Skin Cutaneous Melanoma_SKCM_TCGA-EE-A184-06A-11R-A18S-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

377 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EE-A184-06A-11R-A18S-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABHD15 abhydrolase domain containing 15
ABHD16B abhydrolase domain containing 16B
ABL2 ABL proto-oncogene 2, non-receptor tyrosine kinase
ACTL7A actin-like 7A
ADD1 adducin 1 (alpha)
ADGRE2 adhesion G protein-coupled receptor E2
ADPRHL1 ADP-ribosylhydrolase like 1
ADSS adenylosuccinate synthase
AGPAT3 1-acylglycerol-3-phosphate O-acyltransferase 3
AIFM3 apoptosis-inducing factor, mitochondrion-associated, 3
ALDH9A1 aldehyde dehydrogenase 9 family, member A1
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALMS1P Alstrom syndrome 1 pseudogene
ANK2 ankyrin 2, neuronal
ANXA3 annexin A3
ARPP21 cAMP-regulated phosphoprotein, 21kDa
ARSG arylsulfatase G
ATOH1 atonal homolog 1 (Drosophila)
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1
B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group)
B3GALTL beta 1,3-galactosyltransferase-like
B4GALT5 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 5
BAHCC1 BAH domain and coiled-coil containing 1
BFAR bifunctional apoptosis regulator
BPIFA1 BPI fold containing family A, member 1
C15ORF56 chromosome 15 open reading frame 56
C1ORF204 chromosome 1 open reading frame 204
C1ORF226 chromosome 1 open reading frame 226
C20ORF144 chromosome 20 open reading frame 144
C22ORF23 chromosome 22 open reading frame 23
C22ORF29 chromosome 22 open reading frame 29
C22ORF46 chromosome 22 open reading frame 46
CAND2 cullin-associated and neddylation-dissociated 2 (putative)
CBX6 chromobox homolog 6
CCDC169 coiled-coil domain containing 169
CCDC71 coiled-coil domain containing 71
CCDC78 coiled-coil domain containing 78
CCNI cyclin I
CCSER1 coiled-coil serine-rich protein 1
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CDC42BPG CDC42 binding protein kinase gamma (DMPK-like)
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDH9 cadherin 9, type 2 (T1-cadherin)
CDKN1C cyclin-dependent kinase inhibitor 1C (p57, Kip2)
CDPF1 cysteine-rich, DPF motif domain containing 1
CDS1 CDP-diacylglycerol synthase (phosphatidate cytidylyltransferase) 1
CELSR1 cadherin, EGF LAG seven-pass G-type receptor 1
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2
CEP250 centrosomal protein 250kDa
CERK ceramide kinase
CHAF1B chromatin assembly factor 1, subunit B (p60)
CLDN1 claudin 1
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
CNTN1 contactin 1
COCH cochlin
CPN1 carboxypeptidase N, polypeptide 1
CPOX coproporphyrinogen oxidase
CRKL v-crk avian sarcoma virus CT10 oncogene homolog-like
CRX cone-rod homeobox
CSTF1 cleavage stimulation factor, 3' pre-RNA, subunit 1, 50kDa
CTBP1-AS2 CTBP1 antisense RNA 2 (head to head)
CUL4A cullin 4A
CX3CL1 chemokine (C-X3-C motif) ligand 1
CXADR coxsackie virus and adenovirus receptor
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DAB2 Dab, mitogen-responsive phosphoprotein, homolog 2 (Drosophila)
DACH1 dachshund family transcription factor 1
DAG1 dystroglycan 1 (dystrophin-associated glycoprotein 1)
DALRD3 DALR anticodon binding domain containing 3
DBNDD2 dysbindin (dystrobrevin binding protein 1) domain containing 2
DCAF7 DDB1 and CUL4 associated factor 7
DCLK1 doublecortin-like kinase 1
DCUN1D2 DCN1, defective in cullin neddylation 1, domain containing 2
DENND4B DENN/MADD domain containing 4B
DEPDC5 DEP domain containing 5
DIRC2 disrupted in renal carcinoma 2
DNAI1 dynein, axonemal, intermediate chain 1
DNAJA4 DnaJ (Hsp40) homolog, subfamily A, member 4
DNM1P35 dynamin 1 pseudogene 35
DPH3P1 diphthamide biosynthesis 3 pseudogene 1
DROSHA drosha, ribonuclease type III
DSCR3 Down syndrome critical region 3
DTNA dystrobrevin, alpha
DUSP3 dual specificity phosphatase 3
DUSP8 dual specificity phosphatase 8
DYNLL2 dynein, light chain, LC8-type 2
EGF epidermal growth factor
EGLN1 egl-9 family hypoxia-inducible factor 1
ELMO3 engulfment and cell motility 3
ERMP1 endoplasmic reticulum metallopeptidase 1
EXOSC8 exosome component 8
