Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GL-06A-11R-A18S-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

327 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2GL-06A-11R-A18S-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD11-AS1 ABHD11 antisense RNA 1 (tail to tail)
ACHE acetylcholinesterase (Yt blood group)
ADAM30 ADAM metallopeptidase domain 30
ADGRB1 adhesion G protein-coupled receptor B1
ADGRE3 adhesion G protein-coupled receptor E3
ADGRG5 adhesion G protein-coupled receptor G5
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AIRE autoimmune regulator
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene
AKT2 v-akt murine thymoma viral oncogene homolog 2
AMICA1 adhesion molecule, interacts with CXADR antigen 1
AP1G2 adaptor-related protein complex 1, gamma 2 subunit
AP4B1 adaptor-related protein complex 4, beta 1 subunit
AR androgen receptor
ARL5C ADP-ribosylation factor-like 5C
ARMS2 age-related maculopathy susceptibility 2
ASAP1-IT1 ASAP1 intronic transcript 1
ASB12 ankyrin repeat and SOCS box containing 12
ASGR2 asialoglycoprotein receptor 2
ASIC1 acid sensing (proton gated) ion channel 1
ATP6V1G3 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G3
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
BANK1 B-cell scaffold protein with ankyrin repeats 1
BCL11A B-cell CLL/lymphoma 11A (zinc finger protein)
BEND5 BEN domain containing 5
BTBD19 BTB (POZ) domain containing 19
C10ORF105 chromosome 10 open reading frame 105
C11ORF21 chromosome 11 open reading frame 21
C12ORF42 chromosome 12 open reading frame 42
C12ORF74 chromosome 12 open reading frame 74
C17ORF99 chromosome 17 open reading frame 99
C1ORF146 chromosome 1 open reading frame 146
C1ORF168 chromosome 1 open reading frame 168
C1ORF50 chromosome 1 open reading frame 50
C2ORF42 chromosome 2 open reading frame 42
C2ORF61 chromosome 2 open reading frame 61
C7 complement component 7
C7ORF65 chromosome 7 open reading frame 65
C7ORF72 chromosome 7 open reading frame 72
C8G complement component 8, gamma polypeptide
C8ORF48 chromosome 8 open reading frame 48
C9ORF139 chromosome 9 open reading frame 139
CACNG3 calcium channel, voltage-dependent, gamma subunit 3
CALN1 calneuron 1
CAMK4 calcium/calmodulin-dependent protein kinase IV
CAPN11 calpain 11
CASP12 caspase 12 (gene/pseudogene)
CCDC105 coiled-coil domain containing 105
CCDC23 coiled-coil domain containing 23
CCDC83 coiled-coil domain containing 83
CCL19 chemokine (C-C motif) ligand 19
CCL21 chemokine (C-C motif) ligand 21
CCNI2 cyclin I family, member 2
CCR4 chemokine (C-C motif) receptor 4
CCR6 chemokine (C-C motif) receptor 6
CD163L1 CD163 molecule-like 1
CD40LG CD40 ligand
CDH4 cadherin 4, type 1, R-cadherin (retinal)
CDK5R2 cyclin-dependent kinase 5, regulatory subunit 2 (p39)
CDX1 caudal type homeobox 1
CEACAM22P carcinoembryonic antigen-related cell adhesion molecule 22, pseudogene
CFP complement factor properdin
CGREF1 cell growth regulator with EF-hand domain 1
CHMP7 charged multivesicular body protein 7
CHST4 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 4
CLCN4 chloride channel, voltage-sensitive 4
CLEC10A C-type lectin domain family 10, member A
CLEC11A C-type lectin domain family 11, member A
CLEC17A C-type lectin domain family 17, member A
CLEC4C C-type lectin domain family 4, member C
CLU clusterin
CNIH3 cornichon family AMPA receptor auxiliary protein 3
CNR2 cannabinoid receptor 2 (macrophage)
COLGALT2 collagen beta(1-O)galactosyltransferase 2
COLQ collagen-like tail subunit (single strand of homotrimer) of asymmetric acetylcholinesterase
CPNE5 copine V
CXCR5 chemokine (C-X-C motif) receptor 5
CYLC2 cylicin, basic protein of sperm head cytoskeleton 2
