Skin Cutaneous Melanoma_SKCM_TCGA-EB-A82C-01A-11R-A352-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

378 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EB-A82C-01A-11R-A352-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AANAT aralkylamine N-acetyltransferase
ABCC10 ATP-binding cassette, sub-family C (CFTR/MRP), member 10
ABCF1 ATP-binding cassette, sub-family F (GCN20), member 1
ABT1 activator of basal transcription 1
ADGRE2 adhesion G protein-coupled receptor E2
AFMID arylformamidase
AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1
AKAP2 A kinase (PRKA) anchor protein 2
ALG1L ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like
ALS2CR12 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 12
ALYREF Aly/REF export factor
ANAPC13 anaphase promoting complex subunit 13
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
APEX1 APEX nuclease (multifunctional DNA repair enzyme) 1
APMAP adipocyte plasma membrane associated protein
APOM apolipoprotein M
ARF6 ADP-ribosylation factor 6
ARID1B AT rich interactive domain 1B (SWI1-like)
ARL16 ADP-ribosylation factor-like 16
ARMC7 armadillo repeat containing 7
ARSD arylsulfatase D
ASF1B anti-silencing function 1B histone chaperone
ATAD3C ATPase family, AAA domain containing 3C
ATAT1 alpha tubulin acetyltransferase 1
ATF6B activating transcription factor 6 beta
ATL1 atlastin GTPase 1
ATP2C1 ATPase, Ca++ transporting, type 2C, member 1
ATP6V1G1 ATPase, H+ transporting, lysosomal 13kDa, V1 subunit G1
ATPAF1 ATP synthase mitochondrial F1 complex assembly factor 1
B3GALT6 UDP-Gal:betaGal beta 1,3-galactosyltransferase polypeptide 6
B3GAT3 beta-1,3-glucuronyltransferase 3
BCAN brevican
BPESC1 blepharophimosis, epicanthus inversus and ptosis, candidate 1 (non-protein coding)
BPHL biphenyl hydrolase-like (serine hydrolase)
BRD1 bromodomain containing 1
C10ORF111 chromosome 10 open reading frame 111
C14ORF169 chromosome 14 open reading frame 169
C14ORF79 chromosome 14 open reading frame 79
C1ORF159 chromosome 1 open reading frame 159
C1ORF189 chromosome 1 open reading frame 189
C1ORF50 chromosome 1 open reading frame 50
C20ORF144 chromosome 20 open reading frame 144
C4ORF45 chromosome 4 open reading frame 45
C6ORF52 chromosome 6 open reading frame 52
C9ORF43 chromosome 9 open reading frame 43
CACHD1 cache domain containing 1
CADM3 cell adhesion molecule 3
CADPS2 Ca++-dependent secretion activator 2
CAMTA1 calmodulin binding transcription activator 1
CAP2 CAP, adenylate cyclase-associated protein, 2 (yeast)
CBX2 chromobox homolog 2
CCDC106 coiled-coil domain containing 106
CCDC17 coiled-coil domain containing 17
CCDC47 coiled-coil domain containing 47
CDC26 cell division cycle 26
CDC7 cell division cycle 7
CDCA7L cell division cycle associated 7-like
CELSR3 cadherin, EGF LAG seven-pass G-type receptor 3
CHRNB2 cholinergic receptor, nicotinic, beta 2 (neuronal)
CIRBP cold inducible RNA binding protein
CLP1 cleavage and polyadenylation factor I subunit 1
CNIH2 cornichon family AMPA receptor auxiliary protein 2
CNTF ciliary neurotrophic factor
CORT cortistatin
CPQ carboxypeptidase Q
CRIP2 cysteine-rich protein 2
CTDP1 CTD (carboxy-terminal domain, RNA polymerase II, polypeptide A) phosphatase, subunit 1
