Skin Cutaneous Melanoma_SKCM_TCGA-EB-A51B-01A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

342 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-EB-A51B-01A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AADAT aminoadipate aminotransferase
ABCB11 ATP-binding cassette, sub-family B (MDR/TAP), member 11
ABRACL ABRA C-terminal like
ACOT9 acyl-CoA thioesterase 9
ACSBG1 acyl-CoA synthetase bubblegum family member 1
ADAT2 adenosine deaminase, tRNA-specific 2
ADK adenosine kinase
AGAP7P ArfGAP with GTPase domain, ankyrin repeat and PH domain 7, pseudogene
ANKLE2 ankyrin repeat and LEM domain containing 2
ANKRD13C ankyrin repeat domain 13C
ANXA2 annexin A2
ANXA2P2 annexin A2 pseudogene 2
ARHGAP24 Rho GTPase activating protein 24
ARL4A ADP-ribosylation factor-like 4A
ARL4D ADP-ribosylation factor-like 4D
ARL6IP1 ADP-ribosylation factor-like 6 interacting protein 1
ASPHD2 aspartate beta-hydroxylase domain containing 2
ATP10A ATPase, class V, type 10A
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATXN8OS ATXN8 opposite strand (non-protein coding)
AURKA aurora kinase A
BCKDHB branched chain keto acid dehydrogenase E1, beta polypeptide
BTBD18 BTB (POZ) domain containing 18
BTF3L4 basic transcription factor 3-like 4
BTN2A1 butyrophilin, subfamily 2, member A1
BTN2A2 butyrophilin, subfamily 2, member A2
BTN2A3P butyrophilin, subfamily 2, member A3, pseudogene
C12ORF4 chromosome 12 open reading frame 4
C17ORF47 chromosome 17 open reading frame 47
C17ORF78 chromosome 17 open reading frame 78
C3ORF79 chromosome 3 open reading frame 79
C4ORF32 chromosome 4 open reading frame 32
C5ORF52 chromosome 5 open reading frame 52
CA13 carbonic anhydrase XIII
CA5B carbonic anhydrase VB, mitochondrial
CACNG4 calcium channel, voltage-dependent, gamma subunit 4
CALML4 calmodulin-like 4
CCBL2 cysteine conjugate-beta lyase 2
CCDC169 coiled-coil domain containing 169
CCDC77 coiled-coil domain containing 77
CCNB2 cyclin B2
CCSAP centriole, cilia and spindle-associated protein
CCT6B chaperonin containing TCP1, subunit 6B (zeta 2)
CDCA3 cell division cycle associated 3
CDK1 cyclin-dependent kinase 1
CELP carboxyl ester lipase pseudogene
CEP72 centrosomal protein 72kDa
CGNL1 cingulin-like 1
CIAPIN1 cytokine induced apoptosis inhibitor 1
CIITA class II, major histocompatibility complex, transactivator
CISH cytokine inducible SH2-containing protein
CKAP2 cytoskeleton associated protein 2
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
COX18 COX18 cytochrome c oxidase assembly factor
CPEB2 cytoplasmic polyadenylation element binding protein 2
CRYZ crystallin, zeta (quinone reductase)
CTNNAL1 catenin (cadherin-associated protein), alpha-like 1
CTRC chymotrypsin C (caldecrin)
CTSO cathepsin O
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
CYP7A1 cytochrome P450, family 7, subfamily A, polypeptide 1
DACT2 dishevelled-binding antagonist of beta-catenin 2
DCX doublecortin
DDHD2 DDHD domain containing 2
DDX12P DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 12, pseudogene
DENND6A DENN/MADD domain containing 6A
DPH6 diphthamine biosynthesis 6
DSN1 DSN1, MIS12 kinetochore complex component
DTWD1 DTW domain containing 1
DTWD2 DTW domain containing 2
DYRK4 dual-specificity tyrosine-(Y)-phosphorylation regulated kinase 4
ECT2L epithelial cell transforming 2 like
EIF2AK4 eukaryotic translation initiation factor 2 alpha kinase 4
EIF3J eukaryotic translation initiation factor 3, subunit J
ERMARD ER membrane-associated RNA degradation
ESR2 estrogen receptor 2 (ER beta)
EXD1 exonuclease 3'-5' domain containing 1
F2R coagulation factor II (thrombin) receptor
FAM101A family with sequence similarity 101, member A
FAM120C family with sequence similarity 120C
FAM129B family with sequence similarity 129, member B
FAM157A family with sequence similarity 157, member A
FAM177A1 family with sequence similarity 177, member A1
FAM213B family with sequence similarity 213, member B
FAM219B family with sequence similarity 219, member B
