Skin Cutaneous Melanoma_SKCM_TCGA-EB-A6QZ-01A-12R-A32P-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

307 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EB-A6QZ-01A-12R-A32P-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD8 acyl-CoA dehydrogenase family, member 8
ACSM5 acyl-CoA synthetase medium-chain family member 5
ADAM23 ADAM metallopeptidase domain 23
ADCK1 aarF domain containing kinase 1
AGPAT6 1-acylglycerol-3-phosphate O-acyltransferase 6
AKAP8 A kinase (PRKA) anchor protein 8
AKR7L aldo-keto reductase family 7-like (gene/pseudogene)
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALX1 ALX homeobox 1
AP3M2 adaptor-related protein complex 3, mu 2 subunit
APOBEC3B apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3B
AQP8 aquaporin 8
ARFIP2 ADP-ribosylation factor interacting protein 2
ARHGAP23 Rho GTPase activating protein 23
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16
ARL16 ADP-ribosylation factor-like 16
ARMS2 age-related maculopathy susceptibility 2
ASB16 ankyrin repeat and SOCS box containing 16
ASB16-AS1 ASB16 antisense RNA 1
ASB9 ankyrin repeat and SOCS box containing 9
ASF1B anti-silencing function 1B histone chaperone
ATP6V1B1 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B1
ATP8B5P ATPase, class I, type 8B, member 5, pseudogene
ATRAID all-trans retinoic acid-induced differentiation factor
BCAS3 breast carcinoma amplified sequence 3
BCL2L11 BCL2-like 11 (apoptosis facilitator)
BFSP1 beaded filament structural protein 1, filensin
BMX BMX non-receptor tyrosine kinase
BNIP1 BCL2/adenovirus E1B 19kDa interacting protein 1
BRD8 bromodomain containing 8
BTD biotinidase
BUD13 BUD13 homolog (S. cerevisiae)
BZW2 basic leucine zipper and W2 domains 2
C11ORF31 chromosome 11 open reading frame 31
C11ORF71 chromosome 11 open reading frame 71
C11ORF88 chromosome 11 open reading frame 88
C14ORF178 chromosome 14 open reading frame 178
C20ORF173 chromosome 20 open reading frame 173
C22ORF24 chromosome 22 open reading frame 24
C2ORF16 chromosome 2 open reading frame 16
C7ORF65 chromosome 7 open reading frame 65
CASP1 caspase 1, apoptosis-related cysteine peptidase
CASP4 caspase 4, apoptosis-related cysteine peptidase
CBLN1 cerebellin 1 precursor
CCAR2 cell cycle and apoptosis regulator 2
CCDC144NL coiled-coil domain containing 144 family, N-terminal like
CCDC146 coiled-coil domain containing 146
CCDC159 coiled-coil domain containing 159
CCDC178 coiled-coil domain containing 178
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CDC25C cell division cycle 25C
CDCP2 CUB domain containing protein 2
CDK11A cyclin-dependent kinase 11A
CDK11B cyclin-dependent kinase 11B
CENPBD1 CENPB DNA-binding domains containing 1
CENPN centromere protein N
CHD1L chromodomain helicase DNA binding protein 1-like
CHMP2A charged multivesicular body protein 2A
CHMP3 charged multivesicular body protein 3
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CIRBP cold inducible RNA binding protein
CLCNKA chloride channel, voltage-sensitive Ka
CLPSL2 colipase-like 2
CLRN2 clarin 2
CNTF ciliary neurotrophic factor
COL28A1 collagen, type XXVIII, alpha 1
CRB1 crumbs family member 1, photoreceptor morphogenesis associated
CRYL1 crystallin, lambda 1
CSAG2 CSAG family, member 2
CTNNBL1 catenin, beta like 1
CXORF65 chromosome X open reading frame 65
DCAKD dephospho-CoA kinase domain containing
DIAPH1 diaphanous-related formin 1