F11R F11 receptor
FAM20B family with sequence similarity 20, member B
FAM213B family with sequence similarity 213, member B
FAM214B family with sequence similarity 214, member B
FAM222B family with sequence similarity 222, member B
FAM89A family with sequence similarity 89, member A
FAXC failed axon connections homolog (Drosophila)
FBXO2 F-box protein 2
FBXO4 F-box protein 4
FBXO7 F-box protein 7
FLJ42627 uncharacterized LOC645644
FOXL2 forkhead box L2
FRAS1 Fraser extracellular matrix complex subunit 1
FSTL1 follistatin-like 1
FUT11 fucosyltransferase 11 (alpha (1,3) fucosyltransferase)
GCNT7 glucosaminyl (N-acetyl) transferase family member 7
GGA3 golgi-associated, gamma adaptin ear containing, ARF binding protein 3
GIPC3 GIPC PDZ domain containing family, member 3
GIT1 G protein-coupled receptor kinase interacting ArfGAP 1
GLYATL3 glycine-N-acyltransferase-like 3
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GNG4 guanine nucleotide binding protein (G protein), gamma 4
GNPDA1 glucosamine-6-phosphate deaminase 1
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPR137B G protein-coupled receptor 137B
GPR161 G protein-coupled receptor 161
GPR27 G protein-coupled receptor 27
GRAMD4 GRAM domain containing 4
GRTP1 growth hormone regulated TBC protein 1
GSK3B glycogen synthase kinase 3 beta
GTF3C4 general transcription factor IIIC, polypeptide 4, 90kDa
GTSE1 G-2 and S-phase expressed 1
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
HAGHL hydroxyacylglutathione hydrolase-like
HEATR6 HEAT repeat containing 6
HHAT hedgehog acyltransferase
HMGXB4 HMG box domain containing 4
HSD17B1 hydroxysteroid (17-beta) dehydrogenase 1
HSD17B8 hydroxysteroid (17-beta) dehydrogenase 8
HSPA1L heat shock 70kDa protein 1-like
IFNA10 interferon, alpha 10
IGFBPL1 insulin-like growth factor binding protein-like 1
IGSF8 immunoglobulin superfamily, member 8
IL1RAP interleukin 1 receptor accessory protein
IL6R interleukin 6 receptor
INF2 inverted formin, FH2 and WH2 domain containing
INHBC inhibin, beta C
INPP5F inositol polyphosphate-5-phosphatase F
IRF4 interferon regulatory factor 4
ISL1 ISL LIM homeobox 1
ITGA3 integrin, alpha 3 (antigen CD49C, alpha 3 subunit of VLA-3 receptor)
ITGA9 integrin, alpha 9
ITIH3 inter-alpha-trypsin inhibitor heavy chain 3
JARID2 jumonji, AT rich interactive domain 2
JOSD1 Josephin domain containing 1
KANK1 KN motif and ankyrin repeat domains 1
KANSL1 KAT8 regulatory NSL complex subunit 1
KATNAL1 katanin p60 subunit A-like 1
KCNAB2 potassium channel, voltage gated subfamily A regulatory beta subunit 2
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5
KCNQ5 potassium channel, voltage gated KQT-like subfamily Q, member 5
KDM5B lysine (K)-specific demethylase 5B
KIAA1407 KIAA1407
KIF3B kinesin family member 3B
KLHL32 kelch-like family member 32
KRTAP6-3 keratin associated protein 6-3
LARGE like-glycosyltransferase
LGSN lengsin, lens protein with glutamine synthetase domain
LINC00235 long intergenic non-protein coding RNA 235
LINC00488 long intergenic non-protein coding RNA 488
LINC01547 long intergenic non-protein coding RNA 1547
LOC100129550 uncharacterized LOC100129550
LOC100130093 uncharacterized LOC100130093
LOC100134368 uncharacterized LOC100134368
LOC340357 uncharacterized LOC340357
LRCH3 leucine-rich repeats and calponin homology (CH) domain containing 3
LRGUK leucine-rich repeats and guanylate kinase domain containing
LRRN1 leucine rich repeat neuronal 1
LSM14B LSM14B, SCD6 homolog B (S. cerevisiae)
LZTR1 leucine-zipper-like transcription regulator 1
MAP6D1 MAP6 domain containing 1
MAPRE1 microtubule-associated protein, RP/EB family, member 1
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
MCF2L MCF.2 cell line derived transforming sequence-like
MCM5 minichromosome maintenance complex component 5
MED15 mediator complex subunit 15
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MGC16275 uncharacterized protein MGC16275
MGC57346 ADP-ribosylation factor pseudogene
MOCS3 molybdenum cofactor synthesis 3
MPDZ multiple PDZ domain protein
MPP2 membrane protein, palmitoylated 2 (MAGUK p55 subfamily member 2)
