Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GP-06A-11R-A18S-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

416 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GP-06A-11R-A18S-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ABCD3 ATP-binding cassette, sub-family D (ALD), member 3
ADAMTS18 ADAM metallopeptidase with thrombospondin type 1 motif, 18
ADARB1 adenosine deaminase, RNA-specific, B1
ADGRG2 adhesion G protein-coupled receptor G2
ADGRL2 adhesion G protein-coupled receptor L2
ADGRL4 adhesion G protein-coupled receptor L4
AGL amylo-alpha-1, 6-glucosidase, 4-alpha-glucanotransferase
AGO1 argonaute RISC catalytic component 1
AGO4 argonaute RISC catalytic component 4
AMIGO1 adhesion molecule with Ig-like domain 1
ANKEF1 ankyrin repeat and EF-hand domain containing 1
ANKRD13C ankyrin repeat domain 13C
ANKRD50 ankyrin repeat domain 50
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
API5 apoptosis inhibitor 5
APPL1 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1
AQP9 aquaporin 9
ARHGAP42 Rho GTPase activating protein 42
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARVCF armadillo repeat gene deleted in velocardiofacial syndrome
ASAP1-IT1 ASAP1 intronic transcript 1
ASAP2 ArfGAP with SH3 domain, ankyrin repeat and PH domain 2
ATP13A3 ATPase type 13A3
AUNIP aurora kinase A and ninein interacting protein
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
BCL9L B-cell CLL/lymphoma 9-like
BMP2K BMP2 inducible kinase
BTBD3 BTB (POZ) domain containing 3
C11ORF42 chromosome 11 open reading frame 42
C11ORF57 chromosome 11 open reading frame 57
C17ORF58 chromosome 17 open reading frame 58
C1ORF109 chromosome 1 open reading frame 109
C1ORF174 chromosome 1 open reading frame 174
C22ORF29 chromosome 22 open reading frame 29
C5ORF24 chromosome 5 open reading frame 24
C9ORF131 chromosome 9 open reading frame 131
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit
CAPN7 calpain 7
CASP3 caspase 3, apoptosis-related cysteine peptidase
CCDC129 coiled-coil domain containing 129
CCDC37 coiled-coil domain containing 37
CDC42 cell division cycle 42
CDC7 cell division cycle 7
CDK6 cyclin-dependent kinase 6
CDON cell adhesion associated, oncogene regulated
CELF1 CUGBP, Elav-like family member 1
CENPE centromere protein E, 312kDa
CHL1 cell adhesion molecule L1-like
CLCC1 chloride channel CLIC-like 1
CMTM7 CKLF-like MARVEL transmembrane domain containing 7
CNKSR2 connector enhancer of kinase suppressor of Ras 2
CNTN3 contactin 3 (plasmacytoma associated)
CPS1 carbamoyl-phosphate synthase 1, mitochondrial
CPSF7 cleavage and polyadenylation specific factor 7, 59kDa
CTDSPL CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) small phosphatase-like
CTNNBIP1 catenin, beta interacting protein 1
CUL5 cullin 5
CYB5RL cytochrome b5 reductase-like
CYP2C9 cytochrome P450, family 2, subfamily C, polypeptide 9
DAZ3 deleted in azoospermia 3
DCAF16 DDB1 and CUL4 associated factor 16
DCLRE1B DNA cross-link repair 1B
DCP1A decapping mRNA 1A
DDHD2 DDHD domain containing 2
DENND5A DENN/MADD domain containing 5A
DENND6A DENN/MADD domain containing 6A
DEPDC1 DEP domain containing 1
DGCR8 DGCR8 microprocessor complex subunit
DLG1 discs, large homolog 1 (Drosophila)
DOK5 docking protein 5
DR1 down-regulator of transcription 1, TBP-binding (negative cofactor 2)
EGOT eosinophil granule ontogeny transcript (non-protein coding)
EI24 etoposide induced 2.4
EMCN endomucin
EPHX4 epoxide hydrolase 4
EPM2AIP1 EPM2A (laforin) interacting protein 1