DCANP1 dendritic cell-associated nuclear protein
DEFA1B defensin, alpha 1B
DEFB119 defensin, beta 119
DHRS7C dehydrogenase/reductase (SDR family) member 7C
DIEXF digestive organ expansion factor homolog (zebrafish)
DISP2 dispatched homolog 2 (Drosophila)
DKFZP434K028 uncharacterized LOC26070
DNASE1L3 deoxyribonuclease I-like 3
DPPA5 developmental pluripotency associated 5
DRD4 dopamine receptor D4
DYM dymeclin
EDA ectodysplasin A
EFCAB13 EF-hand calcium binding domain 13
EFCAB14 EF-hand calcium binding domain 14
EGFEM1P EGF-like and EMI domain containing 1, pseudogene
EGR4 early growth response 4
EPS15 epidermal growth factor receptor pathway substrate 15
ESYT3 extended synaptotagmin-like protein 3
EXOC3L4 exocyst complex component 3-like 4
EXOC6 exocyst complex component 6
FAM110B family with sequence similarity 110, member B
FAM129C family with sequence similarity 129, member C
FAM138E family with sequence similarity 138, member E
FAM151A family with sequence similarity 151, member A
FAM155B family with sequence similarity 155, member B
FAM175A family with sequence similarity 175, member A
FAM212A family with sequence similarity 212, member A
FAM216B family with sequence similarity 216, member B
FAM223B family with sequence similarity 223, member B (non-protein coding)
FAM65B family with sequence similarity 65, member B
FBXL16 F-box and leucine-rich repeat protein 16
FBXO41 F-box protein 41
FCAMR Fc receptor, IgA, IgM, high affinity
FCER1A Fc fragment of IgE, high affinity I, receptor for; alpha polypeptide
FGF6 fibroblast growth factor 6
FLT3 fms-related tyrosine kinase 3
FOXD4L3 forkhead box D4-like 3
FOXD4L6 forkhead box D4-like 6
FOXJ3 forkhead box J3
FOXR1 forkhead box R1
FUT7 fucosyltransferase 7 (alpha (1,3) fucosyltransferase)
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3
GAPT GRB2-binding adaptor protein, transmembrane
GDAP1 ganglioside induced differentiation associated protein 1
GIF gastric intrinsic factor (vitamin B synthesis)
GLIPR2 GLI pathogenesis-related 2
GP1BA glycoprotein Ib (platelet), alpha polypeptide
GPA33 glycoprotein A33 (transmembrane)
GPBP1L1 GC-rich promoter binding protein 1-like 1
GPR142 G protein-coupled receptor 142
GPR148 G protein-coupled receptor 148
GPR15 G protein-coupled receptor 15
GPR18 G protein-coupled receptor 18
GPR182 G protein-coupled receptor 182
GPR32 G protein-coupled receptor 32
GPR55 G protein-coupled receptor 55
GPR6 G protein-coupled receptor 6
GRID1 glutamate receptor, ionotropic, delta 1
GSTTP2 glutathione S-transferase theta pseudogene 2
GUCA1B guanylate cyclase activator 1B (retina)
HECTD3 HECT domain containing E3 ubiquitin protein ligase 3
HPDL 4-hydroxyphenylpyruvate dioxygenase-like
HYI hydroxypyruvate isomerase (putative)
ICA1 islet cell autoantigen 1, 69kDa
IDO2 indoleamine 2,3-dioxygenase 2
IFNA5 interferon, alpha 5
IKBKE inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase epsilon
IL17REL interleukin 17 receptor E-like
IL18R1 interleukin 18 receptor 1
IL27RA interleukin 27 receptor, alpha
IPP intracisternal A particle-promoted polypeptide
IRF8 interferon regulatory factor 8
IRX5 iroquois homeobox 5
ITIH1 inter-alpha-trypsin inhibitor heavy chain 1
KCNC3 potassium channel, voltage gated Shaw related subfamily C, member 3
KCNS2 potassium voltage-gated channel, modifier subfamily S, member 2
KDM4A lysine (K)-specific demethylase 4A
KLF17 Kruppel-like factor 17
KLHL33 kelch-like family member 33
KNDC1 kinase non-catalytic C-lobe domain (KIND) containing 1
LDB3 LIM domain binding 3
LENG9 leukocyte receptor cluster (LRC) member 9
LGALS2 lectin, galactoside-binding, soluble, 2
LGALS4 lectin, galactoside-binding, soluble, 4
