Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2A5-06A-11R-A18T-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

448 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A2A5-06A-11R-A18T-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABAT 4-aminobutyrate aminotransferase
ABCA11P ATP-binding cassette, sub-family A (ABC1), member 11, pseudogene
ACSS1 acyl-CoA synthetase short-chain family member 1
ACVR2A activin A receptor, type IIA
ADAM12 ADAM metallopeptidase domain 12
ADAMTS5 ADAM metallopeptidase with thrombospondin type 1 motif, 5
ADGRB3 adhesion G protein-coupled receptor B3
ADGRL2 adhesion G protein-coupled receptor L2
ADRBK2 adrenergic, beta, receptor kinase 2
ALDH1A1 aldehyde dehydrogenase 1 family, member A1
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALOX15 arachidonate 15-lipoxygenase
APOC1 apolipoprotein C-I
APPL2 adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 2
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARHGAP28 Rho GTPase activating protein 28
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARID1B AT rich interactive domain 1B (SWI1-like)
ARID3A AT rich interactive domain 3A (BRIGHT-like)
ARID5B AT rich interactive domain 5B (MRF1-like)
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASIC4 acid sensing (proton gated) ion channel family member 4
ATAD2 ATPase family, AAA domain containing 2
ATF7IP2 activating transcription factor 7 interacting protein 2
ATP5O ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
BAIAP3 BAI1-associated protein 3
BFAR bifunctional apoptosis regulator
BIVM basic, immunoglobulin-like variable motif containing
BORA bora, aurora kinase A activator
BTBD3 BTB (POZ) domain containing 3
C16ORF62 chromosome 16 open reading frame 62
C16ORF90 chromosome 16 open reading frame 90
C19ORF18 chromosome 19 open reading frame 18
C2CD5 C2 calcium-dependent domain containing 5
C2ORF88 chromosome 2 open reading frame 88
C3ORF52 chromosome 3 open reading frame 52
C8ORF37 chromosome 8 open reading frame 37
C8ORF44 chromosome 8 open reading frame 44
CASKIN1 CASK interacting protein 1
CBLN2 cerebellin 2 precursor
CBX5 chromobox homolog 5
CCDC122 coiled-coil domain containing 122
CCDC50 coiled-coil domain containing 50
CCDC77 coiled-coil domain containing 77
CCNF cyclin F
CCP110 centriolar coiled coil protein 110kDa
CCT8 chaperonin containing TCP1, subunit 8 (theta)
CDC25C cell division cycle 25C
CDK8 cyclin-dependent kinase 8
CDR2 cerebellar degeneration-related protein 2, 62kDa
CHD7 chromodomain helicase DNA binding protein 7
CHRNA3 cholinergic receptor, nicotinic, alpha 3 (neuronal)
CKAP2 cytoskeleton associated protein 2
CLUAP1 clusterin associated protein 1
CNRIP1 cannabinoid receptor interacting protein 1
COG7 component of oligomeric golgi complex 7
COL24A1 collagen, type XXIV, alpha 1
COL25A1 collagen, type XXV, alpha 1
COQ7 coenzyme Q7 homolog, ubiquinone (yeast)
CRAMP1L Crm, cramped-like (Drosophila)
CREBBP CREB binding protein
CRISPLD1 cysteine-rich secretory protein LCCL domain containing 1
CRTAC1 cartilage acidic protein 1
CSPP1 centrosome and spindle pole associated protein 1
CYP26A1 cytochrome P450, family 26, subfamily A, polypeptide 1
CYP7B1 cytochrome P450, family 7, subfamily B, polypeptide 1
DAAM2 dishevelled associated activator of morphogenesis 2
DCLK2 doublecortin-like kinase 2
DCP1B decapping mRNA 1B
DCTN5 dynactin 5 (p25)
DCTPP1 dCTP pyrophosphatase 1
DDAH1 dimethylarginine dimethylaminohydrolase 1
DHFR dihydrofolate reductase
DIXDC1 DIX domain containing 1
DLX2 distal-less homeobox 2
DMRTA1 DMRT-like family A1
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNMT3B DNA (cytosine-5-)-methyltransferase 3 beta