ERG v-ets avian erythroblastosis virus E26 oncogene homolog
ERICH6 glutamate-rich 6
ERMAP erythroblast membrane-associated protein (Scianna blood group)
EVI5 ecotropic viral integration site 5
F13B coagulation factor XIII, B polypeptide
FABP4 fatty acid binding protein 4, adipocyte
FAM102B family with sequence similarity 102, member B
FAM205A family with sequence similarity 205, member A
FAM217B family with sequence similarity 217, member B
FAM73A family with sequence similarity 73, member A
FANCD2OS FANCD2 opposite strand
FBXL3 F-box and leucine-rich repeat protein 3
FGF16 fibroblast growth factor 16
FHL1 four and a half LIM domains 1
FKSG29 FKSG29
FNIP2 folliculin interacting protein 2
FSCN3 fascin actin-bundling protein 3, testicular
FXYD6 FXYD domain containing ion transport regulator 6
FYTTD1 forty-two-three domain containing 1
GAB1 GRB2-associated binding protein 1
GABRA3 gamma-aminobutyric acid (GABA) A receptor, alpha 3
GAGE12F G antigen 12F
GAGE2C G antigen 2C
GALNT7 polypeptide N-acetylgalactosaminyltransferase 7
GCLM glutamate-cysteine ligase, modifier subunit
GFRAL GDNF family receptor alpha like
GK5 glycerol kinase 5 (putative)
GLMN glomulin, FKBP associated protein
GLP1R glucagon-like peptide 1 receptor
GLRA1 glycine receptor, alpha 1
GNG12 guanine nucleotide binding protein (G protein), gamma 12
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GOLGA8F golgin A8 family, member F
GPR32 G protein-coupled receptor 32
GPRIN3 GPRIN family member 3
GPSM2 G-protein signaling modulator 2
GRM7 glutamate receptor, metabotropic 7
GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa
GTF2IRD2B GTF2I repeat domain containing 2B
GUCY2GP guanylate cyclase 2G, pseudogene
HABP2 hyaluronan binding protein 2
HENMT1 HEN1 methyltransferase homolog 1 (Arabidopsis)
HESX1 HESX homeobox 1
HIAT1 hippocampus abundant transcript 1
HIPK1 homeodomain interacting protein kinase 1
HIRA histone cell cycle regulator
HKDC1 hexokinase domain containing 1
HOOK3 hook microtubule-tethering protein 3
HRH2 histamine receptor H2
HS2ST1 heparan sulfate 2-O-sulfotransferase 1
HSFY2 heat shock transcription factor, Y linked 2
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic
HUNK hormonally up-regulated Neu-associated kinase
ICMT isoprenylcysteine carboxyl methyltransferase
IL5 interleukin 5
INADL InaD-like (Drosophila)
IPO5 importin 5
IQCF5 IQ motif containing F5
ISPD isoprenoid synthase domain containing
ITCH itchy E3 ubiquitin protein ligase
ITLN2 intelectin 2
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KIAA1109 KIAA1109
KIAA2018 KIAA2018
KIF1B kinesin family member 1B
KLF17 Kruppel-like factor 17
LANCL1 LanC lantibiotic synthetase component C-like 1 (bacterial)
LARP1B La ribonucleoprotein domain family, member 1B
LCORL ligand dependent nuclear receptor corepressor-like
LGR4 leucine-rich repeat containing G protein-coupled receptor 4
LIN54 lin-54 DREAM MuvB core complex component
LIN7C lin-7 homolog C (C. elegans)
LINC00240 long intergenic non-protein coding RNA 240
LINC00488 long intergenic non-protein coding RNA 488
LINC00696 long intergenic non-protein coding RNA 696
LINGO2 leucine rich repeat and Ig domain containing 2
LOC202181 SUMO-interacting motifs containing 1 pseudogene
LOC220729 succinate dehydrogenase complex, subunit A, flavoprotein (Fp) pseudogene
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC643486
LRIF1 ligand dependent nuclear receptor interacting factor 1
LRRC40 leucine rich repeat containing 40