FAXC failed axon connections homolog (Drosophila)
FBXL14 F-box and leucine-rich repeat protein 14
FBXL3 F-box and leucine-rich repeat protein 3
FBXL5 F-box and leucine-rich repeat protein 5
FBXO5 F-box protein 5
FEM1C fem-1 homolog c (C. elegans)
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FOXR1 forkhead box R1
FSD1L fibronectin type III and SPRY domain containing 1-like
FUT1 fucosyltransferase 1 (galactoside 2-alpha-L-fucosyltransferase, H blood group)
GANC glucosidase, alpha; neutral C
GJA10 gap junction protein, alpha 10, 62kDa
GJA3 gap junction protein, alpha 3, 46kDa
GNRH1 gonadotropin-releasing hormone 1 (luteinizing-releasing hormone)
GPAT2 glycerol-3-phosphate acyltransferase 2, mitochondrial
GPR1 G protein-coupled receptor 1
GPR173 G protein-coupled receptor 173
GPR68 G protein-coupled receptor 68
GTF2IRD2B GTF2I repeat domain containing 2B
HACD1 3-hydroxyacyl-CoA dehydratase 1
HACD3 3-hydroxyacyl-CoA dehydratase 3
HADH hydroxyacyl-CoA dehydrogenase
HIATL1 hippocampus abundant transcript-like 1
HIGD1A HIG1 hypoxia inducible domain family, member 1A
HLA-DMA major histocompatibility complex, class II, DM alpha
HLA-DOA major histocompatibility complex, class II, DO alpha
HLA-DPA1 major histocompatibility complex, class II, DP alpha 1
HLA-DPB1 major histocompatibility complex, class II, DP beta 1
HLA-DQA1 major histocompatibility complex, class II, DQ alpha 1
HLA-DQB1 major histocompatibility complex, class II, DQ beta 1
HLA-DRA major histocompatibility complex, class II, DR alpha
HLA-DRB1 major histocompatibility complex, class II, DR beta 1
HLA-DRB5 major histocompatibility complex, class II, DR beta 5
HLA-DRB6 major histocompatibility complex, class II, DR beta 6 (pseudogene)
HLA-L major histocompatibility complex, class I, L (pseudogene)
IFFO1 intermediate filament family orphan 1
IL15 interleukin 15
INO80 INO80 complex subunit
INTS12 integrator complex subunit 12
IRF4 interferon regulatory factor 4
ISCA1 iron-sulfur cluster assembly 1
ITFG2 integrin alpha FG-GAP repeat containing 2
KCNK16 potassium channel, two pore domain subfamily K, member 16
KIF23 kinesin family member 23
KIF25 kinesin family member 25
KLF9 Kruppel-like factor 9
KLHL1 kelch-like family member 1
KLLN killin, p53-regulated DNA replication inhibitor
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1
KNSTRN kinetochore-localized astrin/SPAG5 binding protein
L3HYPDH L-3-hydroxyproline dehydratase (trans-)
LCMT2 leucine carboxyl methyltransferase 2
LHX3 LIM homeobox 3
LILRP2 leukocyte immunoglobulin-like receptor pseudogene 2
LINC00238 long intergenic non-protein coding RNA 238
LINC00244 long intergenic non-protein coding RNA 244
LINC00312 long intergenic non-protein coding RNA 312
LINC00320 long intergenic non-protein coding RNA 320
LINC00852 long intergenic non-protein coding RNA 852
LOC100132215 uncharacterized LOC100132215
LOC100133050 glucuronidase, beta pseudogene
LOC285696 uncharacterized LOC285696
LOC441455 makorin ring finger protein 1 pseudogene
LOC646471 uncharacterized LOC646471
LOC90834
LPAL2 lipoprotein, Lp(a)-like 2, pseudogene
LRP2 low density lipoprotein receptor-related protein 2
LRP8 low density lipoprotein receptor-related protein 8, apolipoprotein e receptor
LRRC37A2 leucine rich repeat containing 37, member A2
LTBR lymphotoxin beta receptor (TNFR superfamily, member 3)
LYST lysosomal trafficking regulator
MANBAL mannosidase, beta A, lysosomal-like
MARCKS myristoylated alanine-rich protein kinase C substrate
MBNL2 muscleblind-like splicing regulator 2
MCF2L MCF.2 cell line derived transforming sequence-like
MCHR1 melanin-concentrating hormone receptor 1
MCU mitochondrial calcium uniporter
MDGA1 MAM domain containing glycosylphosphatidylinositol anchor 1
MIMT1 MER1 repeat containing imprinted transcript 1 (non-protein coding)
MINA MYC induced nuclear antigen
MLLT10 myeloid/lymphoid or mixed-lineage leukemia (trithorax homolog, Drosophila); translocated to, 10