DPYSL3 dihydropyrimidinase-like 3
DZIP1 DAZ interacting zinc finger protein 1
E2F5 E2F transcription factor 5, p130-binding
EARS2 glutamyl-tRNA synthetase 2, mitochondrial
ECI1 enoyl-CoA delta isomerase 1
EEF2K eukaryotic elongation factor 2 kinase
EFNA5 ephrin-A5
EHMT1 euchromatic histone-lysine N-methyltransferase 1
EIF3E eukaryotic translation initiation factor 3, subunit E
EIF3H eukaryotic translation initiation factor 3, subunit H
EIF4E1B eukaryotic translation initiation factor 4E family member 1B
EMP2 epithelial membrane protein 2
EPHA3 EPH receptor A3
EPHB3 EPH receptor B3
EPS8 epidermal growth factor receptor pathway substrate 8
ESD esterase D
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EXOC3L2 exocyst complex component 3-like 2
EXT1 exostosin glycosyltransferase 1
FAM167A-AS1 FAM167A antisense RNA 1
FAR2 fatty acyl CoA reductase 2
FARP1 FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived)
FAT4 FAT atypical cadherin 4
FAXDC2 fatty acid hydroxylase domain containing 2
FBN2 fibrillin 2
FBXL19 F-box and leucine-rich repeat protein 19
FEZF2 FEZ family zinc finger 2
FIGLA folliculogenesis specific basic helix-loop-helix
FIGNL2 fidgetin-like 2
FKBP10 FK506 binding protein 10, 65 kDa
FKBP5 FK506 binding protein 5
FKBP7 FK506 binding protein 7
FNDC5 fibronectin type III domain containing 5
FOPNL FGFR1OP N-terminal like
FOXO1 forkhead box O1
FREM1 FRAS1 related extracellular matrix 1
GARNL3 GTPase activating Rap/RanGAP domain-like 3
GATA5 GATA binding protein 5
GFER growth factor, augmenter of liver regeneration
GFRAL GDNF family receptor alpha like
GGA2 golgi-associated, gamma adaptin ear containing, ARF binding protein 2
GLYR1 glyoxylate reductase 1 homolog (Arabidopsis)
GPATCH1 G patch domain containing 1
GPC4 glypican 4
GPR20 G protein-coupled receptor 20
GPRC5B G protein-coupled receptor, class C, group 5, member B
GREM2 gremlin 2, DAN family BMP antagonist
GRTP1 growth hormone regulated TBC protein 1
GUSBP2 glucuronidase, beta pseudogene 2
GUSBP3 glucuronidase, beta pseudogene 3
H1FX-AS1 H1FX antisense RNA 1
HDAC5 histone deacetylase 5
HIRIP3 HIRA interacting protein 3
HIST1H2BB histone cluster 1, H2bb
HN1L hematological and neurological expressed 1-like
HNRNPA1L2 heterogeneous nuclear ribonucleoprotein A1-like 2
HOXB13 homeobox B13
HPSE heparanase
HRC histidine rich calcium binding protein
HS3ST5 heparan sulfate (glucosamine) 3-O-sulfotransferase 5
HTR1A 5-hydroxytryptamine (serotonin) receptor 1A, G protein-coupled
HUNK hormonally up-regulated Neu-associated kinase
IFT140 intraflagellar transport 140
IFT88 intraflagellar transport 88
IGDCC3 immunoglobulin superfamily, DCC subclass, member 3
IL11RA interleukin 11 receptor, alpha
IL17RD interleukin 17 receptor D
ILF3 interleukin enhancer binding factor 3, 90kDa
ING4 inhibitor of growth family, member 4
INS-IGF2 INS-IGF2 readthrough
IPO5 importin 5
IQCK IQ motif containing K
ITGB5 integrin, beta 5
ITM2C integral membrane protein 2C
ITSN1 intersectin 1 (SH3 domain protein)
JPH1 junctophilin 1
JRK Jrk homolog (mouse)
KAT8 K(lysine) acetyltransferase 8
KCNK2 potassium channel, two pore domain subfamily K, member 2
KDELC1 KDEL (Lys-Asp-Glu-Leu) containing 1
KDM8 lysine (K)-specific demethylase 8
KIAA0196 KIAA0196
KIAA0430 KIAA0430
KIAA1429 KIAA1429
KIF15 kinesin family member 15
KIF20A kinesin family member 20A
KIF21A kinesin family member 21A
KIF22 kinesin family member 22
KIF24 kinesin family member 24
KLF12 Kruppel-like factor 12
KNOP1 lysine-rich nucleolar protein 1
LAPTM4B lysosomal protein transmembrane 4 beta
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LECT1 leukocyte cell derived chemotaxin 1
