Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J3-06A-11R-A20F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

220 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3J3-06A-11R-A20F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA17P ATP-binding cassette, sub-family A (ABC1), member 17, pseudogene
ADAMTS17 ADAM metallopeptidase with thrombospondin type 1 motif, 17
ADAP1 ArfGAP with dual PH domains 1
ADGRF5 adhesion G protein-coupled receptor F5
ADRA2C adrenoceptor alpha 2C
AFAP1 actin filament associated protein 1
APOC4 apolipoprotein C-IV
ARL5C ADP-ribosylation factor-like 5C
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
BFAR bifunctional apoptosis regulator
C11ORF85 chromosome 11 open reading frame 85
C12ORF76 chromosome 12 open reading frame 76
C1ORF101 chromosome 1 open reading frame 101
C1ORF21 chromosome 1 open reading frame 21
C1QTNF8 C1q and tumor necrosis factor related protein 8
C20ORF196 chromosome 20 open reading frame 196
C4ORF3 chromosome 4 open reading frame 3
C7ORF13 chromosome 7 open reading frame 13
C9ORF106 chromosome 9 open reading frame 106
C9ORF170 chromosome 9 open reading frame 170
C9ORF173 chromosome 9 open reading frame 173
CA5A carbonic anhydrase VA, mitochondrial
CABP4 calcium binding protein 4
CACNA1A calcium channel, voltage-dependent, P/Q type, alpha 1A subunit
CARD6 caspase recruitment domain family, member 6
CATSPER1 cation channel, sperm associated 1
CCDC125 coiled-coil domain containing 125
CCNA2 cyclin A2
CDADC1 cytidine and dCMP deaminase domain containing 1
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CEACAM20 carcinoembryonic antigen-related cell adhesion molecule 20
CEP162 centrosomal protein 162kDa
CFHR3 complement factor H-related 3
CGREF1 cell growth regulator with EF-hand domain 1
CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
CLCN4 chloride channel, voltage-sensitive 4
CLPX caseinolytic mitochondrial matrix peptidase chaperone subunit
COQ7 coenzyme Q7 homolog, ubiquinone (yeast)
CPM carboxypeptidase M
CPN1 carboxypeptidase N, polypeptide 1
CPO carboxypeptidase O
CT55 cancer/testis antigen 55
CYB5R4 cytochrome b5 reductase 4
CYP1B1 cytochrome P450, family 1, subfamily B, polypeptide 1
DCAF16 DDB1 and CUL4 associated factor 16
DDX43 DEAD (Asp-Glu-Ala-Asp) box polypeptide 43
DDX60L DEAD (Asp-Glu-Ala-Asp) box polypeptide 60-like
DGKI diacylglycerol kinase, iota
DLX6-AS1 DLX6 antisense RNA 1
DMRT1 doublesex and mab-3 related transcription factor 1
DNASE2B deoxyribonuclease II beta
DSG2 desmoglein 2
EFCAB5 EF-hand calcium binding domain 5
EGF epidermal growth factor
EID2B EP300 interacting inhibitor of differentiation 2B
EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3
ELF1 E74-like factor 1 (ets domain transcription factor)
ERVFRD-1 endogenous retrovirus group FRD, member 1
EVPLL envoplakin-like
EWSAT1 Ewing sarcoma associated transcript 1
FAM184B family with sequence similarity 184, member B
FASTKD5 FAST kinase domains 5
FEM1B fem-1 homolog b (C. elegans)
FKSG29 FKSG29
FOXA3 forkhead box A3
GABPA GA binding protein transcription factor, alpha subunit 60kDa
GABRR2 gamma-aminobutyric acid (GABA) A receptor, rho 2
GAGE12J G antigen 12J
GDE1 glycerophosphodiester phosphodiesterase 1
GFRAL GDNF family receptor alpha like
GJA3 gap junction protein, alpha 3, 46kDa
GLS2 glutaminase 2 (liver, mitochondrial)
GNG10 guanine nucleotide binding protein (G protein), gamma 10
GNRH2 gonadotropin-releasing hormone 2
GPHA2 glycoprotein hormone alpha 2
GPR152 G protein-coupled receptor 152
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRIK1-AS1 GRIK1 antisense RNA 1
GRIN2C glutamate receptor, ionotropic, N-methyl D-aspartate 2C
GSTTP2 glutathione S-transferase theta pseudogene 2
GUCY1B2 guanylate cyclase 1, soluble, beta 2 (pseudogene)
HYLS1 hydrolethalus syndrome 1
IFNL1 interferon, lambda 1
IFNL2 interferon, lambda 2
IFNL3 interferon, lambda 3
INPP4B inositol polyphosphate-4-phosphatase, type II, 105kDa
IQCK IQ motif containing K
ISL1 ISL LIM homeobox 1
JARID2 jumonji, AT rich interactive domain 2
KCNE2 potassium channel, voltage gated subfamily E regulatory beta subunit 2
KCNJ12 potassium channel, inwardly rectifying subfamily J, member 12
KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KDM1B lysine (K)-specific demethylase 1B
KIAA0101 KIAA0101
KLHL30 kelch-like family member 30
KNOP1 lysine-rich nucleolar protein 1
KRBA2 KRAB-A domain containing 2
LCN10 lipocalin 10
LENG9 leukocyte receptor cluster (LRC) member 9
LGSN lengsin, lens protein with glutamine synthetase domain
LINC00032 long intergenic non-protein coding RNA 32
LINC00472 long intergenic non-protein coding RNA 472
LINC00482 long intergenic non-protein coding RNA 482