DIRC1 disrupted in renal carcinoma 1
DMBX1 diencephalon/mesencephalon homeobox 1
DMC1 DNA meiotic recombinase 1
DNAJC22 DnaJ (Hsp40) homolog, subfamily C, member 22
DSCR4 Down syndrome critical region 4
DUSP28 dual specificity phosphatase 28
EDDM3A epididymal protein 3A
EIF4EBP3 eukaryotic translation initiation factor 4E binding protein 3
EMID1 EMI domain containing 1
EPB41L1 erythrocyte membrane protein band 4.1-like 1
EPO erythropoietin
ERCC8 excision repair cross-complementation group 8
ERICH6B glutamate-rich 6B
ERMAP erythroblast membrane-associated protein (Scianna blood group)
EWSR1 EWS RNA-binding protein 1
EXO5 exonuclease 5
EXOC3-AS1 EXOC3 antisense RNA 1
F7 coagulation factor VII (serum prothrombin conversion accelerator)
FAM168B family with sequence similarity 168, member B
FAM187B family with sequence similarity 187, member B
FAM209B family with sequence similarity 209, member B
FAM32A family with sequence similarity 32, member A
FBXO4 F-box protein 4
FERMT3 fermitin family member 3
FHDC1 FH2 domain containing 1
FIP1L1 factor interacting with PAPOLA and CPSF1
FKBP9P1 FK506 binding protein 9 pseudogene 1
FLJ36000 uncharacterized FLJ36000
FLJ37453 uncharacterized LOC729614
FRAS1 Fraser extracellular matrix complex subunit 1
FXYD3 FXYD domain containing ion transport regulator 3
FXYD5 FXYD domain containing ion transport regulator 5
FXYD7 FXYD domain containing ion transport regulator 7
GABRQ gamma-aminobutyric acid (GABA) A receptor, theta
GAD2 glutamate decarboxylase 2 (pancreatic islets and brain, 65kDa)
GINS2 GINS complex subunit 2 (Psf2 homolog)
GLOD4 glyoxalase domain containing 4
GPN1 GPN-loop GTPase 1
GREB1L growth regulation by estrogen in breast cancer-like
GSTZ1 glutathione S-transferase zeta 1
GTDC1 glycosyltransferase-like domain containing 1
GYPE glycophorin E (MNS blood group)
HAUS5 HAUS augmin-like complex, subunit 5
HCRTR1 hypocretin (orexin) receptor 1
HERC2 HECT and RLD domain containing E3 ubiquitin protein ligase 2
HHLA2 HERV-H LTR-associating 2
HINT1 histidine triad nucleotide binding protein 1
HIRIP3 HIRA interacting protein 3
HMBS hydroxymethylbilane synthase
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HNRNPA2B1 heterogeneous nuclear ribonucleoprotein A2/B1
HNRNPM heterogeneous nuclear ribonucleoprotein M
HNRNPR heterogeneous nuclear ribonucleoprotein R
HTR2B 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
HTT huntingtin
HYDIN HYDIN, axonemal central pair apparatus protein
HYLS1 hydrolethalus syndrome 1
IGFBP2 insulin-like growth factor binding protein 2, 36kDa
IGSF5 immunoglobulin superfamily, member 5
ILF3 interleukin enhancer binding factor 3, 90kDa
INHBC inhibin, beta C
INTS9 integrator complex subunit 9
IQCC IQ motif containing C
ITPK1-AS1 ITPK1 antisense RNA 1
KAT7 K(lysine) acetyltransferase 7
KCNK2 potassium channel, two pore domain subfamily K, member 2
KCNQ1DN KCNQ1 downstream neighbor (non-protein coding)
KCNRG potassium channel regulator
KDM4A lysine (K)-specific demethylase 4A
KLF17 Kruppel-like factor 17
LDHC lactate dehydrogenase C
LDLRAP1 low density lipoprotein receptor adaptor protein 1
LHFPL2 lipoma HMGIC fusion partner-like 2
LINC00314 long intergenic non-protein coding RNA 314
LINC00339 long intergenic non-protein coding RNA 339
LINC01465 long intergenic non-protein coding RNA 1465
LINC01587 long intergenic non-protein coding RNA 1587
LOC143666 uncharacterized LOC143666
LOC148413 uncharacterized LOC148413
