Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AC-06A-11R-A18S-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

344 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A3AC-06A-11R-A18S-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AASDH aminoadipate-semialdehyde dehydrogenase
ABCA5 ATP-binding cassette, sub-family A (ABC1), member 5
ABCB10 ATP-binding cassette, sub-family B (MDR/TAP), member 10
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACOT4 acyl-CoA thioesterase 4
ACTL10 actin-like 10
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
AFAP1 actin filament associated protein 1
AGBL2 ATP/GTP binding protein-like 2
AHNAK2 AHNAK nucleoprotein 2
AK5 adenylate kinase 5
AKAP9 A kinase (PRKA) anchor protein 9
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough
ANKRD31 ankyrin repeat domain 31
ANKRD36B ankyrin repeat domain 36B
ANP32A-IT1 ANP32A intronic transcript 1
ARGFXP2 arginine-fifty homeobox pseudogene 2
ARHGAP23 Rho GTPase activating protein 23
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARID5B AT rich interactive domain 5B (MRF1-like)
ARMC9 armadillo repeat containing 9
ARMS2 age-related maculopathy susceptibility 2
ARSG arylsulfatase G
ATAD5 ATPase family, AAA domain containing 5
ATP4A ATPase, H+/K+ exchanging, alpha polypeptide
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
ATP7A ATPase, Cu++ transporting, alpha polypeptide
ATP9A ATPase, class II, type 9A
BIVM basic, immunoglobulin-like variable motif containing
BMPR1A bone morphogenetic protein receptor, type IA
BMS1P4 BMS1 ribosome biogenesis factor pseudogene 4
BNC2 basonuclin 2
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1
BPTF bromodomain PHD finger transcription factor
BRCA1 breast cancer 1, early onset
BSN bassoon presynaptic cytomatrix protein
BTBD19 BTB (POZ) domain containing 19
C1ORF220 chromosome 1 open reading frame 220
C9ORF129 chromosome 9 open reading frame 129
CA8 carbonic anhydrase VIII
CALML6 calmodulin-like 6
CANT1 calcium activated nucleotidase 1
CASC2 cancer susceptibility candidate 2 (non-protein coding)
CBWD6 COBW domain containing 6
CCDC142 coiled-coil domain containing 142
CCDC180 coiled-coil domain containing 180
CCDC7 coiled-coil domain containing 7
CCDC74A coiled-coil domain containing 74A
CCDC85B coiled-coil domain containing 85B
CCR10 chemokine (C-C motif) receptor 10
CDC73 cell division cycle 73
CDK12 cyclin-dependent kinase 12
CDKL2 cyclin-dependent kinase-like 2 (CDC2-related kinase)
CDON cell adhesion associated, oncogene regulated
CELF2 CUGBP, Elav-like family member 2
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CEP120 centrosomal protein 120kDa
CEP164 centrosomal protein 164kDa
CEP170 centrosomal protein 170kDa
CEP170P1 centrosomal protein 170kDa pseudogene 1
CEP250 centrosomal protein 250kDa
CHRNG cholinergic receptor, nicotinic, gamma (muscle)
CLEC5A C-type lectin domain family 5, member A
CLRN2 clarin 2
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1
CNRIP1 cannabinoid receptor interacting protein 1
CNST consortin, connexin sorting protein
CNTF ciliary neurotrophic factor
COBLL1 cordon-bleu WH2 repeat protein-like 1
COL20A1 collagen, type XX, alpha 1
CPNE7 copine VII
CUBN cubilin (intrinsic factor-cobalamin receptor)
DBF4B DBF4 zinc finger B
DDIT4 DNA-damage-inducible transcript 4
DENND1B DENN/MADD domain containing 1B
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DHFRL1 dihydrofolate reductase-like 1
DHX35 DEAH (Asp-Glu-Ala-His) box polypeptide 35
DOC2A double C2-like domains, alpha
DZIP1L DAZ interacting zinc finger protein 1-like
