Skin Cutaneous Melanoma_SKCM_TCGA-D9-A3Z4-01A-11R-A239-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

428 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D9-A3Z4-01A-11R-A239-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABCC5 ATP-binding cassette, sub-family C (CFTR/MRP), member 5
ACTRT1 actin-related protein T1
ADAMTS13 ADAM metallopeptidase with thrombospondin type 1 motif, 13
ADAR adenosine deaminase, RNA-specific
ADCK3 aarF domain containing kinase 3
ADSS adenylosuccinate synthase
AGAP4 ArfGAP with GTPase domain, ankyrin repeat and PH domain 4
AHCTF1 AT hook containing transcription factor 1
AHSA2 AHA1, activator of heat shock 90kDa protein ATPase homolog 2 (yeast)
ALG11 ALG11, alpha-1,2-mannosyltransferase
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
AMD1 adenosylmethionine decarboxylase 1
ANKMY1 ankyrin repeat and MYND domain containing 1
ANKRD10 ankyrin repeat domain 10
ANKRD13A ankyrin repeat domain 13A
ANKRD45 ankyrin repeat domain 45
ANKRD46 ankyrin repeat domain 46
ANKS6 ankyrin repeat and sterile alpha motif domain containing 6
ANKZF1 ankyrin repeat and zinc finger domain containing 1
ARFGEF1 ADP-ribosylation factor guanine nucleotide-exchange factor 1 (brefeldin A-inhibited)
ARGLU1 arginine and glutamate rich 1
ARL17A ADP-ribosylation factor-like 17A
ARL17B ADP-ribosylation factor-like 17B
ARRDC2 arrestin domain containing 2
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ATP2B4 ATPase, Ca++ transporting, plasma membrane 4
ATP6V1C1 ATPase, H+ transporting, lysosomal 42kDa, V1 subunit C1
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2
AVPR2 arginine vasopressin receptor 2
AZIN1 antizyme inhibitor 1
BAALC brain and acute leukemia, cytoplasmic
BAHCC1 BAH domain and coiled-coil containing 1
BANF2 barrier to autointegration factor 2
BHLHE22 basic helix-loop-helix family, member e22
BLZF1 basic leucine zipper nuclear factor 1
BMF Bcl2 modifying factor
BORA bora, aurora kinase A activator
BREA2 breast cancer estrogen-induced apoptosis 2
BST2 bone marrow stromal cell antigen 2
BZRAP1 benzodiazepine receptor (peripheral) associated protein 1
C10ORF107 chromosome 10 open reading frame 107
C10ORF111 chromosome 10 open reading frame 111
C1ORF131 chromosome 1 open reading frame 131
C1ORF204 chromosome 1 open reading frame 204
C1ORF220 chromosome 1 open reading frame 220
C1ORF27 chromosome 1 open reading frame 27
C1QTNF6 C1q and tumor necrosis factor related protein 6
C2ORF72 chromosome 2 open reading frame 72
C2ORF76 chromosome 2 open reading frame 76
C3ORF62 chromosome 3 open reading frame 62
C8ORF33 chromosome 8 open reading frame 33
C8ORF44 chromosome 8 open reading frame 44
C8ORF76 chromosome 8 open reading frame 76
C9ORF40 chromosome 9 open reading frame 40
CAB39L calcium binding protein 39-like
CALML6 calmodulin-like 6
CAPRIN2 caprin family member 2
CARKD carbohydrate kinase domain containing
CBWD6 COBW domain containing 6
CCDC122 coiled-coil domain containing 122
CCDC14 coiled-coil domain containing 14
CCDC144A coiled-coil domain containing 144A
CCDC144B coiled-coil domain containing 144B (pseudogene)
CCDC144CP coiled-coil domain containing 144C, pseudogene
CCDC51 coiled-coil domain containing 51
CCDC7 coiled-coil domain containing 7
CCDC74A coiled-coil domain containing 74A
CCNL2 cyclin L2
CCR3 chemokine (C-C motif) receptor 3
CD36 CD36 molecule (thrombospondin receptor)
CDADC1 cytidine and dCMP deaminase domain containing 1
CDK20 cyclin-dependent kinase 20
CENPJ centromere protein J
CERS2 ceramide synthase 2
CFAP44 cilia and flagella associated protein 44
CHRNE cholinergic receptor, nicotinic, epsilon (muscle)
CHTOP chromatin target of PRMT1
CLC Charcot-Leyden crystal galectin
CLK2 CDC-like kinase 2
CLPSL1 colipase-like 1
