate synthetase 1, 40/46kDa
OAS2 2'-5'-oligoadenylate synthetase 2, 69/71kDa
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR2AE1 olfactory receptor, family 2, subfamily AE, member 1
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2M4 olfactory receptor, family 2, subfamily M, member 4
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR52K1 olfactory receptor, family 52, subfamily K, member 1
OR5AN1 olfactory receptor, family 5, subfamily AN, member 1
OSBPL3 oxysterol binding protein-like 3
OTUD4 OTU deubiquitinase 4
OVCH1 ovochymase 1
PARD3 par-3 family cell polarity regulator
PARP9 poly (ADP-ribose) polymerase family, member 9
PASD1 PAS domain containing 1
PCDHGA10 protocadherin gamma subfamily A, 10
PCGF6 polycomb group ring finger 6
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PDE4B phosphodiesterase 4B, cAMP-specific
PGBD1 piggyBac transposable element derived 1
PGBD3 piggyBac transposable element derived 3
PGM5 phosphoglucomutase 5
PGM5P2 phosphoglucomutase 5 pseudogene 2
PI4K2A phosphatidylinositol 4-kinase type 2 alpha
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
PLEKHG1 pleckstrin homology domain containing, family G (with RhoGef domain) member 1
PLEKHS1 pleckstrin homology domain containing, family S member 1
PLK2 polo-like kinase 2
PLLP plasmolipin
PLS3 plastin 3
PLSCR1 phospholipid scramblase 1
PMS2P2 postmeiotic segregation increased 2 pseudogene 2
PNPLA8 patatin-like phospholipase domain containing 8
POLR2J2 polymerase (RNA) II (DNA directed) polypeptide J2
POPDC3 popeye domain containing 3
PPA2 pyrophosphatase (inorganic) 2
PPFIBP1 PTPRF interacting protein, binding protein 1 (liprin beta 1)
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPIL6 peptidylprolyl isomerase (cyclophilin)-like 6
PPP1R21 protein phosphatase 1, regulatory subunit 21
PPP1R2P3 protein phosphatase 1, regulatory (inhibitor) subunit 2 pseudogene 3
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PPP3CB protein phosphatase 3, catalytic subunit, beta isozyme
PRDM14 PR domain containing 14
PRDM7 PR domain containing 7
PREP prolyl endopeptidase
PRKCI protein kinase C, iota
PRKD1 protein kinase D1
PRY2 PTPN13-like, Y-linked 2
PSMB9 proteasome (prosome, macropain) subunit, beta type, 9
PTPMT1 protein tyrosine phosphatase, mitochondrial 1
PTPN20 protein tyrosine phosphatase, non-receptor type 20
PTPN21 protein tyrosine phosphatase, non-receptor type 21
RAB12 RAB12, member RAS oncogene family
RAB3B RAB3B, member RAS oncogene family
RAB40B RAB40B, member RAS oncogene family
RAB5A RAB5A, member RAS oncogene family
RAB8B RAB8B, member RAS oncogene family
RAD9B RAD9 homolog B (S. pombe)
RALA v-ral simian leukemia viral oncogene homolog A (ras related)
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RANBP17 RAN binding protein 17
RBMXL1 RNA binding motif protein, X-linked-like 1
RDH5 retinol dehydrogenase 5 (11-cis/9-cis)
RECK reversion-inducing-cysteine-rich protein with kazal motifs
REEP3 receptor accessory protein 3
RELL1 RELT-like 1
RFK riboflavin kinase
RNASE11 ribonuclease, RNase A family, 11 (non-active)
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RNF32 ring finger protein 32
RP2 retinitis pigmentosa 2 (X-linked recessive)
RPAP3 RNA polymerase II associated protein 3
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RRM1 ribonucleotide reductase M1
RTP4 receptor (chemosensory) transporter protein 4
RWDD1 RWD domain containing 1
SAMD9L sterile alpha motif domain containing 9-like
SAP30 Sin3A-associated protein, 30kDa
SBDS Shwachman-Bodian-Diamond syndrome
SBF2 SET binding factor 2
SCARB2 scavenger receptor class B, member 2
SEPT10 septin 10
SEPT7 septin 7
SERAC1 serine active site containing 1
SGCB sarcoglycan, beta (43kDa dystrophin-associated glycoprotein)
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SH3TC2 SH3 domain and tetratricopeptide repeats 2
SHC4 SHC (Src homology 2 domain containing) family, member 4
SHROOM2 shroom family member 2