LHFP lipoma HMGIC fusion partner
LIN28A lin-28 homolog A (C. elegans)
LINC00310 long intergenic non-protein coding RNA 310
LINC00483 long intergenic non-protein coding RNA 483
LINC01599 long intergenic non-protein coding RNA 1599
LMNB1 lamin B1
LMO4 LIM domain only 4
LOC100190986 uncharacterized LOC100190986
LOC221122 uncharacterized LOC221122
LOC286367
LOC389332 uncharacterized LOC389332
LRCH1 leucine-rich repeats and calponin homology (CH) domain containing 1
LRRC1 leucine rich repeat containing 1
LRRC19 leucine rich repeat containing 19
LRRCC1 leucine rich repeat and coiled-coil centrosomal protein 1
LRRN3 leucine rich repeat neuronal 3
LSAMP limbic system-associated membrane protein
LUZP2 leucine zipper protein 2
MAMDC2 MAM domain containing 2
MAML2 mastermind-like 2 (Drosophila)
MAMSTR MEF2 activating motif and SAP domain containing transcriptional regulator
MAP2 microtubule-associated protein 2
MAPK15 mitogen-activated protein kinase 15
MAPRE2 microtubule-associated protein, RP/EB family, member 2
MAZ MYC-associated zinc finger protein (purine-binding transcription factor)
MBTD1 mbt domain containing 1
MCM3AP-AS1 MCM3AP antisense RNA 1
MCM4 minichromosome maintenance complex component 4
MDC1 mediator of DNA-damage checkpoint 1
MEF2C myocyte enhancer factor 2C
MEIS3 Meis homeobox 3
MEOX2 mesenchyme homeobox 2
METRN meteorin, glial cell differentiation regulator
METTL22 methyltransferase like 22
MIR600HG MIR600 host gene
MKL2 MKL/myocardin-like 2
MORN1 MORN repeat containing 1
MPP4 membrane protein, palmitoylated 4 (MAGUK p55 subfamily member 4)
MS4A13 membrane-spanning 4-domains, subfamily A, member 13
MSTN myostatin
MTBP MDM2 binding protein
MYLIP myosin regulatory light chain interacting protein
MYO3A myosin IIIA
MYOZ1 myozenin 1
MYPN myopalladin
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative)
NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit
NAIP NLR family, apoptosis inhibitory protein
NAV1 neuron navigator 1
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NCAPD2 non-SMC condensin I complex, subunit D2
NEK3 NIMA-related kinase 3
NELL2 NEL-like 2 (chicken)
NFATC2IP nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 2 interacting protein
NFIB nuclear factor I/B
NHLRC4 NHL repeat containing 4
NIPSNAP3B nipsnap homolog 3B (C. elegans)
NOXO1 NADPH oxidase organizer 1
NPAS3 neuronal PAS domain protein 3
NPPA natriuretic peptide A
NR2F1 nuclear receptor subfamily 2, group F, member 1
NRARP NOTCH-regulated ankyrin repeat protein
NRIP1 nuclear receptor interacting protein 1
NSMCE1 non-SMC element 1 homolog (S. cerevisiae)
NSMCE2 non-SMC element 2, MMS21 homolog (S. cerevisiae)
NTN3 netrin 3
NTS neurotensin
NUDCD1 NudC domain containing 1
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
NXNL2 nucleoredoxin-like 2
NYNRIN NYN domain and retroviral integrase containing
OIT3 oncoprotein induced transcript 3
OR10A2 olfactory receptor, family 10, subfamily A, member 2
OR2C1 olfactory receptor, family 2, subfamily C, member 1
OR6K2 olfactory receptor, family 6, subfamily K, member 2
OR9Q1 olfactory receptor, family 9, subfamily Q, member 1
OSR2 odd-skipped related transciption factor 2
OXR1 oxidation resistance 1
PABPC1 poly(A) binding protein, cytoplasmic 1
PAGR1 PAXIP1 associated glutamate-rich protein 1
PALB2 partner and localizer of BRCA2
PCDHGA10 protocadherin gamma subfamily A, 10
PDPK1 3-phosphoinositide dependent protein kinase 1
PDS5B PDS5 cohesin associated factor B
PDXDC1 pyridoxal-dependent decarboxylase domain containing 1
PEG3-AS1 PEG3 antisense RNA 1
PEX2 peroxisomal biogenesis factor 2
PHC1 polyhomeotic homolog 1 (Drosophila)
PHF20 PHD finger protein 20