MRPL45 mitochondrial ribosomal protein L45
MSI2 musashi RNA-binding protein 2
MTMR12 myotubularin related protein 12
MYO10 myosin X
MYO19 myosin XIX
MYO1D myosin ID
MYRIP myosin VIIA and Rab interacting protein
NANOS1 nanos homolog 1 (Drosophila)
NCOA6 nuclear receptor coactivator 6
NDRG3 NDRG family member 3
NF1 neurofibromin 1
NFE2L1 nuclear factor, erythroid 2-like 1
NHLRC3 NHL repeat containing 3
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NOA1 nitric oxide associated 1
NOBOX NOBOX oogenesis homeobox
NOS1AP nitric oxide synthase 1 (neuronal) adaptor protein
NPB neuropeptide B
NRG3 neuregulin 3
NRP2 neuropilin 2
NRTN neurturin
NSG1 neuron specific gene family member 1
NUP155 nucleoporin 155kDa
OR10R2 olfactory receptor, family 10, subfamily R, member 2
OR13C2 olfactory receptor, family 13, subfamily C, member 2
OR2B11 olfactory receptor, family 2, subfamily B, member 11
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2Z1 olfactory receptor, family 2, subfamily Z, member 1
OR4C15 olfactory receptor, family 4, subfamily C, member 15
OTUD7B OTU deubiquitinase 7B
OTULIN OTU deubiquitinase with linear linkage specificity
PAGE5 P antigen family, member 5 (prostate associated)
PAK2 p21 protein (Cdc42/Rac)-activated kinase 2
PAK6 p21 protein (Cdc42/Rac)-activated kinase 6
PARD6G par-6 family cell polarity regulator gamma
PATE3 prostate and testis expressed 3
PCDHGA10 protocadherin gamma subfamily A, 10
PCID2 PCI domain containing 2
PCIF1 PDX1 C-terminal inhibiting factor 1
PCYOX1L prenylcysteine oxidase 1 like
PEX26 peroxisomal biogenesis factor 26
PGAP2 post-GPI attachment to proteins 2
PIGZ phosphatidylinositol glycan anchor biosynthesis, class Z
PIK3CB phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
PIP4K2B phosphatidylinositol-5-phosphate 4-kinase, type II, beta
PKDREJ polycystin (PKD) family receptor for egg jelly
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLXND1 plexin D1
POFUT1 protein O-fucosyltransferase 1
POLDIP3 polymerase (DNA-directed), delta interacting protein 3
POU4F1 POU class 4 homeobox 1
POU5F2 POU domain class 5, transcription factor 2
PPP1R17 protein phosphatase 1, regulatory subunit 17
PPP1R3D protein phosphatase 1, regulatory subunit 3D
PRKCD protein kinase C, delta
PROSER1 proline and serine rich 1
PRPF40B PRP40 pre-mRNA processing factor 40 homolog B (S. cerevisiae)
PRR14L proline rich 14-like
PRRT3 proline-rich transmembrane protein 3
PTPN14 protein tyrosine phosphatase, non-receptor type 14
PTTG1IP pituitary tumor-transforming 1 interacting protein
RAB17 RAB17, member RAS oncogene family
RAB36 RAB36, member RAS oncogene family
RAB5B RAB5B, member RAS oncogene family
RAD1 RAD1 checkpoint DNA exonuclease
RAI14 retinoic acid induced 14
RASAL2 RAS protein activator like 2
RASSF3 Ras association (RalGDS/AF-6) domain family member 3
RBSN rabenosyn, RAB effector
REPS2 RALBP1 associated Eps domain containing 2
RFT1 RFT1 homolog (S. cerevisiae)
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RGP1 RGP1 retrograde golgi transport homolog (S. cerevisiae)
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RHOBTB1 Rho-related BTB domain containing 1
RIPK4 receptor-interacting serine-threonine kinase 4
RNF144B ring finger protein 144B
RPL23 ribosomal protein L23
RPL3 ribosomal protein L3
RPRD1B regulation of nuclear pre-mRNA domain containing 1B
RPUSD3 RNA pseudouridylate synthase domain containing 3
RRAGA Ras-related GTP binding A
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RTCB RNA 2',3'-cyclic phosphate and 5'-OH ligase
RUNDC1 RUN domain containing 1
SDHAP2 succinate dehydrogenase complex, subunit A, flavoprotein pseudogene 2
SELV selenoprotein V
SEMA4G sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4G
SEPT3 septin 3
SEPT5 septin 5
SERHL serine hydrolase-like (pseudogene)
SERHL2 serine hydrolase-like 2
SFXN2 sideroflexin 2
SGSM1 small G protein signaling modulator 1
SKP2 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase
SLC19A2 solute carrier family 19 (thiamine transporter), member 2