MPHOSPH6 M-phase phosphoprotein 6
MPPED2 metallophosphoesterase domain containing 2
MRPS18C mitochondrial ribosomal protein S18C
MS4A3 membrane-spanning 4-domains, subfamily A, member 3 (hematopoietic cell-specific)
MTFMT mitochondrial methionyl-tRNA formyltransferase
MTHFD1L methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1-like
MTMR10 myotubularin related protein 10
MTMR7 myotubularin related protein 7
MTMR9LP myotubularin related protein 9-like, pseudogene
MTRF1L mitochondrial translational release factor 1-like
MTVR2 mouse mammary tumor virus receptor homolog 2
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1
NAMPT nicotinamide phosphoribosyltransferase
NBPF6 neuroblastoma breakpoint family, member 6
NHLRC3 NHL repeat containing 3
NIPA2 non imprinted in Prader-Willi/Angelman syndrome 2
NMRK1 nicotinamide riboside kinase 1
NPEPL1 aminopeptidase-like 1
NPSR1 neuropeptide S receptor 1
NRCAM neuronal cell adhesion molecule
NTAN1 N-terminal asparagine amidase
NUDT6 nudix (nucleoside diphosphate linked moiety X)-type motif 6
NUSAP1 nucleolar and spindle associated protein 1
NXNL2 nucleoredoxin-like 2
NXPE1 neurexophilin and PC-esterase domain family, member 1
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OPALIN oligodendrocytic myelin paranodal and inner loop protein
OR2AK2 olfactory receptor, family 2, subfamily AK, member 2
OR2L3 olfactory receptor, family 2, subfamily L, member 3
OR2L8 olfactory receptor, family 2, subfamily L, member 8 (gene/pseudogene)
OR4F21 olfactory receptor, family 4, subfamily F, member 21
OR6F1 olfactory receptor, family 6, subfamily F, member 1
OSTF1 osteoclast stimulating factor 1
PBK PDZ binding kinase
PCDH15 protocadherin-related 15
PCDHGA12 protocadherin gamma subfamily A, 12
PCMT1 protein-L-isoaspartate (D-aspartate) O-methyltransferase
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDXDC2P pyridoxal-dependent decarboxylase domain containing 2, pseudogene
PEG3 paternally expressed 3
PELI2 pellino E3 ubiquitin protein ligase family member 2
PEX7 peroxisomal biogenesis factor 7
PHLDA1 pleckstrin homology-like domain, family A, member 1
PIEZO1 piezo-type mechanosensitive ion channel component 1
PIF1 PIF1 5'-to-3' DNA helicase
PIGW phosphatidylinositol glycan anchor biosynthesis, class W
PKD2 polycystic kidney disease 2 (autosomal dominant)
PLA2G2C phospholipase A2, group IIC
PLEKHG4B pleckstrin homology domain containing, family G (with RhoGef domain) member 4B
PMAIP1 phorbol-12-myristate-13-acetate-induced protein 1
PP14571 uncharacterized LOC100130449
PPFIA2 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 2
PPP4R1L protein phosphatase 4, regulatory subunit 1-like (pseudogene)
PRR16 proline rich 16
PRRG1 proline rich Gla (G-carboxyglutamic acid) 1
PSPC1 paraspeckle component 1
PTCH1 patched 1
PTEN phosphatase and tensin homolog
PTMS parathymosin
PTPDC1 protein tyrosine phosphatase domain containing 1
RAB14 RAB14, member RAS oncogene family
RAB4A RAB4A, member RAS oncogene family
RARS2 arginyl-tRNA synthetase 2, mitochondrial
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RBM3 RNA binding motif (RNP1, RRM) protein 3
RBM5 RNA binding motif protein 5
RDX radixin
REPS2 RALBP1 associated Eps domain containing 2
RFK riboflavin kinase
RFX5 regulatory factor X, 5 (influences HLA class II expression)
RHOA ras homolog family member A
RIMKLB ribosomal modification protein rimK-like family member B
RSU1 Ras suppressor protein 1
RTF1 Rtf1, Paf1/RNA polymerase II complex component, homolog (S. cerevisiae)
RUNX1 runt-related transcription factor 1
SAP30 Sin3A-associated protein, 30kDa
SCLT1 sodium channel and clathrin linker 1
SDHAF4 succinate dehydrogenase complex assembly factor 4
SEC22C SEC22 vesicle trafficking protein homolog C (S. cerevisiae)
SEC63 SEC63 homolog (S. cerevisiae)
SETDB2 SET domain, bifurcated 2
SFPQ splicing factor proline/glutamine-rich
SH3BP2 SH3-domain binding protein 2
SH3GL2 SH3-domain GRB2-like 2
SIDT2 SID1 transmembrane family, member 2