CLPSL2 colipase-like 2
CLRN2 clarin 2
CLTCL1 clathrin, heavy chain-like 1
CLUL1 clusterin-like 1 (retinal)
CNST consortin, connexin sorting protein
COG3 component of oligomeric golgi complex 3
COL16A1 collagen, type XVI, alpha 1
COPS5 COP9 signalosome subunit 5
CSN1S2AP casein alpha s2-like A, pseudogene
CSPG4P2Y chondroitin sulfate proteoglycan 4 pseudogene 2, Y-linked
CSPP1 centrosome and spindle pole associated protein 1
CYGB cytoglobin
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DCAF13 DDB1 and CUL4 associated factor 13
DCST2 DC-STAMP domain containing 2
DDX59 DEAD (Asp-Glu-Ala-Asp) box polypeptide 59
DERL1 derlin 1
DFNB59 deafness, autosomal recessive 59
DIEXF digestive organ expansion factor homolog (zebrafish)
DLEC1 deleted in lung and esophageal cancer 1
DNAH14 dynein, axonemal, heavy chain 14
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNM1P35 dynamin 1 pseudogene 35
DUSP9 dual specificity phosphatase 9
EFNA1 ephrin-A1
EGFL7 EGF-like-domain, multiple 7
EMC2 ER membrane protein complex subunit 2
ENOX1 ecto-NOX disulfide-thiol exchanger 1
ENY2 enhancer of yellow 2 homolog (Drosophila)
ETNK2 ethanolamine kinase 2
ETS2 v-ets avian erythroblastosis virus E26 oncogene homolog 2
EXD1 exonuclease 3'-5' domain containing 1
F11 coagulation factor XI
FAM106CP family with sequence similarity 106, member C, pseudogene
FAM167A-AS1 FAM167A antisense RNA 1
FAM90A7P putative protein FAM90A7
FAM91A1 family with sequence similarity 91, member A1
FAM95B1 family with sequence similarity 95, member B1
FANK1 fibronectin type III and ankyrin repeat domains 1
FBXO41 F-box protein 41
FERD3L Fer3-like bHLH transcription factor
FEV FEV (ETS oncogene family)
FFAR3 free fatty acid receptor 3
FGF16 fibroblast growth factor 16
FIGNL2 fidgetin-like 2
FLJ42627 uncharacterized LOC645644
FNDC7 fibronectin type III domain containing 7
GHRHR growth hormone releasing hormone receptor
GIPC3 GIPC PDZ domain containing family, member 3
GNB3 guanine nucleotide binding protein (G protein), beta polypeptide 3
GNRHR2 gonadotropin-releasing hormone (type 2) receptor 2, pseudogene
GOLGA6L5P golgin A6 family-like 5, pseudogene
GOLGA8B golgin A8 family, member B
GOLGA8CP golgin A8 family, member C, pseudogene
GOLPH3L golgi phosphoprotein 3-like
GORAB golgin, RAB6-interacting
GPR6 G protein-coupled receptor 6
GPR89A G protein-coupled receptor 89A
GPR89B G protein-coupled receptor 89B
GPSM1 G-protein signaling modulator 1
GRTP1 growth hormone regulated TBC protein 1
GSTM1 glutathione S-transferase mu 1
GSTM2 glutathione S-transferase mu 2 (muscle)
GSTTP2 glutathione S-transferase theta pseudogene 2
GZMM granzyme M (lymphocyte met-ase 1)
H1FNT H1 histone family, member N, testis-specific
H1FX-AS1 H1FX antisense RNA 1
HHATL hedgehog acyltransferase-like
HLX H2.0-like homeobox
HNRNPU-AS1 HNRNPU antisense RNA 1
HORMAD1 HORMA domain containing 1
HOTAIR HOX transcript antisense RNA
HOXC12 homeobox C12
HPN hepsin
HYAL1 hyaluronoglucosaminidase 1
IBA57 IBA57, iron-sulfur cluster assembly homolog (S. cerevisiae)
IFI44 interferon-induced protein 44
IFI44L interferon-induced protein 44-like
IFNA5 interferon, alpha 5
IFT140 intraflagellar transport 140
IFT88 intraflagellar transport 88
IL6R interleukin 6 receptor
INTS8 integrator complex subunit 8
IRAK3 interleukin-1 receptor-associated kinase 3
JRK Jrk homolog (mouse)
KAT2A K(lysine) acetyltransferase 2A
KCNQ1OT1 KCNQ1 opposite strand/antisense transcript 1 (non-protein coding)
KCTD3 potassium channel tetramerization domain containing 3
KIAA0196 KIAA0196
KIAA0907 KIAA0907
KIAA1407 KIAA1407
KIAA1429 KIAA1429
KIAA1614 KIAA1614
KLHL12 kelch-like family member 12
KLKB1 kallikrein B, plasma (Fletcher factor) 1
KLRAP1 killer cell lectin-like receptor subfamily A pseudogene 1