LOC200726 hCG1657980
LOC286359 uncharacterized LOC286359
LOC441204 uncharacterized LOC441204
LOC646762 uncharacterized LOC646762
LRRTM1 leucine rich repeat transmembrane neuronal 1
LSR lipolysis stimulated lipoprotein receptor
LYRM9 LYR motif containing 9
MAGEC1 melanoma antigen family C1
MAGEC3 melanoma antigen family C3
MAU2 MAU2 sister chromatid cohesion factor
MC3R melanocortin 3 receptor
MGAT4C MGAT4 family, member C
MIA melanoma inhibitory activity
MINOS1 mitochondrial inner membrane organizing system 1
MPRIP myosin phosphatase Rho interacting protein
MR1 major histocompatibility complex, class I-related
MRPL20 mitochondrial ribosomal protein L20
MS4A12 membrane-spanning 4-domains, subfamily A, member 12
MS4A14 membrane-spanning 4-domains, subfamily A, member 14
MS4A7 membrane-spanning 4-domains, subfamily A, member 7
MSRA methionine sulfoxide reductase A
MX2 MX dynamin-like GTPase 2
MYCBP MYC binding protein
NADK NAD kinase
NBL1 neuroblastoma 1, DAN family BMP antagonist
NBR2 neighbor of BRCA1 gene 2 (non-protein coding)
NEK8 NIMA-related kinase 8
NEUROG1 neurogenin 1
NFKBIB nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta
NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1
NKX2-4 NK2 homeobox 4
NLRP14 NLR family, pyrin domain containing 14
NPHP4 nephronophthisis 4
NPPB natriuretic peptide B
OLFM1 olfactomedin 1
OMG oligodendrocyte myelin glycoprotein
OR14C36 olfactory receptor, family 14, subfamily C, member 36
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR2H1 olfactory receptor, family 2, subfamily H, member 1
OR2M1P olfactory receptor, family 2, subfamily M, member 1 pseudogene
OR4F15 olfactory receptor, family 4, subfamily F, member 15
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR52H1 olfactory receptor, family 52, subfamily H, member 1
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR6K3 olfactory receptor, family 6, subfamily K, member 3
P3H1 prolyl 3-hydroxylase 1
PAF1 Paf1, RNA polymerase II associated factor, homolog (S. cerevisiae)
PARVA parvin, alpha
PCBD2 pterin-4 alpha-carbinolamine dehydratase/dimerization cofactor of hepatocyte nuclear factor 1 alpha (TCF1) 2
PCDH7 protocadherin 7
PCP2 Purkinje cell protein 2
PDYN prodynorphin
PGAP3 post-GPI attachment to proteins 3
PIGW phosphatidylinositol glycan anchor biosynthesis, class W
PIR pirin (iron-binding nuclear protein)
PKD2L2 polycystic kidney disease 2-like 2
PKHD1 polycystic kidney and hepatic disease 1 (autosomal recessive)
PKNOX2 PBX/knotted 1 homeobox 2
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLEKHD1 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
PMS2P2 postmeiotic segregation increased 2 pseudogene 2
POLR2G polymerase (RNA) II (DNA directed) polypeptide G
POLR3GL polymerase (RNA) III (DNA directed) polypeptide G (32kD)-like
POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)
PPIE peptidylprolyl isomerase E (cyclophilin E)
PRG2 proteoglycan 2, bone marrow (natural killer cell activator, eosinophil granule major basic protein)
PRR19 proline rich 19
PRSS48 protease, serine, 48
PRSS55 protease, serine, 55
PSMA8 proteasome (prosome, macropain) subunit, alpha type, 8
PTPRA protein tyrosine phosphatase, receptor type, A
PTPRJ protein tyrosine phosphatase, receptor type, J
PTRHD1 peptidyl-tRNA hydrolase domain containing 1
RACGAP1P Rac GTPase activating protein 1 pseudogene
RASA3 RAS p21 protein activator 3