SLC25A15 solute carrier family 25 (mitochondrial carrier; ornithine transporter) member 15
SLC25A24 solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24
SLC6A6 solute carrier family 6 (neurotransmitter transporter), member 6
SLFN11 schlafen family member 11
SLFN12 schlafen family member 12
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMIM19 small integral membrane protein 19
SNHG11 small nucleolar RNA host gene 11
SNHG15 small nucleolar RNA host gene 15
SNORA16A small nucleolar RNA, H/ACA box 16A
SNORA22 small nucleolar RNA, H/ACA box 22
SNORA2A small nucleolar RNA, H/ACA box 2A
SNORA5C small nucleolar RNA, H/ACA box 5C
SNORA6 small nucleolar RNA, H/ACA box 6
SNORA71B small nucleolar RNA, H/ACA box 71B
SNORA71E small nucleolar RNA, H/ACA box 71E
SOCS2 suppressor of cytokine signaling 2
SORD sorbitol dehydrogenase
SPHAR S-phase response (cyclin related)
SPIRE2 spire-type actin nucleation factor 2
SPOCK1 sparc/osteonectin, cwcv and kazal-like domains proteoglycan (testican) 1
SPTSSA serine palmitoyltransferase, small subunit A
SSTR4 somatostatin receptor 4
ST5 suppression of tumorigenicity 5
ST7-AS1 ST7 antisense RNA 1
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
STX2 syntaxin 2
STX3 syntaxin 3
SULT4A1 sulfotransferase family 4A, member 1
TAF13 TAF13 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 18kDa
TAMM41 TAM41, mitochondrial translocator assembly and maintenance protein, homolog (S. cerevisiae)
TAS2R10 taste receptor, type 2, member 10
TAS2R14 taste receptor, type 2, member 14
TAS2R20 taste receptor, type 2, member 20
TAS2R30 taste receptor, type 2, member 30
TAS2R42 taste receptor, type 2, member 42
TAS2R50 taste receptor, type 2, member 50
TBC1D19 TBC1 domain family, member 19
TCAIM T cell activation inhibitor, mitochondrial
TEC tec protein tyrosine kinase
TGFBR1 transforming growth factor, beta receptor 1
THAP9 THAP domain containing 9
TIGAR TP53 induced glycolysis regulatory phosphatase
TMEM169 transmembrane protein 169
TMEM171 transmembrane protein 171
TMEM206 transmembrane protein 206
TMEM244 transmembrane protein 244
TMEM62 transmembrane protein 62
TMEM65 transmembrane protein 65
TMEM87A transmembrane protein 87A
TMTC2 transmembrane and tetratricopeptide repeat containing 2
TRNAU1AP tRNA selenocysteine 1 associated protein 1
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TSC22D1 TSC22 domain family, member 1
TSEN2 TSEN2 tRNA splicing endonuclease subunit
TTC19 tetratricopeptide repeat domain 19
TUBB3 tubulin, beta 3 class III
TUBGCP5 tubulin, gamma complex associated protein 5
TUFT1 tuftelin 1
UBE2A ubiquitin-conjugating enzyme E2A
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UQCC1 ubiquinol-cytochrome c reductase complex assembly factor 1
USP45 ubiquitin specific peptidase 45
USP50 ubiquitin specific peptidase 50
UTF1 undifferentiated embryonic cell transcription factor 1
VAMP1 vesicle-associated membrane protein 1 (synaptobrevin 1)
VAMP3 vesicle-associated membrane protein 3
VAMP4 vesicle-associated membrane protein 4
VAPB VAMP (vesicle-associated membrane protein)-associated protein B and C
VCX2 variable charge, X-linked 2
WDR47 WD repeat domain 47
WDR63 WD repeat domain 63
WHAMM WAS protein homolog associated with actin, golgi membranes and microtubules
XPC xeroderma pigmentosum, complementation group C
YWHAB tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, beta
ZBTB24 zinc finger and BTB domain containing 24
ZBTB8A zinc finger and BTB domain containing 8A
ZC3H12C zinc finger CCCH-type containing 12C
ZFP82 ZFP82 zinc finger protein
ZFYVE28 zinc finger, FYVE domain containing 28
ZIM2 zinc finger, imprinted 2
ZNF197 zinc finger protein 197
ZNF276 zinc finger protein 276
ZNF367 zinc finger protein 367
ZNF439 zinc finger protein 439
ZNF449 zinc finger protein 449
ZNF596 zinc finger protein 596
ZNF608 zinc finger protein 608
ZNF665 zinc finger protein 665
ZNF720 zinc finger protein 720
ZNF823 zinc finger protein 823