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC26A11 solute carrier family 26 (anion exchanger), member 11
SLC2A4RG SLC2A4 regulator
SLC37A2 solute carrier family 37 (glucose-6-phosphate transporter), member 2
SLC45A2 solute carrier family 45, member 2
SLC7A1 solute carrier family 7 (cationic amino acid transporter, y+ system), member 1
SLC7A2 solute carrier family 7 (cationic amino acid transporter, y+ system), member 2
SLC7A4 solute carrier family 7, member 4
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLC9A8 solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8
SLC9C1 solute carrier family 9, subfamily C (Na+-transporting carboxylic acid decarboxylase), member 1
SMG7 SMG7 nonsense mediated mRNA decay factor
SNAP47 synaptosomal-associated protein, 47kDa
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNORA77 small nucleolar RNA, H/ACA box 77
SNX27 sorting nexin family member 27
SOAT1 sterol O-acyltransferase 1
SOGA1 suppressor of glucose, autophagy associated 1
SORBS1 sorbin and SH3 domain containing 1
SPG20 spastic paraplegia 20 (Troyer syndrome)
SPTBN2 spectrin, beta, non-erythrocytic 2
SRGAP2 SLIT-ROBO Rho GTPase activating protein 2
SSH3 slingshot protein phosphatase 3
SSR4P1 signal sequence receptor, delta pseudogene 1
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
STOML3 stomatin (EPB72)-like 3
STT3B STT3B, subunit of the oligosaccharyltransferase complex (catalytic)
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SYNGR1 synaptogyrin 1
SYNRG synergin, gamma
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TADA2A transcriptional adaptor 2A
TBC1D14 TBC1 domain family, member 14
TBC1D22A TBC1 domain family, member 22A
TBC1D5 TBC1 domain family, member 5
TCF20 transcription factor 20 (AR1)
TFDP2 transcription factor Dp-2 (E2F dimerization partner 2)
THAP7 THAP domain containing 7
TIMP2 TIMP metallopeptidase inhibitor 2
TM9SF4 transmembrane 9 superfamily protein member 4
TMCO3 transmembrane and coiled-coil domains 3
TMEM150C transmembrane protein 150C
TMEM191A transmembrane protein 191A (pseudogene)
TMEM199 transmembrane protein 199
TMEM25 transmembrane protein 25
TMPPE transmembrane protein with metallophosphoesterase domain
TOB1 transducer of ERBB2, 1
TOB2 transducer of ERBB2, 2
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TP53I13 tumor protein p53 inducible protein 13
TRIO trio Rho guanine nucleotide exchange factor
TRIOBP TRIO and F-actin binding protein
TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
TRNP1 TMF1-regulated nuclear protein 1
TRPC4 transient receptor potential cation channel, subfamily C, member 4
TRPM1 transient receptor potential cation channel, subfamily M, member 1
TSPO2 translocator protein 2
TSPY26P testis specific protein, Y-linked 26, pseudogene
TTC23L tetratricopeptide repeat domain 23-like
TTC38 tetratricopeptide repeat domain 38
TTI1 TELO2 interacting protein 1
TUBB2B tubulin, beta 2B class IIb
TUBB3 tubulin, beta 3 class III
TXNRD2 thioredoxin reductase 2
UBL3 ubiquitin-like 3
UGCG UDP-glucose ceramide glucosyltransferase
UGT3A1 UDP glycosyltransferase 3 family, polypeptide A1
USP13 ubiquitin specific peptidase 13 (isopeptidase T-3)
USPL1 ubiquitin specific peptidase like 1
VLDLR very low density lipoprotein receptor
WDR6 WD repeat domain 6
YPEL4 yippee-like 4 (Drosophila)
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
YWHAH tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, eta
ZBED3 zinc finger, BED-type containing 3
ZBTB42 zinc finger and BTB domain containing 42
ZBTB47 zinc finger and BTB domain containing 47
ZC3H7B zinc finger CCCH-type containing 7B
ZDHHC11 zinc finger, DHHC-type containing 11
ZFYVE28 zinc finger, FYVE domain containing 28
ZG16 zymogen granule protein 16
ZIM3 zinc finger, imprinted 3
ZNF197 zinc finger protein 197
ZNF496 zinc finger protein 496
ZNF503 zinc finger protein 503
ZNF619 zinc finger protein 619
ZNF749 zinc finger protein 749
ZNRF4 zinc and ring finger 4
ZXDC ZXD family zinc finger C

low expression

Symbol Name
ECI2 enoyl-CoA delta isomerase 2
TNRC6B trinucleotide repeat containing 6B
ZZEF1 zinc finger, ZZ-type with EF-hand domain 1