Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J5-06A-11R-A20F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

218 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J5-06A-11R-A20F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACSF3 acyl-CoA synthetase family member 3
ACSM4 acyl-CoA synthetase medium-chain family member 4
ADAL adenosine deaminase-like
AGAP11 ankyrin repeat and GTPase domain Arf GTPase activating protein 11
ALYREF Aly/REF export factor
ANXA3 annexin A3
ARL17A ADP-ribosylation factor-like 17A
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa
ARSG arylsulfatase G
ASB12 ankyrin repeat and SOCS box containing 12
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATP5J2 ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F2
ATP6V0E2 ATPase, H+ transporting V0 subunit e2
BRPF1 bromodomain and PHD finger containing, 1
BSX brain-specific homeobox
C8ORF33 chromosome 8 open reading frame 33
CA8 carbonic anhydrase VIII
CANT1 calcium activated nucleotidase 1
CASC2 cancer susceptibility candidate 2 (non-protein coding)
CASR calcium-sensing receptor
CCDC109B coiled-coil domain containing 109B
CCDC132 coiled-coil domain containing 132
CCDC54 coiled-coil domain containing 54
CD177 CD177 molecule
CDK12 cyclin-dependent kinase 12
CFAP61 cilia and flagella associated protein 61
COASY CoA synthase
COIL coilin
CRHR1-IT1 CRHR1 intronic transcript 1
CRYBB2 crystallin, beta B2
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CXORF40B chromosome X open reading frame 40B
DEFB136 defensin, beta 136
DHRS11 dehydrogenase/reductase (SDR family) member 11
DIABLO diablo, IAP-binding mitochondrial protein
DPCR1 diffuse panbronchiolitis critical region 1
DSG2 desmoglein 2
DYX1C1 dyslexia susceptibility 1 candidate 1
ECD ecdysoneless homolog (Drosophila)
EMC3 ER membrane protein complex subunit 3
F11R F11 receptor
FAM104A family with sequence similarity 104, member A
FAM118A family with sequence similarity 118, member A
FAM133B family with sequence similarity 133, member B
FAM184A family with sequence similarity 184, member A
FAM21A family with sequence similarity 21, member A
FAM71C family with sequence similarity 71, member C
FASTKD2 FAST kinase domains 2
FASTKD5 FAST kinase domains 5
FBXO25 F-box protein 25
FERD3L Fer3-like bHLH transcription factor
FHL2 four and a half LIM domains 2
FIG4 FIG4 phosphoinositide 5-phosphatase
FLNA filamin A, alpha
FRK fyn-related Src family tyrosine kinase
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GATB glutamyl-tRNA(Gln) amidotransferase, subunit B
GJA3 gap junction protein, alpha 3, 46kDa
GLYCTK glycerate kinase
GNAS-AS1 GNAS antisense RNA 1
GNG11 guanine nucleotide binding protein (G protein), gamma 11
GOLGA3 golgin A3
GOSR2 golgi SNAP receptor complex member 2
GPR161 G protein-coupled receptor 161
GSTT2 glutathione S-transferase theta 2 (gene/pseudogene)
HES6 hes family bHLH transcription factor 6
HESX1 HESX homeobox 1
HEXA hexosaminidase A (alpha polypeptide)
HMGB3P1 high mobility group box 3 pseudogene 1
HSFY2 heat shock transcription factor, Y linked 2
IDO1 indoleamine 2,3-dioxygenase 1
IL31 interleukin 31
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5
KIAA0020 KIAA0020
KLHL32 kelch-like family member 32
LAMA1 laminin, alpha 1
LINC00305 long intergenic non-protein coding RNA 305
LOC152225 uncharacterized LOC152225
LOC400043 uncharacterized LOC400043
LOC441454 prothymosin, alpha pseudogene
LOH12CR1 loss of heterozygosity, 12, chromosomal region 1
LONP2 lon peptidase 2, peroxisomal
LRRC59 leucine rich repeat containing 59
LSM1 LSM1, U6 small nuclear RNA associated
MAGED4B melanoma antigen family D4B
MAP2K6 mitogen-activated protein kinase kinase 6
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MCTP2 multiple C2 domains, transmembrane 2
MESDC1 mesoderm development candidate 1
MET MET proto-oncogene, receptor tyrosine kinase
METTL2A methyltransferase like 2A
MFSD9 major facilitator superfamily domain containing 9
MICA MHC class I polypeptide-related sequence A
MLIP muscular LMNA-interacting protein
MPDZ multiple PDZ domain protein
MRPS23 mitochondrial ribosomal protein S23
MTIF2 mitochondrial translational initiation factor 2
MTMR4 myotubularin related protein 4
MXRA7 matrix-remodelling associated 7
MYO5C myosin VC
NAA20 N(alpha)-acetyltransferase 20, NatB catalytic subunit
NARF nuclear prelamin A recognition factor
NFE2L1 nuclear factor, erythroid 2-like 1
NIFK nucleolar protein interacting with the FHA domain of MKI67
NLRP11 NLR family, pyrin domain containing 11
NMT1 N-myristoyltransferase 1
NOL4L nucleolar protein 4-like