LINC01590 long intergenic non-protein coding RNA 1590
LOC100128239 uncharacterized LOC100128239
LOC100270746 uncharacterized LOC100270746
LOC100271832 uncharacterized LOC100271832
LOC100272217 uncharacterized LOC100272217
LOC145783 uncharacterized LOC145783
LOC646214 p21 protein (Cdc42/Rac)-activated kinase 2 pseudogene
LOC93622 Morf4 family associated protein 1-like 1 pseudogene
LOXL4 lysyl oxidase-like 4
LRRC4B leucine rich repeat containing 4B
LY6G6E lymphocyte antigen 6 complex, locus G6E (pseudogene)
LY6K lymphocyte antigen 6 complex, locus K
LYRM2 LYR motif containing 2
MAG myelin associated glycoprotein
MED7 mediator complex subunit 7
MEF2A myocyte enhancer factor 2A
MICU2 mitochondrial calcium uptake 2
MMS22L MMS22-like, DNA repair protein
MOG myelin oligodendrocyte glycoprotein
MRAP2 melanocortin 2 receptor accessory protein 2
MRPS6 mitochondrial ribosomal protein S6
MTIF3 mitochondrial translational initiation factor 3
MTRF1 mitochondrial translational release factor 1
MTSS1 metastasis suppressor 1
MX2 MX dynamin-like GTPase 2
MYLK4 myosin light chain kinase family, member 4
NCAPG non-SMC condensin I complex, subunit G
NDN necdin, melanoma antigen (MAGE) family member
NDUFAF4 NADH dehydrogenase (ubiquinone) complex I, assembly factor 4
NEIL3 nei endonuclease VIII-like 3 (E. coli)
NKX2-4 NK2 homeobox 4
NMI N-myc (and STAT) interactor
NRGN neurogranin (protein kinase C substrate, RC3)
NUDCD2 NudC domain containing 2
OGFRL1 opioid growth factor receptor-like 1
OLFM1 olfactomedin 1
OOEP oocyte expressed protein
OR1C1 olfactory receptor, family 1, subfamily C, member 1
OR2A2 olfactory receptor, family 2, subfamily A, member 2
OR52B6 olfactory receptor, family 52, subfamily B, member 6
OR6F1 olfactory receptor, family 6, subfamily F, member 1
P3H2 prolyl 3-hydroxylase 2
PARN poly(A)-specific ribonuclease
PARP4 poly (ADP-ribose) polymerase family, member 4
PCP2 Purkinje cell protein 2
PDCL phosducin-like
PHF19 PHD finger protein 19
PI15 peptidase inhibitor 15
PIGW phosphatidylinositol glycan anchor biosynthesis, class W
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLXNA2 plexin A2
PM20D2 peptidase M20 domain containing 2
PPM1K protein phosphatase, Mg2+/Mn2+ dependent, 1K
PPP6C protein phosphatase 6, catalytic subunit
PRDM12 PR domain containing 12
PRORSD1P prolyl-tRNA synthetase associated domain containing 1, pseudogene
RAB14 RAB14, member RAS oncogene family
RAD50 RAD50 homolog (S. cerevisiae)
RDM1 RAD52 motif containing 1
REC114 REC114 meiotic recombination protein
RIMBP3C RIMS binding protein 3C
RNASE11 ribonuclease, RNase A family, 11 (non-active)
RNF212 ring finger protein 212
RNF219 ring finger protein 219
RNF32 ring finger protein 32
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
RPSAP52 ribosomal protein SA pseudogene 52
RSAD2 radical S-adenosyl methionine domain containing 2
RSL1D1 ribosomal L1 domain containing 1
SAGE1 sarcoma antigen 1
SAYSD1 SAYSVFN motif domain containing 1
SDCCAG3 serologically defined colon cancer antigen 3
SET SET nuclear proto-oncogene
SHISA2 shisa family member 2
SKA3 spindle and kinetochore associated complex subunit 3
SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1
SLFN12 schlafen family member 12
SMAP1 small ArfGAP 1
SMC2 structural maintenance of chromosomes 2
SNHG4 small nucleolar RNA host gene 4
SNHG5 small nucleolar RNA host gene 5
SPATA24 spermatogenesis associated 24
SPATS1 spermatogenesis associated, serine-rich 1
SREK1IP1 SREK1-interacting protein 1
SSUH2 ssu-2 homolog (C. elegans)
SSX4 synovial sarcoma, X breakpoint 4
SSX5 synovial sarcoma, X breakpoint 5
SSX6 synovial sarcoma, X breakpoint 6 (pseudogene)
SSX7 synovial sarcoma, X breakpoint 7
STAG3L2 stromal antigen 3-like 2 (pseudogene)
STOM stomatin
STRBP spermatid perinuclear RNA binding protein
SYNCRIP synaptotagmin binding, cytoplasmic RNA interacting protein
TBX20 T-box 20
TEX9 testis expressed 9
TH tyrosine hydroxylase
TJP1 tight junction protein 1
TOMM20L translocase of outer mitochondrial membrane 20 homolog (yeast)-like
TRIP4 thyroid hormone receptor interactor 4
TTF1 transcription termination factor, RNA polymerase I
TTK TTK protein kinase
TXK TXK tyrosine kinase
TYMSOS TYMS opposite strand
UBE2K ubiquitin-conjugating enzyme E2K
UBE3D ubiquitin protein ligase E3D
VWA9 von Willebrand factor A domain containing 9
WBP4 WW domain binding protein 4
XAGE3 X antigen family, member 3
XRCC4 X-ray repair complementing defective repair in Chinese hamster cells 4
ZBED8 zinc finger, BED-type containing 8
ZBTB43 zinc finger and BTB domain containing 43
ZCCHC10 zinc finger, CCHC domain containing 10
ZCCHC14 zinc finger, CCHC domain containing 14
ZNF283 zinc finger protein 283
ZNF541 zinc finger protein 541