L3MBTL1 l(3)mbt-like 1 (Drosophila)
LCNL1 lipocalin-like 1
LEMD1 LEM domain containing 1
LENG8 leukocyte receptor cluster (LRC) member 8
LINC00159 long intergenic non-protein coding RNA 159
LINC00202-1 long intergenic non-protein coding RNA 202-1
LINC00310 long intergenic non-protein coding RNA 310
LINC00476 long intergenic non-protein coding RNA 476
LOC100130872 uncharacterized LOC100130872
LOC100133669 uncharacterized LOC100133669
LOC150776 sphingomyelin phosphodiesterase 4, neutral membrane (neutral sphingomyelinase-3) pseudogene
LOC286367
LOC401463 uncharacterized LOC401463
LOC729609 uncharacterized LOC729609
LPAR6 lysophosphatidic acid receptor 6
LPIN3 lipin 3
LRIT3 leucine-rich repeat, immunoglobulin-like and transmembrane domains 3
LRRC24 leucine rich repeat containing 24
LRRC6 leucine rich repeat containing 6
LRRC66 leucine rich repeat containing 66
LRRCC1 leucine rich repeat and coiled-coil centrosomal protein 1
LY6E lymphocyte antigen 6 complex, locus E
LYPLAL1 lysophospholipase-like 1
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAP3K12 mitogen-activated protein kinase kinase kinase 12
MAPK15 mitogen-activated protein kinase 15
MASP2 mannan-binding lectin serine peptidase 2
MDM4 MDM4, p53 regulator
MED30 mediator complex subunit 30
MED4 mediator complex subunit 4
MEF2A myocyte enhancer factor 2A
METTL18 methyltransferase like 18
MFAP2 microfibrillar-associated protein 2
MFSD7 major facilitator superfamily domain containing 7
MIR17HG miR-17-92 cluster host gene
MMAA methylmalonic aciduria (cobalamin deficiency) cblA type
MMEL1 membrane metallo-endopeptidase-like 1
MPHOSPH8 M-phase phosphoprotein 8
MPP3 membrane protein, palmitoylated 3 (MAGUK p55 subfamily member 3)
MR1 major histocompatibility complex, class I-related
MROH7 maestro heat-like repeat family member 7
MRPL13 mitochondrial ribosomal protein L13
MST1P2 macrophage stimulating 1 (hepatocyte growth factor-like) pseudogene 2
MSTO2P misato family member 2, pseudogene
MTBP MDM2 binding protein
MTDH metadherin
MTERF2 mitochondrial transcription termination factor 2
MTERF3 mitochondrial transcription termination factor 3
MTRF1 mitochondrial translational release factor 1
MTVR2 mouse mammary tumor virus receptor homolog 2
MYCBPAP MYCBP associated protein
N4BP2L1 NEDD4 binding protein 2-like 1
N4BP2L2 NEDD4 binding protein 2-like 2
N4BP2L2-IT2 N4BPL2 intronic transcript 2
N6AMT2 N-6 adenine-specific DNA methyltransferase 2 (putative)
NAV1 neuron navigator 1
NBPF10 neuroblastoma breakpoint family, member 10
NBPF15 neuroblastoma breakpoint family, member 15
NBPF22P neuroblastoma breakpoint family, member 22, pseudogene
NBPF6 neuroblastoma breakpoint family, member 6
NDRG1 N-myc downstream regulated 1
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NEK3 NIMA-related kinase 3
NEUROG2 neurogenin 2
NIPAL2 NIPA-like domain containing 2
NIPSNAP3A nipsnap homolog 3A (C. elegans)
NPHS2 nephrosis 2, idiopathic, steroid-resistant (podocin)
NRBP2 nuclear receptor binding protein 2
NSMAF neutral sphingomyelinase (N-SMase) activation associated factor
NSUN6 NOP2/Sun domain family, member 6
NUDCD1 NudC domain containing 1
NYAP1 neuronal tyrosine-phosphorylated phosphoinositide-3-kinase adaptor 1
OASL 2'-5'-oligoadenylate synthetase-like
OBSCN obscurin, cytoskeletal calmodulin and titin-interacting RhoGEF
OR11H6 olfactory receptor, family 11, subfamily H, member 6
OR2A5 olfactory receptor, family 2, subfamily A, member 5
OR2K2 olfactory receptor, family 2, subfamily K, member 2
OR5B21 olfactory receptor, family 5, subfamily B, member 21
OR6W1P olfactory receptor, family 6, subfamily W, member 1 pseudogene
OTUD3 OTU deubiquitinase 3
OXR1 oxidation resistance 1
PARP10 poly (ADP-ribose) polymerase family, member 10