LRRC58 leucine rich repeat containing 58
LRRC8C leucine rich repeat containing 8 family, member C
LZTS3 leucine zipper, putative tumor suppressor family member 3
MACF1 microtubule-actin crosslinking factor 1
MACROD2 MACRO domain containing 2
MADD MAP-kinase activating death domain
MAGEA9B melanoma antigen family A9B
MAGI3 membrane associated guanylate kinase, WW and PDZ domain containing 3
MAML2 mastermind-like 2 (Drosophila)
MAN1A2 mannosidase, alpha, class 1A, member 2
MAP7D2 MAP7 domain containing 2
MASP2 mannan-binding lectin serine peptidase 2
MAVS mitochondrial antiviral signaling protein
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MS4A6E membrane-spanning 4-domains, subfamily A, member 6E
MSL2 male-specific lethal 2 homolog (Drosophila)
MTF2 metal response element binding transcription factor 2
MTMR7 myotubularin related protein 7
NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1
NANP N-acetylneuraminic acid phosphatase
NBPF4 neuroblastoma breakpoint family, member 4
NBPF6 neuroblastoma breakpoint family, member 6
NDC1 NDC1 transmembrane nucleoporin
NELL1 NEL-like 1 (chicken)
NFRKB nuclear factor related to kappaB binding protein
NGLY1 N-glycanase 1
NIPAL1 NIPA-like domain containing 1
NKX3-2 NK3 homeobox 2
NMNAT1 nicotinamide nucleotide adenylyltransferase 1
NOL9 nucleolar protein 9
NOSTRIN nitric oxide synthase trafficking
NR2C2 nuclear receptor subfamily 2, group C, member 2
NRAS neuroblastoma RAS viral (v-ras) oncogene homolog
NSD1 nuclear receptor binding SET domain protein 1
ODF2L outer dense fiber of sperm tails 2-like
OR10K2 olfactory receptor, family 10, subfamily K, member 2
OR2G3 olfactory receptor, family 2, subfamily G, member 3
OR4D9 olfactory receptor, family 4, subfamily D, member 9
OR52N1 olfactory receptor, family 52, subfamily N, member 1
OR5W2 olfactory receptor, family 5, subfamily W, member 2
OR6F1 olfactory receptor, family 6, subfamily F, member 1
OR6K3 olfactory receptor, family 6, subfamily K, member 3
OR6W1P olfactory receptor, family 6, subfamily W, member 1 pseudogene
OR8G2 olfactory receptor, family 8, subfamily G, member 2
OTUD3 OTU deubiquitinase 3
PALD1 phosphatase domain containing, paladin 1
PAN3 PAN3 poly(A) specific ribonuclease subunit
PAPSS1 3'-phosphoadenosine 5'-phosphosulfate synthase 1
PATE3 prostate and testis expressed 3
PCDH7 protocadherin 7
PCDHB1 protocadherin beta 1
PDE10A phosphodiesterase 10A
PDE5A phosphodiesterase 5A, cGMP-specific
PDGFA platelet-derived growth factor alpha polypeptide
PDIK1L PDLIM1 interacting kinase 1 like
PDLIM5 PDZ and LIM domain 5
PDS5A PDS5 cohesin associated factor A
PEG3 paternally expressed 3
PEG3-AS1 PEG3 antisense RNA 1
PHACTR4 phosphatase and actin regulator 4
PHTF1 putative homeodomain transcription factor 1
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
PKN2 protein kinase N2
PKP4 plakophilin 4
PLA2G12A phospholipase A2, group XIIA
PLAGL2 pleiomorphic adenoma gene-like 2
PLCB1 phospholipase C, beta 1 (phosphoinositide-specific)
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
PLSCR4 phospholipid scramblase 4
POFUT1 protein O-fucosyltransferase 1
PPAN-P2RY11 PPAN-P2RY11 readthrough
PPAT phosphoribosyl pyrophosphate amidotransferase
PPM1L protein phosphatase, Mg2+/Mn2+ dependent, 1L
PPP1R16B protein phosphatase 1, regulatory subunit 16B
PPP1R17 protein phosphatase 1, regulatory subunit 17
PPP3CA protein phosphatase 3, catalytic subunit, alpha isozyme
PPP3R2 protein phosphatase 3, regulatory subunit B, beta
PRDM10 PR domain containing 10