EGLN1 egl-9 family hypoxia-inducible factor 1
EHD4 EH-domain containing 4
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4
EIF3A eukaryotic translation initiation factor 3, subunit A
ELFN1 extracellular leucine-rich repeat and fibronectin type III domain containing 1
EME2 essential meiotic structure-specific endonuclease subunit 2
ENGASE endo-beta-N-acetylglucosaminidase
ENTHD1 ENTH domain containing 1
EPS8 epidermal growth factor receptor pathway substrate 8
ERBB2 erb-b2 receptor tyrosine kinase 2
ERCC6 excision repair cross-complementation group 6
ERCC6L2 excision repair cross-complementation group 6-like 2
ERN1 endoplasmic reticulum to nucleus signaling 1
ESPL1 extra spindle pole bodies homolog 1 (S. cerevisiae)
F2R coagulation factor II (thrombin) receptor
FAM126A family with sequence similarity 126, member A
FAM175A family with sequence similarity 175, member A
FAM178A family with sequence similarity 178, member A
FAM198B family with sequence similarity 198, member B
FAM210A family with sequence similarity 210, member A
FAM21A family with sequence similarity 21, member A
FAM222B family with sequence similarity 222, member B
FAM53A family with sequence similarity 53, member A
FAM66E family with sequence similarity 66, member E
FAM71B family with sequence similarity 71, member B
FAM71C family with sequence similarity 71, member C
FAM90A7P putative protein FAM90A7
FBF1 Fas (TNFRSF6) binding factor 1
FEM1B fem-1 homolog b (C. elegans)
FFAR4 free fatty acid receptor 4
FGD4 FYVE, RhoGEF and PH domain containing 4
FGF13 fibroblast growth factor 13
FIP1L1 factor interacting with PAPOLA and CPSF1
FITM2 fat storage-inducing transmembrane protein 2
FLNB filamin B, beta
FLVCR1 feline leukemia virus subgroup C cellular receptor 1
FNDC8 fibronectin type III domain containing 8
FNIP1 folliculin interacting protein 1
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
GAS5 growth arrest-specific 5 (non-protein coding)
GGNBP2 gametogenetin binding protein 2
GJA3 gap junction protein, alpha 3, 46kDa
GJC1 gap junction protein, gamma 1, 45kDa
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
GPATCH8 G patch domain containing 8
GPR27 G protein-coupled receptor 27
GPR63 G protein-coupled receptor 63
H1FOO H1 histone family, member O, oocyte-specific
HACD1 3-hydroxyacyl-CoA dehydratase 1
HACD2 3-hydroxyacyl-CoA dehydratase 2
HDAC5 histone deacetylase 5
HEATR5A HEAT repeat containing 5A
HELZ helicase with zinc finger
HELZ2 helicase with zinc finger 2, transcriptional coactivator
HIST2H2BA histone cluster 2, H2ba (pseudogene)
HIST2H2BF histone cluster 2, H2bf
HIST2H3C histone cluster 2, H3c
HIST2H3D histone cluster 2, H3d
HIST2H4A histone cluster 2, H4a
HMCN1 hemicentin 1
HSD17B11 hydroxysteroid (17-beta) dehydrogenase 11
IGF2BP2-AS1 IGF2BP2 antisense RNA 1
IL6R interleukin 6 receptor
INTS2 integrator complex subunit 2
INVS inversin
IRS2 insulin receptor substrate 2
ITCH itchy E3 ubiquitin protein ligase
KANSL1 KAT8 regulatory NSL complex subunit 1
KIAA1328 KIAA1328
KIAA1407 KIAA1407
KIAA1614 KIAA1614
KIF11 kinesin family member 11
KIF20B kinesin family member 20B
KIF3B kinesin family member 3B
KIRREL kin of IRRE like (Drosophila)
KLF6 Kruppel-like factor 6
KLHL11 kelch-like family member 11
LCOR ligand dependent nuclear receptor corepressor
LDB1 LIM domain binding 1
LINC00488 long intergenic non-protein coding RNA 488
LINC00597 long intergenic non-protein coding RNA 597
LOC100133050 glucuronidase, beta pseudogene
LOC100192426 uncharacterized LOC100192426
LOC145783 uncharacterized LOC145783