PCDHGB7 protocadherin gamma subfamily B, 7
PCMTD1 protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 1
PDZK1P1 PDZ domain containing 1 pseudogene 1
PEX2 peroxisomal biogenesis factor 2
PGM2 phosphoglucomutase 2
PHF20L1 PHD finger protein 20-like 1
PIEZO2 piezo-type mechanosensitive ion channel component 2
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PNPLA7 patatin-like phospholipase domain containing 7
POGLUT1 protein O-glucosyltransferase 1
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
POP1 processing of precursor 1, ribonuclease P/MRP subunit (S. cerevisiae)
PP14571 uncharacterized LOC100130449
PPAPDC3 phosphatidic acid phosphatase type 2 domain containing 3
PPFIA4 protein tyrosine phosphatase, receptor type, f polypeptide (PTPRF), interacting protein (liprin), alpha 4
PPIEL peptidylprolyl isomerase E-like pseudogene
PRCD progressive rod-cone degeneration
PRDM14 PR domain containing 14
PRKAG3 protein kinase, AMP-activated, gamma 3 non-catalytic subunit
PRKY protein kinase, Y-linked, pseudogene
PRO0611 PRO0611 protein
PRPF3 pre-mRNA processing factor 3
PRR25 proline rich 25
PRSS33 protease, serine, 33
PTDSS1 phosphatidylserine synthase 1
PTK2 protein tyrosine kinase 2
PTP4A3 protein tyrosine phosphatase type IVA, member 3
PUF60 poly-U binding splicing factor 60KDa
PVT1 Pvt1 oncogene (non-protein coding)
RAD54B RAD54 homolog B (S. cerevisiae)
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASA3 RAS p21 protein activator 3
RBBP6 retinoblastoma binding protein 6
RBM5 RNA binding motif protein 5
RBM8A RNA binding motif protein 8A
RFWD2 ring finger and WD repeat domain 2, E3 ubiquitin protein ligase
RFXAP regulatory factor X-associated protein
RGS20 regulator of G-protein signaling 20
RMDN1 regulator of microtubule dynamics 1
RNF139 ring finger protein 139
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNF219 ring finger protein 219
RORC RAR-related orphan receptor C
RPS10P7 ribosomal protein S10 pseudogene 7
RRN3P1 RNA polymerase I transcription factor homolog (S. cerevisiae) pseudogene 1
RTN2 reticulon 2
RUSC1-AS1 RUSC1 antisense RNA 1
SACS sacsin molecular chaperone
SAXO2 stabilizer of axonemal microtubules 2
SCFD2 sec1 family domain containing 2
SCYL3 SCY1-like 3 (S. cerevisiae)
SDCBP syndecan binding protein (syntenin)
SDCCAG8 serologically defined colon cancer antigen 8
SECISBP2 SECIS binding protein 2
SEPT7P2 septin 7 pseudogene 2
SERP2 stress-associated endoplasmic reticulum protein family member 2
SGK3 serum/glucocorticoid regulated kinase family, member 3
SHISA2 shisa family member 2
SIM2 single-minded family bHLH transcription factor 2
SLC10A5 solute carrier family 10, member 5
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
SLC25A32 solute carrier family 25 (mitochondrial folate carrier), member 32
SLC25A34 solute carrier family 25, member 34
SLC25A51P1 solute carrier family 25, member 51 pseudogene 1
SMYD3 SET and MYND domain containing 3
SNAI2 snail family zinc finger 2
SNCG synuclein, gamma (breast cancer-specific protein 1)
SNORA70 small nucleolar RNA, H/ACA box 70
SNORA71E small nucleolar RNA, H/ACA box 71E
SPACA6P sperm acrosome associated 6, pseudogene
SPIDR scaffolding protein involved in DNA repair
SPON2 spondin 2, extracellular matrix protein
SPP1 secreted phosphoprotein 1
SRMS src-related kinase lacking C-terminal regulatory tyrosine and N-terminal myristylation sites
SRSF11 serine/arginine-rich splicing factor 11
ST20 suppressor of tumorigenicity 20
ST3GAL1 ST3 beta-galactoside alpha-2,3-sialyltransferase 1
STK24 serine/threonine kinase 24
STK3 serine/threonine kinase 3
STKLD1 serine/threonine kinase-like domain containing 1
STOM stomatin
SULT1A1 sulfotransferase family, cytosolic, 1A, phenol-preferring, member 1