PRDM11 PR domain containing 11
PRKAR2A protein kinase, cAMP-dependent, regulatory, type II, alpha
PRKCI protein kinase C, iota
PRPF38A pre-mRNA processing factor 38A
PRR30 proline rich 30
PTPRG protein tyrosine phosphatase, receptor type, G
PWWP2A PWWP domain containing 2A
RAB33B RAB33B, member RAS oncogene family
RAB41 RAB41, member RAS oncogene family
RAB43 RAB43, member RAS oncogene family
RAD54L2 RAD54-like 2 (S. cerevisiae)
RALGAPA2 Ral GTPase activating protein, alpha subunit 2 (catalytic)
RAP2A RAP2A, member of RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RAVER2 ribonucleoprotein, PTB-binding 2
RBBP4 retinoblastoma binding protein 4
RBM44 RNA binding motif protein 44
RBMXL1 RNA binding motif protein, X-linked-like 1
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RCC2 regulator of chromosome condensation 2
REEP1 receptor accessory protein 1
REG1P regenerating islet-derived 1 pseudogene
RERE arginine-glutamic acid dipeptide (RE) repeats
RESP18 regulated endocrine-specific protein 18
REST RE1-silencing transcription factor
RIMKLA ribosomal modification protein rimK-like family member A
RNF168 ring finger protein 168, E3 ubiquitin protein ligase
ROCK2 Rho-associated, coiled-coil containing protein kinase 2
ROR1 receptor tyrosine kinase-like orphan receptor 1
RPAP2 RNA polymerase II associated protein 2
RSBN1 round spermatid basic protein 1
RYBP RING1 and YY1 binding protein
RYK receptor-like tyrosine kinase
SASS6 spindle assembly 6 homolog (C. elegans)
SC5D sterol-C5-desaturase
SCMH1 sex comb on midleg homolog 1 (Drosophila)
SENP5 SUMO1/sentrin specific peptidase 5
SETD2 SET domain containing 2
SETD5 SET domain containing 5
SH3GLB1 SH3-domain GRB2-like endophilin B1
SIGLECL1 SIGLEC family like 1
SIKE1 suppressor of IKBKE 1
SIM2 single-minded family bHLH transcription factor 2
SKI SKI proto-oncogene
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC25A30 solute carrier family 25, member 30
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC35A3 solute carrier family 35 (UDP-N-acetylglucosamine (UDP-GlcNAc) transporter), member A3
SLFNL1 schlafen-like 1
SLMAP sarcolemma associated protein
SLMO2 slowmo homolog 2 (Drosophila)
SNHG4 small nucleolar RNA host gene 4
SNIP1 Smad nuclear interacting protein 1
SNORA62 small nucleolar RNA, H/ACA box 62
SNX7 sorting nexin 7
SPDYE1 speedy/RINGO cell cycle regulator family member E1
SPDYE5 speedy/RINGO cell cycle regulator family member E5
SPEN spen family transcriptional repressor
SPIN3 spindlin family, member 3
SPRED1 sprouty-related, EVH1 domain containing 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
SRSF11 serine/arginine-rich splicing factor 11
STAG1 stromal antigen 1
STIL SCL/TAL1 interrupting locus
STIM2 stromal interaction molecule 2
STK35 serine/threonine kinase 35
STX3 syntaxin 3
STXBP3 syntaxin binding protein 3
SYDE2 synapse defective 1, Rho GTPase, homolog 2 (C. elegans)
TAB3 TGF-beta activated kinase 1/MAP3K7 binding protein 3
TAPT1 transmembrane anterior posterior transformation 1
TAS1R1 taste receptor, type 1, member 1
TAS2R4 taste receptor, type 2, member 4
TAS2R50 taste receptor, type 2, member 50
TATDN2 TatD DNase domain containing 2
TBC1D1 TBC1 (tre-2/USP6, BUB2, cdc16) domain family, member 1
TBC1D20 TBC1 domain family, member 20
TBC1D4 TBC1 domain family, member 4
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
TFDP1 transcription factor Dp-1
TGFBR3 transforming growth factor, beta receptor III
TGIF2 TGFB-induced factor homeobox 2