PHLDB2 pleckstrin homology-like domain, family B, member 2
PIBF1 progesterone immunomodulatory binding factor 1
PIEZO2 piezo-type mechanosensitive ion channel component 2
PLCB4 phospholipase C, beta 4
PLCG1 phospholipase C, gamma 1
PLK1 polo-like kinase 1
POLR1E polymerase (RNA) I polypeptide E, 53kDa
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
POSTN periostin, osteoblast specific factor
PPP1R13B protein phosphatase 1, regulatory subunit 13B
PRDM8 PR domain containing 8
PREX2 phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2
PRKCI protein kinase C, iota
PRKDC protein kinase, DNA-activated, catalytic polypeptide
PRM3 protamine 3
PROSER1 proline and serine rich 1
PSD3 pleckstrin and Sec7 domain containing 3
PTCH1 patched 1
PTDSS1 phosphatidylserine synthase 1
PTK2 protein tyrosine kinase 2
PTPRO protein tyrosine phosphatase, receptor type, O
PYGM phosphorylase, glycogen, muscle
RAB11FIP3 RAB11 family interacting protein 3 (class II)
RAB26 RAB26, member RAS oncogene family
RAD21 RAD21 homolog (S. pombe)
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RARB retinoic acid receptor, beta
RASA3 RAS p21 protein activator 3
RBBP6 retinoblastoma binding protein 6
RBFOX2 RNA binding protein, fox-1 homolog (C. elegans) 2
RCBTB2 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 2
RD3 retinal degeneration 3
RERE arginine-glutamic acid dipeptide (RE) repeats
RHOBTB1 Rho-related BTB domain containing 1
RIPPLY3 ripply transcriptional repressor 3
RMDN1 regulator of microtubule dynamics 1
RMI1 RecQ mediated genome instability 1
RMI2 RecQ mediated genome instability 2
RND2 Rho family GTPase 2
RNF219 ring finger protein 219
RNF40 ring finger protein 40, E3 ubiquitin protein ligase
RNPS1 RNA binding protein S1, serine-rich domain
RPS15A ribosomal protein S15a
RRN3 RRN3 RNA polymerase I transcription factor homolog (S. cerevisiae)
RRN3P3 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 3
RSL1D1 ribosomal L1 domain containing 1
RTN2 reticulon 2
S1PR3 sphingosine-1-phosphate receptor 3
SALL4 spalt-like transcription factor 4
SBK1 SH3 domain binding kinase 1
SCN4A sodium channel, voltage gated, type IV alpha subunit
SDC2 syndecan 2
SETD1A SET domain containing 1A
SGK3 serum/glucocorticoid regulated kinase family, member 3
SHC3 SHC (Src homology 2 domain containing) transforming protein 3
SHROOM3 shroom family member 3
SKA3 spindle and kinetochore associated complex subunit 3
SLC10A7 solute carrier family 10, member 7
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SLC35E2 solute carrier family 35, member E2
SLIT2 slit homolog 2 (Drosophila)
SLITRK1 SLIT and NTRK-like family, member 1
SMARCC1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily c, member 1
SOX5 SRY (sex determining region Y)-box 5
SPIDR scaffolding protein involved in DNA repair
SPNS1 spinster homolog 1 (Drosophila)
SPRY2 sprouty homolog 2 (Drosophila)
SPSB4 splA/ryanodine receptor domain and SOCS box containing 4
SRCAP Snf2-related CREBBP activator protein
SRGAP3 SLIT-ROBO Rho GTPase activating protein 3
SRRM2 serine/arginine repetitive matrix 2
SSBP2 single-stranded DNA binding protein 2
SSBP3 single stranded DNA binding protein 3
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
STARD8 StAR-related lipid transfer (START) domain containing 8
STAU2 staufen double-stranded RNA binding protein 2
STIM2 stromal interaction molecule 2
STK24 serine/threonine kinase 24
STMN2 stathmin 2
STON1 stonin 1
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
TAS1R1 taste receptor, type 1, member 1
TAS2R46 taste receptor, type 2, member 46
TBC1D24 TBC1 domain family, member 24
TBC1D29 TBC1 domain family, member 29