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SWT1 SWT1 RNA endoribonuclease homolog (S. cerevisiae)
TAF2 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 150kDa
TAF5L TAF5-like RNA polymerase II, p300/CBP-associated factor (PCAF)-associated factor, 65kDa
TARBP1 TAR (HIV-1) RNA binding protein 1
TAS2R14 taste receptor, type 2, member 14
TAS2R9 taste receptor, type 2, member 9
TATDN2 TatD DNase domain containing 2
TBC1D31 TBC1 domain family, member 31
TCEA1 transcription elongation factor A (SII), 1
TCEA3 transcription elongation factor A (SII), 3
TEAD2 TEA domain family member 2
TERF1 telomeric repeat binding factor (NIMA-interacting) 1
TFB2M transcription factor B2, mitochondrial
TGDS TDP-glucose 4,6-dehydratase
TGFB2 transforming growth factor, beta 2
TGS1 trimethylguanosine synthase 1
THEM4 thioesterase superfamily member 4
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast)
TIPRL TOR signaling pathway regulator
TMCO1 transmembrane and coiled-coil domains 1
TMEM105 transmembrane protein 105
TMEM183A transmembrane protein 183A
TMEM55A transmembrane protein 55A
TMEM68 transmembrane protein 68
TMEM82 transmembrane protein 82
TMEM87A transmembrane protein 87A
TMEM9 transmembrane protein 9
TOP1MT topoisomerase (DNA) I, mitochondrial
TPTE2P1 transmembrane phosphoinositide 3-phosphatase and tensin homolog 2 pseudogene 1
TRIB1 tribbles pseudokinase 1
TRIM13 tripartite motif containing 13
TRIM14 tripartite motif containing 14
TRIM69 tripartite motif containing 69
TRMT10A tRNA methyltransferase 10 homolog A (S. cerevisiae)
TRMT12 tRNA methyltransferase 12 homolog (S. cerevisiae)
TRPM6 transient receptor potential cation channel, subfamily M, member 6
TSNARE1 t-SNARE domain containing 1
TSSK3 testis-specific serine kinase 3
TTLL3 tubulin tyrosine ligase-like family member 3
TTPA tocopherol (alpha) transfer protein
TTTY10 testis-specific transcript, Y-linked 10 (non-protein coding)
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
TXLNGY taxilin gamma pseudogene, Y-linked
UBE2Q1 ubiquitin-conjugating enzyme E2Q family member 1
UBE2V2 ubiquitin-conjugating enzyme E2 variant 2
UGGT2 UDP-glucose glycoprotein glucosyltransferase 2
UNC13A unc-13 homolog A (C. elegans)
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
USPL1 ubiquitin specific peptidase like 1
UTP23 UTP23, small subunit (SSU) processome component, homolog (yeast)
VAMP4 vesicle-associated membrane protein 4
VN1R5 vomeronasal 1 receptor 5 (gene/pseudogene)
VPS13B vacuolar protein sorting 13 homolog B (yeast)
VPS45 vacuolar protein sorting 45 homolog (S. cerevisiae)
VSTM2B V-set and transmembrane domain containing 2B
WDR37 WD repeat domain 37
WDR6 WD repeat domain 6
WDR93 WD repeat domain 93
WNT6 wingless-type MMTV integration site family, member 6
YOD1 YOD1 deubiquitinase
ZC2HC1A zinc finger, C2HC-type containing 1A
ZC3H11A zinc finger CCCH-type containing 11A
ZCWPW2 zinc finger, CW type with PWWP domain 2
ZFP41 ZFP41 zinc finger protein
ZHX1 zinc fingers and homeoboxes 1
ZIC4 Zic family member 4
ZNF124 zinc finger protein 124
ZNF169 zinc finger protein 169
ZNF25 zinc finger protein 25
ZNF250 zinc finger protein 250
ZNF251 zinc finger protein 251
ZNF252P zinc finger protein 252, pseudogene
ZNF280A zinc finger protein 280A
ZNF286B zinc finger protein 286B
ZNF33A zinc finger protein 33A
ZNF517 zinc finger protein 517
ZNF572 zinc finger protein 572
ZNF621 zinc finger protein 621
ZNF623 zinc finger protein 623
ZNF669 zinc finger protein 669
ZNF696 zinc finger protein 696
ZNF7 zinc finger protein 7
ZNF707 zinc finger protein 707
ZNF77 zinc finger protein 77
ZRANB2 zinc finger, RAN-binding domain containing 2

low expression

Symbol Name
DIP2A DIP2 disco-interacting protein 2 homolog A (Drosophila)
PRMT2 protein arginine methyltransferase 2