LOC641367 cyclin Y-like 1 pseudogene
LOC728323 uncharacterized LOC728323
LPIN3 lipin 3
LRRC37B leucine rich repeat containing 37B
LRRC56 leucine rich repeat containing 56
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3
MAPKBP1 mitogen-activated protein kinase binding protein 1
MARVELD1 MARVEL domain containing 1
MCTP1 multiple C2 domains, transmembrane 1
MED1 mediator complex subunit 1
MOCS3 molybdenum cofactor synthesis 3
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MTCL1 microtubule crosslinking factor 1
MTMR10 myotubularin related protein 10
MYO18A myosin XVIIIA
MYO19 myosin XIX
MYO9A myosin IXA
MYOF myoferlin
NBR1 neighbor of BRCA1 gene 1
NCOA6 nuclear receptor coactivator 6
NEURL2 neuralized E3 ubiquitin protein ligase 2
NF1 neurofibromin 1
NHLRC2 NHL repeat containing 2
NLN neurolysin (metallopeptidase M3 family)
NPHP3 nephronophthisis 3 (adolescent)
NXNL2 nucleoredoxin-like 2
NYAP1 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
OAS3 2'-5'-oligoadenylate synthetase 3, 100kDa
ONECUT1 one cut homeobox 1
OR51V1 olfactory receptor, family 51, subfamily V, member 1
OTUD7B OTU deubiquitinase 7B
PARD3 par-3 family cell polarity regulator
PATE1 prostate and testis expressed 1
PATE2 prostate and testis expressed 2
PCDHGB7 protocadherin gamma subfamily B, 7
PCGF2 polycomb group ring finger 2
PCTP phosphatidylcholine transfer protein
PDE4C phosphodiesterase 4C, cAMP-specific
PDZD7 PDZ domain containing 7
PGBD3 piggyBac transposable element derived 3
PHF12 PHD finger protein 12
PHF20 PHD finger protein 20
PHLDB1 pleckstrin homology-like domain, family B, member 1
PLAGL2 pleiomorphic adenoma gene-like 2
PMCHL2 pro-melanin-concentrating hormone-like 2, pseudogene
POC1B POC1 centriolar protein B
POFUT1 protein O-fucosyltransferase 1
POLG2 polymerase (DNA directed), gamma 2, accessory subunit
POU2F1 POU class 2 homeobox 1
PRB3 proline-rich protein BstNI subfamily 3
PRDM10 PR domain containing 10
PTAR1 protein prenyltransferase alpha subunit repeat containing 1
PTPDC1 protein tyrosine phosphatase domain containing 1
PTPN14 protein tyrosine phosphatase, non-receptor type 14
PYGB phosphorylase, glycogen; brain
R3HCC1L R3H domain and coiled-coil containing 1-like
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RAB8B RAB8B, member RAS oncogene family
RAB9BP1 RAB9B, member RAS oncogene family pseudogene 1
RAD51D RAD51 paralog D
RALGAPB Ral GTPase activating protein, beta subunit (non-catalytic)
RALGPS2 Ral GEF with PH domain and SH3 binding motif 2
RANBP17 RAN binding protein 17
RBL1 retinoblastoma-like 1
RBP2 retinol binding protein 2, cellular
RDX radixin
RGS2 regulator of G-protein signaling 2
RHOBTB3 Rho-related BTB domain containing 3
RHOT1 ras homolog family member T1
RMI1 RecQ mediated genome instability 1
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RNF169 ring finger protein 169
RNF213 ring finger protein 213
RPL32P3 ribosomal protein L32 pseudogene 3
RPRD1A regulation of nuclear pre-mRNA domain containing 1A
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RPS6KA5 ribosomal protein S6 kinase, 90kDa, polypeptide 5
RPS6KA6 ribosomal protein S6 kinase, 90kDa, polypeptide 6
RUNDC1 RUN domain containing 1
SAMHD1 SAM domain and HD domain 1
SARM1 sterile alpha and TIR motif containing 1
SAXO1 stabilizer of axonemal microtubules 1
SCARNA16 small Cajal body-specific RNA 16
SCARNA9 small Cajal body-specific RNA 9
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SDHAP1 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 1
SEC14L3 SEC14-like 3 (S. cerevisiae)