LILRA4 leukocyte immunoglobulin-like receptor, subfamily A (with TM domain), member 4
LINC00336 long intergenic non-protein coding RNA 336
LINC00341 long intergenic non-protein coding RNA 341
LINC00574 long intergenic non-protein coding RNA 574
LINGO3 leucine rich repeat and Ig domain containing 3
LIPT1 lipoyltransferase 1
LRRC16B leucine rich repeat containing 16B
LRRC30 leucine rich repeat containing 30
LRRC41 leucine rich repeat containing 41
LTA lymphotoxin alpha
LTB lymphotoxin beta (TNF superfamily, member 3)
LTBP4 latent transforming growth factor beta binding protein 4
LURAP1 leucine rich adaptor protein 1
MAP1LC3C microtubule-associated protein 1 light chain 3 gamma
MAST2 microtubule associated serine/threonine kinase 2
MATK megakaryocyte-associated tyrosine kinase
MCOLN3 mucolipin 3
MLN motilin
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
MMP23B matrix metallopeptidase 23B
MPEG1 macrophage expressed 1
MRPL42P5 mitochondrial ribosomal protein L42 pseudogene 5
MUTYH mutY homolog
MYCL v-myc avian myelocytomatosis viral oncogene lung carcinoma derived homolog
NAPSB napsin B aspartic peptidase, pseudogene
NCR2 natural cytotoxicity triggering receptor 2
NCR3 natural cytotoxicity triggering receptor 3
NFASC neurofascin
NLRP13 NLR family, pyrin domain containing 13
NPHS1 nephrosis 1, congenital, Finnish type (nephrin)
NRD1 nardilysin (N-arginine dibasic convertase)
NSUN4 NOP2/Sun domain family, member 4
ODF4 outer dense fiber of sperm tails 4
OLFML3 olfactomedin-like 3
OPN1MW opsin 1 (cone pigments), medium-wave-sensitive
OR10H3 olfactory receptor, family 10, subfamily H, member 3
OR10K1 olfactory receptor, family 10, subfamily K, member 1
OR12D3 olfactory receptor, family 12, subfamily D, member 3
OR1A1 olfactory receptor, family 1, subfamily A, member 1
OR1D2 olfactory receptor, family 1, subfamily D, member 2
OR1K1 olfactory receptor, family 1, subfamily K, member 1
OR1N2 olfactory receptor, family 1, subfamily N, member 2
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR2G2 olfactory receptor, family 2, subfamily G, member 2
OR2G3 olfactory receptor, family 2, subfamily G, member 3
OR2T5 olfactory receptor, family 2, subfamily T, member 5
OR2Z1 olfactory receptor, family 2, subfamily Z, member 1
OR51L1 olfactory receptor, family 51, subfamily L, member 1
OR52N2 olfactory receptor, family 52, subfamily N, member 2
OR5B12 olfactory receptor, family 5, subfamily B, member 12
OR5C1 olfactory receptor, family 5, subfamily C, member 1
OR6C75 olfactory receptor, family 6, subfamily C, member 75
OR6S1 olfactory receptor, family 6, subfamily S, member 1
OR7C2 olfactory receptor, family 7, subfamily C, member 2
OR7D4 olfactory receptor, family 7, subfamily D, member 4
P2RX2 purinergic receptor P2X, ligand gated ion channel, 2
PACSIN1 protein kinase C and casein kinase substrate in neurons 1
PATE3 prostate and testis expressed 3
PCDH11X protocadherin 11 X-linked
PCDHA10 protocadherin alpha 10
PCDHA6 protocadherin alpha 6
PCDHAC1 protocadherin alpha subfamily C, 1
PCDHAC2 protocadherin alpha subfamily C, 2
PCDHGA7 protocadherin gamma subfamily A, 7
PDLIM2 PDZ and LIM domain 2 (mystique)
PGLYRP1 peptidoglycan recognition protein 1
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PIK3C2B phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 beta
PLAC8 placenta-specific 8
PLCG2 phospholipase C, gamma 2 (phosphatidylinositol-specific)
PLD4 phospholipase D family, member 4
PLK3 polo-like kinase 3
POM121L9P POM121 transmembrane nucleoporin-like 9, pseudogene
PPM1J protein phosphatase, Mg2+/Mn2+ dependent, 1J
PRCD progressive rod-cone degeneration
PRG3 proteoglycan 3
PRKCB protein kinase C, beta