SLC25A16 solute carrier family 25 (mitochondrial carrier), member 16
SLC29A1 solute carrier family 29 (equilibrative nucleoside transporter), member 1
SLC35B3 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B3
SLC35D2 solute carrier family 35 (UDP-GlcNAc/UDP-glucose transporter), member D2
SLC35G1 solute carrier family 35, member G1
SLC37A3 solute carrier family 37, member 3
SLC44A1 solute carrier family 44 (choline transporter), member 1
SLK STE20-like kinase
SNX10 sorting nexin 10
SNX14 sorting nexin 14
SNX6 sorting nexin 6
SNX9 sorting nexin 9
SOX2 SRY (sex determining region Y)-box 2
SP100 SP100 nuclear antigen
SP110 SP110 nuclear body protein
SP8 Sp8 transcription factor
SPATA13 spermatogenesis associated 13
SPATS2 spermatogenesis associated, serine-rich 2
SPATS2L spermatogenesis associated, serine-rich 2-like
SRPK2 SRSF protein kinase 2
SSBP2 single-stranded DNA binding protein 2
ST3GAL5 ST3 beta-galactoside alpha-2,3-sialyltransferase 5
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
STAG3 stromal antigen 3
STAT1 signal transducer and activator of transcription 1, 91kDa
STAT2 signal transducer and activator of transcription 2, 113kDa
STMN1 stathmin 1
STOML3 stomatin (EPB72)-like 3
SULT6B1 sulfotransferase family, cytosolic, 6B, member 1
SVIP small VCP/p97-interacting protein
SYCE2 synaptonemal complex central element protein 2
SYNE2 spectrin repeat containing, nuclear envelope 2
SYT14 synaptotagmin XIV
TBX18 T-box 18
TCEAL1 transcription elongation factor A (SII)-like 1
TCTN2 tectonic family member 2
TDRD7 tudor domain containing 7
TGS1 trimethylguanosine synthase 1
TIGD4 tigger transposable element derived 4
TJP1 tight junction protein 1
TM7SF3 transmembrane 7 superfamily member 3
TMED8 transmembrane emp24 protein transport domain containing 8
TMEM132A transmembrane protein 132A
TMEM171 transmembrane protein 171
TMEM217 transmembrane protein 217
TMEM242 transmembrane protein 242
TMEM43 transmembrane protein 43
TMEM50B transmembrane protein 50B
TMEM68 transmembrane protein 68
TMEM9B TMEM9 domain family, member B
TMOD1 tropomodulin 1
TMTC1 transmembrane and tetratricopeptide repeat containing 1
TNFSF4 tumor necrosis factor (ligand) superfamily, member 4
TNKS2 tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase 2
TPGS2 tubulin polyglutamylase complex subunit 2
TRIM2 tripartite motif containing 2
TRIM21 tripartite motif containing 21
TRIM22 tripartite motif containing 22
TRIM34 tripartite motif containing 34
TRIM38 tripartite motif containing 38
TRIM5 tripartite motif containing 5
TRIM66 tripartite motif containing 66
TRIM68 tripartite motif containing 68
TSPAN33 tetraspanin 33
UBXN2A UBX domain protein 2A
UHRF2 ubiquitin-like with PHD and ring finger domains 2, E3 ubiquitin protein ligase
USP12 ubiquitin specific peptidase 12
USP18 ubiquitin specific peptidase 18
USP47 ubiquitin specific peptidase 47
USP54 ubiquitin specific peptidase 54
USP6NL USP6 N-terminal like
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
WBP2NL WBP2 N-terminal like
XAF1 XIAP associated factor 1
XPNPEP1 X-prolyl aminopeptidase (aminopeptidase P) 1, soluble
YAE1D1 Yae1 domain containing 1
ZBED5 zinc finger, BED-type containing 5
ZCWPW1 zinc finger, CW type with PWWP domain 1
ZDHHC13 zinc finger, DHHC-type containing 13
ZDHHC14 zinc finger, DHHC-type containing 14
ZFP37 ZFP37 zinc finger protein
ZMYND11 zinc finger, MYND-type containing 11
ZMYND15 zinc finger, MYND-type containing 15
ZNF257 zinc finger protein 257
ZNF277 zinc finger protein 277
ZNF367 zinc finger protein 367
ZNF432 zinc finger protein 432
ZNF439 zinc finger protein 439
ZNF484 zinc finger protein 484
ZNF492 zinc finger protein 492
ZNF658 zinc finger protein 658
ZNF667 zinc finger protein 667
ZNF781 zinc finger protein 781
ZNF841 zinc finger protein 841
ZNF883 zinc finger protein 883
ZNRF2 zinc and ring finger 2, E3 ubiquitin protein ligase

low expression

Symbol Name
CTBP1 C-terminal binding protein 1