NOL9 nucleolar protein 9
NPLOC4 nuclear protein localization 4 homolog (S. cerevisiae)
NRG3 neuregulin 3
NRROS negative regulator of reactive oxygen species
NT5DC3 5'-nucleotidase domain containing 3
OAZ3 ornithine decarboxylase antizyme 3
OMP olfactory marker protein
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR1D4 olfactory receptor, family 1, subfamily D, member 4 (gene/pseudogene)
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR2A5 olfactory receptor, family 2, subfamily A, member 5
OR2G6 olfactory receptor, family 2, subfamily G, member 6
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR52K2 olfactory receptor, family 52, subfamily K, member 2
OR5E1P olfactory receptor, family 5, subfamily E, member 1 pseudogene
OSBPL7 oxysterol binding protein-like 7
P4HB prolyl 4-hydroxylase, beta polypeptide
PCDHGA8 protocadherin gamma subfamily A, 8
PDK4 pyruvate dehydrogenase kinase, isozyme 4
PDRG1 p53 and DNA-damage regulated 1
PENK proenkephalin
PEX26 peroxisomal biogenesis factor 26
PEX3 peroxisomal biogenesis factor 3
PGS1 phosphatidylglycerophosphate synthase 1
PHB prohibitin
PITX2 paired-like homeodomain 2
PLXND1 plexin D1
PMS2P1 postmeiotic segregation increased 2 pseudogene 1
PMS2P3 postmeiotic segregation increased 2 pseudogene 3
PMS2P5 postmeiotic segregation increased 2 pseudogene 5
PON3 paraoxonase 3
PPBPP2 pro-platelet basic protein pseudogene 2
PPCDC phosphopantothenoylcysteine decarboxylase
PPP1R3B protein phosphatase 1, regulatory subunit 3B
PRDM4 PR domain containing 4
PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene
PSMD1 proteasome (prosome, macropain) 26S subunit, non-ATPase, 1
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PTPRB protein tyrosine phosphatase, receptor type, B
PTPRU protein tyrosine phosphatase, receptor type, U
PWARSN Prader Willi/Angelman region RNA, SNRPN neighbor
PWP1 PWP1 homolog (S. cerevisiae)
PXMP2 peroxisomal membrane protein 2, 22kDa
R3HCC1L R3H domain and coiled-coil containing 1-like
RAB17 RAB17, member RAS oncogene family
REPS1 RALBP1 associated Eps domain containing 1
RHEB Ras homolog enriched in brain
RLN1 relaxin 1
RMND1 required for meiotic nuclear division 1 homolog (S. cerevisiae)
RNFT2 ring finger protein, transmembrane 2
SAP30BP SAP30 binding protein
SCARNA17 small Cajal body-specific RNA 17
SCGB2B2 secretoglobin, family 2B, member 2
SEC11C SEC11 homolog C (S. cerevisiae)
SEPT4 septin 4
SIRT7 sirtuin 7
SLC25A13 solute carrier family 25 (aspartate/glutamate carrier), member 13
SLC25A14 solute carrier family 25 (mitochondrial carrier, brain), member 14
SLC25A44 solute carrier family 25, member 44
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC35B1 solute carrier family 35, member B1
SMPD4 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3)
SMS spermine synthase
SNHG20 small nucleolar RNA host gene 20
SNORA55 small nucleolar RNA, H/ACA box 55
SNX11 sorting nexin 11
SNX3 sorting nexin 3
SNX9 sorting nexin 9
SPDYE2 speedy/RINGO cell cycle regulator family member E2
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPDYE6 speedy/RINGO cell cycle regulator family member E6
ST3GAL4 ST3 beta-galactoside alpha-2,3-sialyltransferase 4
STX11 syntaxin 11
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
TCTEX1D4 Tctex1 domain containing 4
TDRD1 tudor domain containing 1
TFB1M transcription factor B1, mitochondrial
TIGAR TP53 induced glycolysis regulatory phosphatase
TIMP2 TIMP metallopeptidase inhibitor 2
TMEM104 transmembrane protein 104
TMEM241 transmembrane protein 241
TMEM26 transmembrane protein 26
TMEM41A transmembrane protein 41A
TOM1L1 target of myb1 (chicken)-like 1
TPGS2 tubulin polyglutamylase complex subunit 2
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSC22D4 TSC22 domain family, member 4
TSN translin
TTR transthyretin
TTYH2 tweety family member 2
UBL4A ubiquitin-like 4A
UCN3 urocortin 3
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
UTP20 UTP20, small subunit (SSU) processome component, homolog (yeast)
VMP1 vacuole membrane protein 1
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae)
VPS33A vacuolar protein sorting 33 homolog A (S. cerevisiae)
WDR61 WD repeat domain 61
XXYLT1 xyloside xylosyltransferase 1
ZACN zinc activated ligand-gated ion channel
ZBED6CL ZBED6 C-terminal like
ZNF204P zinc finger protein 204, pseudogene
ZNF620 zinc finger protein 620
ZNF71 zinc finger protein 71
ZNF749 zinc finger protein 749
ZNF830 zinc finger protein 830
ZNHIT3 zinc finger, HIT-type containing 3

low expression

Symbol Name
CLUAP1 clusterin associated protein 1
PHF12 PHD finger protein 12