PROC protein C (inactivator of coagulation factors Va and VIIIa)
PRTN3 proteinase 3
PSCA prostate stem cell antigen
PSMB11 proteasome (prosome, macropain) subunit, beta type, 11
RBP3 retinol binding protein 3, interstitial
RBP5 retinol binding protein 5, cellular
REG1P regenerating islet-derived 1 pseudogene
RELL2 RELT-like 2
RGMB repulsive guidance molecule family member b
RPL13A ribosomal protein L13a
RPS8 ribosomal protein S8
RSBN1 round spermatid basic protein 1
RUNDC3A RUN domain containing 3A
RXFP4 relaxin/insulin-like family peptide receptor 4
S100A4 S100 calcium binding protein A4
S1PR1 sphingosine-1-phosphate receptor 1
SARS seryl-tRNA synthetase
SCT secretin
SERPINA9 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 9
SHANK1 SH3 and multiple ankyrin repeat domains 1
SHISA7 shisa family member 7
SLC12A3 solute carrier family 12 (sodium/chloride transporter), member 3
SLC17A2 solute carrier family 17, member 2
SLC22A24 solute carrier family 22, member 24
SLC22A3 solute carrier family 22 (organic cation transporter), member 3
SNAP91 synaptosomal-associated protein, 91kDa
SNORA16B small nucleolar RNA, H/ACA box 16B
SNORA45B small nucleolar RNA, H/ACA box 45B
SNORA56 small nucleolar RNA, H/ACA box 56
SNORA72 small nucleolar RNA, H/ACA box 72
SNRNP70 small nuclear ribonucleoprotein 70kDa (U1)
SOX14 SRY (sex determining region Y)-box 14
SPATA6 spermatogenesis associated 6
SPATS1 spermatogenesis associated, serine-rich 1
SPIB Spi-B transcription factor (Spi-1/PU.1 related)
SPINK8 serine peptidase inhibitor, Kazal type 8 (putative)
SPNS3 spinster homolog 3 (Drosophila)
SSTR3 somatostatin receptor 3
STAB2 stabilin 2
SVEP1 sushi, von Willebrand factor type A, EGF and pentraxin domain containing 1
SYN1 synapsin I
SYT14 synaptotagmin XIV
SYT15 synaptotagmin XV
SYT6 synaptotagmin VI
T T, brachyury homolog (mouse)
TAS2R46 taste receptor, type 2, member 46
TBX10 T-box 10
TCL1B T-cell leukemia/lymphoma 1B
TDRD3 tudor domain containing 3
TESK2 testis-specific kinase 2
TEX15 testis expressed 15
THAP1 THAP domain containing, apoptosis associated protein 1
TIFAB TRAF-interacting protein with forkhead-associated domain, family member B
TLR10 toll-like receptor 10
TLR9 toll-like receptor 9
TMIGD2 transmembrane and immunoglobulin domain containing 2
TMOD4 tropomodulin 4 (muscle)
TNFRSF13C tumor necrosis factor receptor superfamily, member 13C
TNFRSF25 tumor necrosis factor receptor superfamily, member 25
TNFSF11 tumor necrosis factor (ligand) superfamily, member 11
TNNT1 troponin T type 1 (skeletal, slow)
TOE1 target of EGR1, member 1 (nuclear)
TREML2 triggering receptor expressed on myeloid cells-like 2
TRPM4 transient receptor potential cation channel, subfamily M, member 4
TSEN15 TSEN15 tRNA splicing endonuclease subunit
TTC9 tetratricopeptide repeat domain 9
UNC13A unc-13 homolog A (C. elegans)
UNC79 unc-79 homolog (C. elegans)
UROD uroporphyrinogen decarboxylase
USP44 ubiquitin specific peptidase 44
VENTXP7 VENT homeobox pseudogene 7
VPS26A vacuolar protein sorting 26 homolog A (S. pombe)
VRTN vertebrae development associated
VSTM2B V-set and transmembrane domain containing 2B
WDR47 WD repeat domain 47
WDR63 WD repeat domain 63
WFDC10A WAP four-disulfide core domain 10A
XKR6 XK, Kell blood group complex subunit-related family, member 6
YBX1 Y box binding protein 1
ZCCHC13 zinc finger, CCHC domain containing 13
ZFAT-AS1 ZFAT antisense RNA 1
ZFR2 zinc finger RNA binding protein 2
ZMYND12 zinc finger, MYND-type containing 12
ZNF277 zinc finger protein 277
ZNF438 zinc finger protein 438
ZNHIT6 zinc finger, HIT-type containing 6
ZNRF4 zinc and ring finger 4

low expression

Symbol Name
MAGEF1 melanoma antigen family F1