TBC1D31 TBC1 domain family, member 31
TBC1D4 TBC1 domain family, member 4
TBX2 T-box 2
TCF7L1 transcription factor 7-like 1 (T-cell specific, HMG-box)
TEAD2 TEA domain family member 2
TFAP4 transcription factor AP-4 (activating enhancer binding protein 4)
THUMPD1 THUMP domain containing 1
TLE4 transducin-like enhancer of split 4
TMEM204 transmembrane protein 204
TMEM240 transmembrane protein 240
TMEM72 transmembrane protein 72
TMTC4 transmembrane and tetratricopeptide repeat containing 4
TNRC6A trinucleotide repeat containing 6A
TRAF7 TNF receptor-associated factor 7, E3 ubiquitin protein ligase
TRAP1 TNF receptor-associated protein 1
TRIM13 tripartite motif containing 13
TRIM71 tripartite motif containing 71, E3 ubiquitin protein ligase
TRPC4 transient receptor potential cation channel, subfamily C, member 4
TSC1 tuberous sclerosis 1
TSC2 tuberous sclerosis 2
TSGA10 testis specific, 10
TSHZ1 teashirt zinc finger homeobox 1
TTC27 tetratricopeptide repeat domain 27
TTC28 tetratricopeptide repeat domain 28
TTLL6 tubulin tyrosine ligase-like family member 6
TTLL8 tubulin tyrosine ligase-like family member 8
UBE2I ubiquitin-conjugating enzyme E2I
UBFD1 ubiquitin family domain containing 1
UBXN2B UBX domain protein 2B
UNC5C unc-5 homolog C (C. elegans)
UNKL unkempt family zinc finger-like
UQCRC2 ubiquinol-cytochrome c reductase core protein II
USP49 ubiquitin specific peptidase 49
USP7 ubiquitin specific peptidase 7 (herpes virus-associated)
USPL1 ubiquitin specific peptidase like 1
VPS13B vacuolar protein sorting 13 homolog B (yeast)
WDR90 WD repeat domain 90
WFIKKN1 WAP, follistatin/kazal, immunoglobulin, kunitz and netrin domain containing 1
XYLT1 xylosyltransferase I
ZBTB10 zinc finger and BTB domain containing 10
ZCCHC3 zinc finger, CCHC domain containing 3
ZFP30 ZFP30 zinc finger protein
ZFP91-CNTF ZFP91-CNTF readthrough (NMD candidate)
ZHX3 zinc fingers and homeoboxes 3
ZKSCAN2 zinc finger with KRAB and SCAN domains 2
ZNF16 zinc finger protein 16
ZNF174 zinc finger protein 174
ZNF200 zinc finger protein 200
ZNF208 zinc finger protein 208
ZNF250 zinc finger protein 250
ZNF251 zinc finger protein 251
ZNF253 zinc finger protein 253
ZNF257 zinc finger protein 257
ZNF260 zinc finger protein 260
ZNF263 zinc finger protein 263
ZNF286A zinc finger protein 286A
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF384 zinc finger protein 384
ZNF420 zinc finger protein 420
ZNF43 zinc finger protein 43
ZNF483 zinc finger protein 483
ZNF486 zinc finger protein 486
ZNF492 zinc finger protein 492
ZNF500 zinc finger protein 500
ZNF517 zinc finger protein 517
ZNF546 zinc finger protein 546
ZNF566 zinc finger protein 566
ZNF606 zinc finger protein 606
ZNF607 zinc finger protein 607
ZNF618 zinc finger protein 618
ZNF623 zinc finger protein 623
ZNF626 zinc finger protein 626
ZNF627 zinc finger protein 627
ZNF629 zinc finger protein 629
ZNF646 zinc finger protein 646
ZNF658 zinc finger protein 658
ZNF7 zinc finger protein 7
ZNF704 zinc finger protein 704
ZNF709 zinc finger protein 709
ZNF718 zinc finger protein 718
ZNF720 zinc finger protein 720
ZNF727 zinc finger protein 727
ZNF732 zinc finger protein 732
ZNF738 zinc finger protein 738
ZNF764 zinc finger protein 764
ZNF768 zinc finger protein 768
ZNF781 zinc finger protein 781
ZNF782 zinc finger protein 782
ZNF785 zinc finger protein 785
ZNF790 zinc finger protein 790
ZNF813 zinc finger protein 813
ZNF826P zinc finger protein 826, pseudogene
ZNF91 zinc finger protein 91
ZNF98 zinc finger protein 98
ZSCAN1 zinc finger and SCAN domain containing 1
ZSCAN32 zinc finger and SCAN domain containing 32

low expression

Symbol Name
BRD7 bromodomain containing 7