CUBN cubilin (intrinsic factor-cobalamin receptor)
CUL9 cullin 9
CXCL1 chemokine (C-X-C motif) ligand 1 (melanoma growth stimulating activity, alpha)
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
CYTH2 cytohesin 2
DAXX death-domain associated protein
DBT dihydrolipoamide branched chain transacylase E2
DCAF11 DDB1 and CUL4 associated factor 11
DCAF4 DDB1 and CUL4 associated factor 4
DCAF7 DDB1 and CUL4 associated factor 7
DCTN5 dynactin 5 (p25)
DDR1 discoidin domain receptor tyrosine kinase 1
DDX42 DEAD (Asp-Glu-Ala-Asp) box helicase 42
DEFB4A defensin, beta 4A
DHRS12 dehydrogenase/reductase (SDR family) member 12
DLGAP3 discs, large (Drosophila) homolog-associated protein 3
DMAP1 DNA methyltransferase 1 associated protein 1
DNAJB8 DnaJ (Hsp40) homolog, subfamily B, member 8
DNAJC11 DnaJ (Hsp40) homolog, subfamily C, member 11
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DNAJC8 DnaJ (Hsp40) homolog, subfamily C, member 8
DNPH1 2'-deoxynucleoside 5'-phosphate N-hydrolase 1
DYNLL2 dynein, light chain, LC8-type 2
EFCAB11 EF-hand calcium binding domain 11
EFCAB14 EF-hand calcium binding domain 14
EIF2B5 eukaryotic translation initiation factor 2B, subunit 5 epsilon, 82kDa
EPB41L3 erythrocyte membrane protein band 4.1-like 3
ERAL1 Era-like 12S mitochondrial rRNA chaperone 1
EXD2 exonuclease 3'-5' domain containing 2
EZR ezrin
F11R F11 receptor
FAM104A family with sequence similarity 104, member A
FAM213B family with sequence similarity 213, member B
FAM222B family with sequence similarity 222, member B
FAM69C family with sequence similarity 69, member C
FBLL1 fibrillarin-like 1
FBXL17 F-box and leucine-rich repeat protein 17
FBXO5 F-box protein 5
FER fer (fps/fes related) tyrosine kinase
FKBPL FK506 binding protein like
FLOT2 flotillin 2
FN3KRP fructosamine 3 kinase related protein
FOCAD focadhesin
FRMPD2B FERM and PDZ domain containing 2B, pseudogene
FUS FUS RNA binding protein
FXR1 fragile X mental retardation, autosomal homolog 1
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GNG10 guanine nucleotide binding protein (G protein), gamma 10
GNMT glycine N-methyltransferase
GPBP1L1 GC-rich promoter binding protein 1-like 1
GPR89B G protein-coupled receptor 89B
GSK3B glycogen synthase kinase 3 beta
GTF2A1L general transcription factor IIA, 1-like
GTF2IRD2 GTF2I repeat domain containing 2
GTF2IRD2B GTF2I repeat domain containing 2B
GTF2IRD2P1 GTF2I repeat domain containing 2 pseudogene 1
HIAT1 hippocampus abundant transcript 1
HINFP histone H4 transcription factor
HIST1H2AC histone cluster 1, H2ac
HIST1H2AH histone cluster 1, H2ah
HIST1H2BB histone cluster 1, H2bb
HIST1H2BK histone cluster 1, H2bk
HIST1H2BN histone cluster 1, H2bn
HIST1H2BO histone cluster 1, H2bo
HIST1H3E histone cluster 1, H3e
HIST1H4C histone cluster 1, H4c
HIST1H4H histone cluster 1, H4h
HIST3H2A histone cluster 3, H2a
HMGB3P1 high mobility group box 3 pseudogene 1
HMGN2 high mobility group nucleosomal binding domain 2
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HN1 hematological and neurological expressed 1
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HOMER3 homer scaffolding protein 3
