Skin Cutaneous Melanoma_SKCM_TCGA-ER-A199-06A-11R-A18T-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

260 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-ER-A199-06A-11R-A18T-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10
ABCG5 ATP-binding cassette, sub-family G (WHITE), member 5
ABT1 activator of basal transcription 1
ADGRL2 adhesion G protein-coupled receptor L2
AKT1S1 AKT1 substrate 1 (proline-rich)
ALDH4A1 aldehyde dehydrogenase 4 family, member A1
ALPL alkaline phosphatase, liver/bone/kidney
ANKRD20A11P ankyrin repeat domain 20 family, member A11, pseudogene
ARFIP1 ADP-ribosylation factor interacting protein 1
ARGFX arginine-fifty homeobox
ASAP1-IT1 ASAP1 intronic transcript 1
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BMPR1A bone morphogenetic protein receptor, type IA
BZW2 basic leucine zipper and W2 domains 2
C10ORF120 chromosome 10 open reading frame 120
C2CD5 C2 calcium-dependent domain containing 5
C6 complement component 6
C6ORF58 chromosome 6 open reading frame 58
CA11 carbonic anhydrase XI
CABP5 calcium binding protein 5
CADPS Ca++-dependent secretion activator
CCDC105 coiled-coil domain containing 105
CCDC115 coiled-coil domain containing 115
CCDC142 coiled-coil domain containing 142
CCDC42 coiled-coil domain containing 42
CCDC83 coiled-coil domain containing 83
CCL24 chemokine (C-C motif) ligand 24
CCNJL cyclin J-like
CD1D CD1d molecule
CD5L CD5 molecule-like
CDKN2A-AS1 CDKN2A antisense RNA 1 (head to head)
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CDYL2 chromodomain protein, Y-like 2
CEACAM21 carcinoembryonic antigen-related cell adhesion molecule 21
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CERKL ceramide kinase-like
CFAP126 cilia and flagella associated protein 126
CLC Charcot-Leyden crystal galectin
CLN5 ceroid-lipofuscinosis, neuronal 5
CLSTN3 calsyntenin 3
CNGA1 cyclic nucleotide gated channel alpha 1
CNTN4 contactin 4
COTL1 coactosin-like F-actin binding protein 1
CR1 complement component (3b/4b) receptor 1 (Knops blood group)
CRX cone-rod homeobox
CTBP2 C-terminal binding protein 2
CXXC4 CXXC finger protein 4
CYP4F29P cytochrome P450, family 4, subfamily F, polypeptide 29, pseudogene
DEFB135 defensin, beta 135
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DIO3 deiodinase, iodothyronine, type III
DLEU1 deleted in lymphocytic leukemia 1 (non-protein coding)
DNAAF3 dynein, axonemal, assembly factor 3
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNASE1 deoxyribonuclease I
DRP2 dystrophin related protein 2
E2F8 E2F transcription factor 8
EEF1A1 eukaryotic translation elongation factor 1 alpha 1
EEF1A1P9 eukaryotic translation elongation factor 1 alpha 1 pseudogene 9
EFEMP1 EGF containing fibulin-like extracellular matrix protein 1
ENOX1 ecto-NOX disulfide-thiol exchanger 1
EPB41L2 erythrocyte membrane protein band 4.1-like 2
ETV2 ets variant 2
EXOC6 exocyst complex component 6
F11R F11 receptor
FABP7 fatty acid binding protein 7, brain
FAM103A1 family with sequence similarity 103, member A1
FAM117A family with sequence similarity 117, member A
FAM170A family with sequence similarity 170, member A
FAM27C family with sequence similarity 27, member C
FAM78B family with sequence similarity 78, member B
FAT4 FAT atypical cadherin 4
FATE1 fetal and adult testis expressed 1
FBL fibrillarin
FBXL14 F-box and leucine-rich repeat protein 14
FRMD8 FERM domain containing 8
FUCA1 fucosidase, alpha-L- 1, tissue
FYN FYN proto-oncogene, Src family tyrosine kinase
GATM glycine amidinotransferase (L-arginine:glycine amidinotransferase)
GCA grancalcin, EF-hand calcium binding protein
GFI1 growth factor independent 1 transcription repressor
GJA10 gap junction protein, alpha 10, 62kDa
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GNG7 guanine nucleotide binding protein (G protein), gamma 7