TIGD7 tigger transposable element derived 7
TIPARP TCDD-inducible poly(ADP-ribose) polymerase
TM2D1 TM2 domain containing 1
TMCO2 transmembrane and coiled-coil domains 2
TMEM133 transmembrane protein 133
TMEM189-UBE2V1 TMEM189-UBE2V1 readthrough
TMEM204 transmembrane protein 204
TMEM65 transmembrane protein 65
TMEM80 transmembrane protein 80
TMX4 thioredoxin-related transmembrane protein 4
TOP2B topoisomerase (DNA) II beta 180kDa
TOPBP1 topoisomerase (DNA) II binding protein 1
TRIM33 tripartite motif containing 33
TRIM44 tripartite motif containing 44
TSPAN5 tetraspanin 5
TTTY4C testis-specific transcript, Y-linked 4C (non-protein coding)
TYW3 tRNA-yW synthesizing protein 3 homolog (S. cerevisiae)
UBE2K ubiquitin-conjugating enzyme E2K
UBE4A ubiquitination factor E4A
UBE4B ubiquitination factor E4B
UBTD2 ubiquitin domain containing 2
UNC13C unc-13 homolog C (C. elegans)
USP1 ubiquitin specific peptidase 1
USP24 ubiquitin specific peptidase 24
USP33 ubiquitin specific peptidase 33
USP38 ubiquitin specific peptidase 38
USP46 ubiquitin specific peptidase 46
USP48 ubiquitin specific peptidase 48
VGLL3 vestigial-like family member 3
VHL von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
VPS26B vacuolar protein sorting 26 homolog B (S. pombe)
VPS54 vacuolar protein sorting 54 homolog (S. cerevisiae)
WASF3 WAS protein family, member 3
WDFY3 WD repeat and FYVE domain containing 3
WDR47 WD repeat domain 47
WHSC1 Wolf-Hirschhorn syndrome candidate 1
WWC2 WW and C2 domain containing 2
YTHDF2 YTH N(6)-methyladenosine RNA binding protein 2
ZBTB44 zinc finger and BTB domain containing 44
ZC3H13 zinc finger CCCH-type containing 13
ZFP28 ZFP28 zinc finger protein
ZFP69 ZFP69 zinc finger protein
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZFX zinc finger protein, X-linked
ZFY zinc finger protein, Y-linked
ZFYVE9 zinc finger, FYVE domain containing 9
ZIM2 zinc finger, imprinted 2
ZMYM4 zinc finger, MYM-type 4
ZNF148 zinc finger protein 148
ZNF252P zinc finger protein 252, pseudogene
ZNF257 zinc finger protein 257
ZNF275 zinc finger protein 275
ZNF347 zinc finger protein 347
ZNF35 zinc finger protein 35
ZNF415 zinc finger protein 415
ZNF436 zinc finger protein 436
ZNF443 zinc finger protein 443
ZNF445 zinc finger protein 445
ZNF492 zinc finger protein 492
ZNF518B zinc finger protein 518B
ZNF542P zinc finger protein 542, pseudogene
ZNF566 zinc finger protein 566
ZNF595 zinc finger protein 595
ZNF621 zinc finger protein 621
ZNF644 zinc finger protein 644
ZNF662 zinc finger protein 662
ZNF665 zinc finger protein 665
ZNF670 zinc finger protein 670
ZNF679 zinc finger protein 679
ZNF681 zinc finger protein 681
ZNF702P zinc finger protein 702, pseudogene
ZNF716 zinc finger protein 716
ZNF727 zinc finger protein 727
ZNF761 zinc finger protein 761
ZNF776 zinc finger protein 776
ZNF788 zinc finger family member 788
ZNF792 zinc finger protein 792
ZNF813 zinc finger protein 813
ZNF827 zinc finger protein 827
ZNF835 zinc finger protein 835
ZNF98 zinc finger protein 98
ZNF99 zinc finger protein 99
ZNHIT6 zinc finger, HIT-type containing 6
ZNRF4 zinc and ring finger 4
ZRANB2 zinc finger, RAN-binding domain containing 2
ZSCAN12P1 zinc finger and SCAN domain containing 12 pseudogene 1
ZW10 zw10 kinetochore protein
ZYG11B zyg-11 family member B, cell cycle regulator
ZZZ3 zinc finger, ZZ-type containing 3

low expression

Symbol Name
AP2B1 adaptor-related protein complex 2, beta 1 subunit
COMMD3 COMM domain containing 3
LARP4B La ribonucleoprotein domain family, member 4B