HSDL2 hydroxysteroid dehydrogenase like 2
IMPACT impact RWD domain protein
INIP INTS3 and NABP interacting protein
INO80C INO80 complex subunit C
IRF2BPL interferon regulatory factor 2 binding protein-like
IRF4 interferon regulatory factor 4
JAG2 jagged 2
JARID2 jumonji, AT rich interactive domain 2
KAT5 K(lysine) acetyltransferase 5
KAT7 K(lysine) acetyltransferase 7
KATNA1 katanin p60 (ATPase containing) subunit A 1
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KIAA0368 KIAA0368
KIAA1958 KIAA1958
KIF13A kinesin family member 13A
KIF25 kinesin family member 25
KLHL21 kelch-like family member 21
KTN1-AS1 KTN1 antisense RNA 1
L3HYPDH L-3-hydroxyproline dehydratase (trans-)
LAMA5 laminin, alpha 5
LDLRAD4 low density lipoprotein receptor class A domain containing 4
LENG9 leukocyte receptor cluster (LRC) member 9
LINC00240 long intergenic non-protein coding RNA 240
LINC00310 long intergenic non-protein coding RNA 310
LINC01600 long intergenic non-protein coding RNA 1600
LIX1L Lix1 homolog (chicken) like
LMNA lamin A/C
LOC100128239 uncharacterized LOC100128239
LOC100270746 uncharacterized LOC100270746
LOC285696 uncharacterized LOC285696
LPAR3 lysophosphatidic acid receptor 3
LRRC16A leucine rich repeat containing 16A
LRRC41 leucine rich repeat containing 41
LYPLA2P1 lysophospholipase II pseudogene 1
LYRM4 LYR motif containing 4
MACROD1 MACRO domain containing 1
MAGEF1 melanoma antigen family F1
MAL mal, T-cell differentiation protein
MAN2A1 mannosidase, alpha, class 2A, member 1
MAPRE1 microtubule-associated protein, RP/EB family, member 1
MARC2 mitochondrial amidoxime reducing component 2
MCM3 minichromosome maintenance complex component 3
MCOLN3 mucolipin 3
MED18 mediator complex subunit 18
MED20 mediator complex subunit 20
MFRP membrane frizzled-related protein
MFSD11 major facilitator superfamily domain containing 11
MKNK1 MAP kinase interacting serine/threonine kinase 1
MSGN1 mesogenin 1
MTA1 metastasis associated 1
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTMR4 myotubularin related protein 4
MYADM myeloid-associated differentiation marker
MYO5C myosin VC
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2
NADK NAD kinase
NASP nuclear autoantigenic sperm protein (histone-binding)
NAT14 N-acetyltransferase 14 (GCN5-related, putative)
NBPF10 neuroblastoma breakpoint family, member 10
NEK6 NIMA-related kinase 6
NEK8 NIMA-related kinase 8
NEU1 sialidase 1 (lysosomal sialidase)
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NFE2L1 nuclear factor, erythroid 2-like 1
NKAIN1 Na+/K+ transporting ATPase interacting 1
NLGN1 neuroligin 1
NME2 NME/NM23 nucleoside diphosphate kinase 2
NOL9 nucleolar protein 9
NPAS3 neuronal PAS domain protein 3
NRM nurim (nuclear envelope membrane protein)
NSUN4 NOP2/Sun domain family, member 4
NT5C 5', 3'-nucleotidase, cytosolic
NUDT3 nudix (nucleoside diphosphate linked moiety X)-type motif 3
NUP85 nucleoporin 85kDa
NXF1 nuclear RNA export factor 1
OARD1 O-acyl-ADP-ribose deacylase 1
OGFOD3 2-oxoglutarate and iron-dependent oxygenase domain containing 3
OSBPL7 oxysterol binding protein-like 7
PALM2-AKAP2 PALM2-AKAP2 readthrough
PARD6G par-6 family cell polarity regulator gamma
PARP2 poly (ADP-ribose) polymerase 2