RBM3 RNA binding motif (RNP1, RRM) protein 3
RDM1 RAD52 motif containing 1
RHBDL3 rhomboid, veinlet-like 3 (Drosophila)
RNASE1 ribonuclease, RNase A family, 1 (pancreatic)
RNF135 ring finger protein 135
RPA1 replication protein A1, 70kDa
RYR2 ryanodine receptor 2 (cardiac)
SAE1 SUMO1 activating enzyme subunit 1
SFT2D3 SFT2 domain containing 3
SFXN5 sideroflexin 5
SHBG sex hormone-binding globulin
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SKAP1 src kinase associated phosphoprotein 1
SLC22A1 solute carrier family 22 (organic cation transporter), member 1
SLC35E2 solute carrier family 35, member E2
SLC9B1 solute carrier family 9, subfamily B (NHA1, cation proton antiporter 1), member 1
SMIM7 small integral membrane protein 7
SNCA synuclein, alpha (non A4 component of amyloid precursor)
SNHG11 small nucleolar RNA host gene 11
SNHG20 small nucleolar RNA host gene 20
SNHG4 small nucleolar RNA host gene 4
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA61 small nucleolar RNA, H/ACA box 61
SNRNP40 small nuclear ribonucleoprotein 40kDa (U5)
SPAM1 sperm adhesion molecule 1 (PH-20 hyaluronidase, zona pellucida binding)
SPATA9 spermatogenesis associated 9
SPATS2 spermatogenesis associated, serine-rich 2
SRA1 steroid receptor RNA activator 1
SRGAP1 SLIT-ROBO Rho GTPase activating protein 1
SRR serine racemase
SSBP2 single-stranded DNA binding protein 2
SSH2 slingshot protein phosphatase 2
SSX1 synovial sarcoma, X breakpoint 1
ST6GALNAC2 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 2
STARD8 StAR-related lipid transfer (START) domain containing 8
STK16 serine/threonine kinase 16
STRA13 stimulated by retinoic acid 13
SUMF2 sulfatase modifying factor 2
SVOPL SVOP-like
TAC4 tachykinin 4 (hemokinin)
TAF15 TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 68kDa
TANC2 tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2
TAS2R8 taste receptor, type 2, member 8
TBC1D3F TBC1 domain family, member 3F
TBX2 T-box 2
TBX22 T-box 22
TCEAL3 transcription elongation factor A (SII)-like 3
TCEAL6 transcription elongation factor A (SII)-like 6
TIMELESS timeless circadian clock
TMEM128 transmembrane protein 128
TMEM171 transmembrane protein 171
TMEM199 transmembrane protein 199
TMEM98 transmembrane protein 98
TOE1 target of EGR1, member 1 (nuclear)
TPSD1 tryptase delta 1
TRAF3 TNF receptor-associated factor 3
TRAPPC3 trafficking protein particle complex 3
TRIM41 tripartite motif containing 41
TRIM51 tripartite motif-containing 51
TRNAU1AP tRNA selenocysteine 1 associated protein 1
TSPYL2 TSPY-like 2
TSR2 TSR2, 20S rRNA accumulation, homolog (S. cerevisiae)
TTC23L tetratricopeptide repeat domain 23-like
TTLL4 tubulin tyrosine ligase-like family member 4
UBE2D2 ubiquitin-conjugating enzyme E2D 2
UBR7 ubiquitin protein ligase E3 component n-recognin 7 (putative)
UBTF upstream binding transcription factor, RNA polymerase I
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
VPS13D vacuolar protein sorting 13 homolog D (S. cerevisiae)
VPS25 vacuolar protein sorting 25 homolog (S. cerevisiae)
VSIG10 V-set and immunoglobulin domain containing 10
XKR5 XK, Kell blood group complex subunit-related family, member 5
ZACN zinc activated ligand-gated ion channel
ZMAT2 zinc finger, matrin-type 2
ZNF18 zinc finger protein 18
ZNF280A zinc finger protein 280A
ZNF346 zinc finger protein 346
ZNF563 zinc finger protein 563
ZNF846 zinc finger protein 846
ZSWIM7 zinc finger, SWIM-type containing 7