GNG8 guanine nucleotide binding protein (G protein), gamma 8
GPR101 G protein-coupled receptor 101
GPR32 G protein-coupled receptor 32
GPR6 G protein-coupled receptor 6
GPR88 G protein-coupled receptor 88
GRAPL GRB2-related adaptor protein-like
GRIK1-AS1 GRIK1 antisense RNA 1
GTPBP2 GTP binding protein 2
HACL1 2-hydroxyacyl-CoA lyase 1
HIST1H1D histone cluster 1, H1d
HIST1H1E histone cluster 1, H1e
HIST1H2BI histone cluster 1, H2bi
HIST1H3B histone cluster 1, H3b
HIST2H2AB histone cluster 2, H2ab
HMHB1 histocompatibility (minor) HB-1
HOXA1 homeobox A1
HOXA4 homeobox A4
HYAL2 hyaluronoglucosaminidase 2
ICAM1 intercellular adhesion molecule 1
IL27RA interleukin 27 receptor, alpha
IL6 interleukin 6
INMT indolethylamine N-methyltransferase
ITGA4 integrin, alpha 4 (antigen CD49D, alpha 4 subunit of VLA-4 receptor)
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCTD20 potassium channel tetramerization domain containing 20
KEAP1 kelch-like ECH-associated protein 1
KLHL36 kelch-like family member 36
KLRF1 killer cell lectin-like receptor subfamily F, member 1
LBH limb bud and heart development
LEF1 lymphoid enhancer-binding factor 1
LILRA1 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 1
LILRA5 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 5
LIN28A lin-28 homolog A (C. elegans)
LINGO2 leucine rich repeat and Ig domain containing 2
LIPA lipase A, lysosomal acid, cholesterol esterase
LMO3 LIM domain only 3 (rhombotin-like 2)
LOC113230 uncharacterized protein LOC113230
LOC283332 uncharacterized LOC283332
LOC646813 DEAH (Asp-Glu-Ala-His) box helicase 9 pseudogene
LRFN5 leucine rich repeat and fibronectin type III domain containing 5
LRRC10 leucine rich repeat containing 10
LSAMP limbic system-associated membrane protein
LYPD4 LY6/PLAUR domain containing 4
MAD2L1BP MAD2L1 binding protein
MARCH2 membrane-associated ring finger (C3HC4) 2, E3 ubiquitin protein ligase
MARCKSL1 MARCKS-like 1
MBOAT1 membrane bound O-acyltransferase domain containing 1
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MED28 mediator complex subunit 28
METAP1D methionyl aminopeptidase type 1D (mitochondrial)
MGC45800
MLLT3 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 3
MPZ myelin protein zero
MUC7 mucin 7, secreted
MYADML myeloid-associated differentiation marker-like (pseudogene)
NAGPA N-acetylglucosamine-1-phosphodiester alpha-N-acetylglucosaminidase
NANOS2 nanos homolog 2 (Drosophila)
NAT14 N-acetyltransferase 14 (GCN5-related, putative)
NCK2 NCK adaptor protein 2
NFE2L2 nuclear factor, erythroid 2-like 2
NFKBIE nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, epsilon
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
OLIG1 oligodendrocyte transcription factor 1
OR10R2 olfactory receptor, family 10, subfamily R, member 2
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1F2P olfactory receptor, family 1, subfamily F, member 2, pseudogene
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR1L6 olfactory receptor, family 1, subfamily L, member 6
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR2G2 olfactory receptor, family 2, subfamily G, member 2
OR2T12 olfactory receptor, family 2, subfamily T, member 12
OR2T35 olfactory receptor, family 2, subfamily T, member 35
OR4D5 olfactory receptor, family 4, subfamily D, member 5
OR4K14 olfactory receptor, family 4, subfamily K, member 14
OR4M1 olfactory receptor, family 4, subfamily M, member 1
OR4X1 olfactory receptor, family 4, subfamily X, member 1 (gene/pseudogene)
OR51A7 olfactory receptor, family 51, subfamily A, member 7
OR51Q1 olfactory receptor, family 51, subfamily Q, member 1 (gene/pseudogene)
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR52R1 olfactory receptor, family 52, subfamily R, member 1 (gene/pseudogene)
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR5C1 olfactory receptor, family 5, subfamily C, member 1