PARVA parvin, alpha
PCNXL4 pecanex-like 4 (Drosophila)
PDCD2 programmed cell death 2
PDZD9 PDZ domain containing 9
PFN2 profilin 2
PGBD1 piggyBac transposable element derived 1
PGBD2 piggyBac transposable element derived 2
PHF12 PHD finger protein 12
PHF13 PHD finger protein 13
PITHD1 PITH (C-terminal proteasome-interacting domain of thioredoxin-like) domain containing 1
PJA2 praja ring finger 2, E3 ubiquitin protein ligase
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PMF1 polyamine-modulated factor 1
PNMA1 paraneoplastic Ma antigen 1
POLE3 polymerase (DNA directed), epsilon 3, accessory subunit
POLH polymerase (DNA directed), eta
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
POMT2 protein-O-mannosyltransferase 2
PPP1R8 protein phosphatase 1, regulatory subunit 8
PPP1R9B protein phosphatase 1, regulatory subunit 9B
PPP2R5D protein phosphatase 2, regulatory subunit B', delta
PPT2 palmitoyl-protein thioesterase 2
PRDM11 PR domain containing 11
PRPF4 pre-mRNA processing factor 4
PSEN1 presenilin 1
PSMC5 proteasome (prosome, macropain) 26S subunit, ATPase, 5
PTBP3 polypyrimidine tract binding protein 3
PTGIS prostaglandin I2 (prostacyclin) synthase
PTGR1 prostaglandin reductase 1
PTK7 protein tyrosine kinase 7 (inactive)
PTPN21 protein tyrosine phosphatase, non-receptor type 21
PTPRJ protein tyrosine phosphatase, receptor type, J
RAB34 RAB34, member RAS oncogene family
RAC3 ras-related C3 botulinum toxin substrate 3 (rho family, small GTP binding protein Rac3)
RAD54L RAD54-like (S. cerevisiae)
RASSF2 Ras association (RalGDS/AF-6) domain family member 2
RBM23 RNA binding motif protein 23
RBM4 RNA binding motif protein 4
RCC2 regulator of chromosome condensation 2
RGL2 ral guanine nucleotide dissociation stimulator-like 2
RIN3 Ras and Rab interactor 3
RING1 ring finger protein 1
RIPK1 receptor (TNFRSF)-interacting serine-threonine kinase 1
RNF144B ring finger protein 144B
RNF5 ring finger protein 5, E3 ubiquitin protein ligase
RNF5P1 ring finger protein 5, E3 ubiquitin protein ligase pseudogene 1
ROPN1 rhophilin associated tail protein 1
RPA2 replication protein A2, 32kDa
RPL13AP6 ribosomal protein L13a pseudogene 6
RPL23A ribosomal protein L23a
RPS6KA4 ribosomal protein S6 kinase, 90kDa, polypeptide 4
RRP36 ribosomal RNA processing 36 homolog (S. cerevisiae)
RTCA RNA 3'-terminal phosphate cyclase
RTN3 reticulon 3
S100A6 S100 calcium binding protein A6
SAFB2 scaffold attachment factor B2
SEH1L SEH1-like (S. cerevisiae)
SFPQ splicing factor proline/glutamine-rich
SHISA2 shisa family member 2
SLC35B2 solute carrier family 35 (adenosine 3'-phospho 5'-phosphosulfate transporter), member B2
SLC41A3 solute carrier family 41, member 3
SLC43A1 solute carrier family 43 (amino acid system L transporter), member 1
SLC6A5 solute carrier family 6 (neurotransmitter transporter), member 5
SMARCD2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA24 small nucleolar RNA, H/ACA box 24
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA37 small nucleolar RNA, H/ACA box 37
SNORA4 small nucleolar RNA, H/ACA box 4
SNORA47 small nucleolar RNA, H/ACA box 47
SNORA51 small nucleolar RNA, H/ACA box 51