SERINC3 serine incorporator 3
SFI1 Sfi1 homolog, spindle assembly associated (yeast)
SFXN3 sideroflexin 3
SIK2 salt-inducible kinase 2
SLC16A5 solute carrier family 16 (monocarboxylate transporter), member 5
SLC1A4 solute carrier family 1 (glutamate/neutral amino acid transporter), member 4
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC27A1 solute carrier family 27 (fatty acid transporter), member 1
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SNHG12 small nucleolar RNA host gene 12
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORD1C small nucleolar RNA, C/D box 1C
SNRK SNF related kinase
SNX25 sorting nexin 25
SOGA1 suppressor of glucose, autophagy associated 1
SORBS2 sorbin and SH3 domain containing 2
SPAG9 sperm associated antigen 9
SPATA25 spermatogenesis associated 25
SPATA9 spermatogenesis associated 9
SPC24 SPC24, NDC80 kinetochore complex component
SPEF2 sperm flagellar 2
SPTLC2 serine palmitoyltransferase, long chain base subunit 2
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STK10 serine/threonine kinase 10
STK4 serine/threonine kinase 4
STKLD1 serine/threonine kinase-like domain containing 1
STXBP1 syntaxin binding protein 1
STXBP4 syntaxin binding protein 4
SUZ12 SUZ12 polycomb repressive complex 2 subunit
SYBU syntabulin (syntaxin-interacting)
SYNE2 spectrin repeat containing, nuclear envelope 2
TADA2A transcriptional adaptor 2A
TAOK1 TAO kinase 1
TAOK3 TAO kinase 3
TAS2R43 taste receptor, type 2, member 43
TBC1D3 TBC1 domain family, member 3
TBC1D3P2 TBC1 domain family, member 3 pseudogene 2
TCF12 transcription factor 12
TET1 tet methylcytosine dioxygenase 1
TET2 tet methylcytosine dioxygenase 2
TIMP2 TIMP metallopeptidase inhibitor 2
TLCD1 TLC domain containing 1
TLDC2 TBC/LysM-associated domain containing 2
TM9SF4 transmembrane 9 superfamily protein member 4
TMED5 transmembrane emp24 protein transport domain containing 5
TMEM101 transmembrane protein 101
TMEM161B transmembrane protein 161B
TMEM194B transmembrane protein 194B
TREH trehalase (brush-border membrane glycoprotein)
TRIM2 tripartite motif containing 2
TRIM33 tripartite motif containing 33
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TSSK6 testis-specific serine kinase 6
TTC12 tetratricopeptide repeat domain 12
TTI1 TELO2 interacting protein 1
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TYRO3 TYRO3 protein tyrosine kinase
UGT8 UDP glycosyltransferase 8
UHMK1 U2AF homology motif (UHM) kinase 1
UPF2 UPF2 regulator of nonsense transcripts homolog (yeast)
USP6NL USP6 N-terminal like
VAPB VAMP (vesicle-associated membrane protein)-associated protein B and C
VIM vimentin
VMP1 vacuole membrane protein 1
WDFY1 WD repeat and FYVE domain containing 1
WDFY3-AS2 WDFY3 antisense RNA 2
WDR17 WD repeat domain 17
WFDC8 WAP four-disulfide core domain 8
WIPF2 WAS/WASL interacting protein family, member 2
XYLB xylulokinase homolog (H. influenzae)
ZBTB10 zinc finger and BTB domain containing 10
ZCCHC14 zinc finger, CCHC domain containing 14
ZDHHC20 zinc finger, DHHC-type containing 20
ZFAS1 ZNFX1 antisense RNA 1
ZMIZ1 zinc finger, MIZ-type containing 1
ZMYM1 zinc finger, MYM-type 1
ZNF217 zinc finger protein 217
ZNF236 zinc finger protein 236
ZNF37A zinc finger protein 37A
ZNF483 zinc finger protein 483
ZNF491 zinc finger protein 491
ZNF496 zinc finger protein 496
ZNF514 zinc finger protein 514
ZNF516 zinc finger protein 516
ZNF518A zinc finger protein 518A
ZNF587 zinc finger protein 587
ZNF608 zinc finger protein 608
ZNF670 zinc finger protein 670
ZNF860 zinc finger protein 860