OR8B2 olfactory receptor, family 8, subfamily B, member 2
OR9A2 olfactory receptor, family 9, subfamily A, member 2
PARD6A par-6 family cell polarity regulator alpha
PAX5 paired box 5
PBX2 pre-B-cell leukemia homeobox 2
PCGF2 polycomb group ring finger 2
PCP2 Purkinje cell protein 2
PEG10 paternally expressed 10
PHACTR2 phosphatase and actin regulator 2
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PKP4 plakophilin 4
PLA2G7 phospholipase A2, group VII (platelet-activating factor acetylhydrolase, plasma)
PLAC8 placenta-specific 8
PPM1N protein phosphatase, Mg2+/Mn2+ dependent, 1N (putative)
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP4C protein phosphatase 4, catalytic subunit
PRAMEF17 PRAME family member 17
PRR30 proline rich 30
PTPN13 protein tyrosine phosphatase, non-receptor type 13 (APO-1/CD95 (Fas)-associated phosphatase)
PTX3 pentraxin 3, long
R3HDM1 R3H domain containing 1
RAB3C RAB3C, member RAS oncogene family
RARRES1 retinoic acid receptor responder (tazarotene induced) 1
RASSF5 Ras association (RalGDS/AF-6) domain family member 5
RBP5 retinol binding protein 5, cellular
RIPK4 receptor-interacting serine-threonine kinase 4
RNU11 RNA, U11 small nuclear
RPL13A ribosomal protein L13a
RPL13AP20 ribosomal protein L13a pseudogene 20
RPL27 ribosomal protein L27
RPL35A ribosomal protein L35a
RPS11 ribosomal protein S11
RPS15A ribosomal protein S15a
SCARNA4 small Cajal body-specific RNA 4
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
SEPT12 septin 12
SERPINE2 serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 2
SH3BGRL2 SH3 domain binding glutamate-rich protein like 2
SHISA2 shisa family member 2
SHISA3 shisa family member 3
SIGLEC12 sialic acid binding Ig-like lectin 12 (gene/pseudogene)
SIPA1L2 signal-induced proliferation-associated 1 like 2
SLC22A8 solute carrier family 22 (organic anion transporter), member 8
SLC25A40 solute carrier family 25, member 40
SLC25A42 solute carrier family 25, member 42
SMN1 survival of motor neuron 1, telomeric
SNORA11 small nucleolar RNA, H/ACA box 11
SNORA14B small nucleolar RNA, H/ACA box 14B
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA69 small nucleolar RNA, H/ACA box 69
SNORA74A small nucleolar RNA, H/ACA box 74A
SNORA75 small nucleolar RNA, H/ACA box 75
SOAT1 sterol O-acyltransferase 1
STIM2 stromal interaction molecule 2
SWSAP1 SWIM-type zinc finger 7 associated protein 1
SYP synaptophysin
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TAS2R13 taste receptor, type 2, member 13
TAS2R60 taste receptor, type 2, member 60
TCL1A T-cell leukemia/lymphoma 1A
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TFRC transferrin receptor
TLCD1 TLC domain containing 1
TMEM101 transmembrane protein 101
TMEM143 transmembrane protein 143
TOMM40L translocase of outer mitochondrial membrane 40 homolog (yeast)-like
TP53TG5 TP53 target 5
TPD52L3 tumor protein D52-like 3
TPT1 tumor protein, translationally-controlled 1
TREML2 triggering receptor expressed on myeloid cells-like 2
TRPC4 transient receptor potential cation channel, subfamily C, member 4
TSN translin
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TUSC2 tumor suppressor candidate 2
TXK TXK tyrosine kinase
UBFD1 ubiquitin family domain containing 1
UGT1A4 UDP glucuronosyltransferase 1 family, polypeptide A4
USP17L2 ubiquitin specific peptidase 17-like family member 2
VASN vasorin
VPREB3 pre-B lymphocyte 3
ZC2HC1B zinc finger, C2HC-type containing 1B
ZC3H13 zinc finger CCCH-type containing 13
ZG16 zymogen granule protein 16
ZNF286B zinc finger protein 286B
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF69 zinc finger protein 69
ZNF71 zinc finger protein 71
ZNF713 zinc finger protein 713
ZNF835 zinc finger protein 835
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
ADO 2-aminoethanethiol (cysteamine) dioxygenase
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12