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA67 small nucleolar RNA, H/ACA box 67
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORA71D small nucleolar RNA, H/ACA box 71D
SNORA75 small nucleolar RNA, H/ACA box 75
SNORA76C small nucleolar RNA, H/ACA box 76C
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SNX30 sorting nexin family member 30
SOX2 SRY (sex determining region Y)-box 2
SOX9 SRY (sex determining region Y)-box 9
SP2 Sp2 transcription factor
SRSF2 serine/arginine-rich splicing factor 2
SSRP1 structure specific recognition protein 1
ST7-AS1 ST7 antisense RNA 1
STK19 serine/threonine kinase 19
STOML3 stomatin (EPB72)-like 3
STRIP1 striatin interacting protein 1
SUMO2 small ubiquitin-like modifier 2
SUPT16H suppressor of Ty 16 homolog (S. cerevisiae)
SUSD1 sushi domain containing 1
SZRD1 SUZ RNA binding domain containing 1
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
TBCC tubulin folding cofactor C
TBKBP1 TBK1 binding protein 1
TCTEX1D2 Tctex1 domain containing 2
TEKT4 tektin 4
TFAP2D transcription factor AP-2 delta (activating enhancer binding protein 2 delta)
TFDP1 transcription factor Dp-1
THBS3 thrombospondin 3
TM2D1 TM2 domain containing 1
TM9SF1 transmembrane 9 superfamily member 1
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TMEM109 transmembrane protein 109
TMX2 thioredoxin-related transmembrane protein 2
TPGS2 tubulin polyglutamylase complex subunit 2
TRAF4 TNF receptor-associated factor 4
TRERF1 transcriptional regulating factor 1
TRIM65 tripartite motif containing 65
TRIP6 thyroid hormone receptor interactor 6
TUBB tubulin, beta class I
TUBB2A tubulin, beta 2A class IIa
TUBB2B tubulin, beta 2B class IIb
TUBB3 tubulin, beta 3 class III
TUBGCP3 tubulin, gamma complex associated protein 3
TXN thioredoxin
TYMS thymidylate synthetase
UGCG UDP-glucose ceramide glucosyltransferase
UQCRH ubiquinol-cytochrome c reductase hinge protein
UQCRHL ubiquinol-cytochrome c reductase hinge protein-like
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
WDR63 WD repeat domain 63
WLS wntless Wnt ligand secretion mediator
XPO5 exportin 5
YEATS2 YEATS domain containing 2
YIPF3 Yip1 domain family, member 3
ZBTB12 zinc finger and BTB domain containing 12
ZBTB3 zinc finger and BTB domain containing 3
ZBTB48 zinc finger and BTB domain containing 48
ZDHHC14 zinc finger, DHHC-type containing 14
ZFP82 ZFP82 zinc finger protein
ZFYVE21 zinc finger, FYVE domain containing 21
ZIC4 Zic family member 4
ZKSCAN3 zinc finger with KRAB and SCAN domains 3
ZKSCAN4 zinc finger with KRAB and SCAN domains 4
ZMYM1 zinc finger, MYM-type 1
ZMYM4 zinc finger, MYM-type 4
ZNF22 zinc finger protein 22
ZNF304 zinc finger protein 304
ZNF311 zinc finger protein 311
ZNF416 zinc finger protein 416
ZNF425 zinc finger protein 425
ZNF442 zinc finger protein 442
ZNF521 zinc finger protein 521
ZNF618 zinc finger protein 618
ZNF701 zinc finger protein 701
ZNF702P zinc finger protein 702, pseudogene
ZNF766 zinc finger protein 766
ZNF776 zinc finger protein 776
ZNF837 zinc finger protein 837
ZSCAN22 zinc finger and SCAN domain containing 22
ZSCAN9 zinc finger and SCAN domain containing 9

low expression

Symbol Name
DIS3L DIS3 like exosome 3'-5' exoribonuclease