Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GS-06A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

339 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GS-06A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARD alanine and arginine rich domain containing protein
AATK apoptosis-associated tyrosine kinase
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ACO1 aconitase 1, soluble
ACSS3 acyl-CoA synthetase short-chain family member 3
ADGRB1 adhesion G protein-coupled receptor B1
ADORA3 adenosine A3 receptor
ADPRHL1 ADP-ribosylhydrolase like 1
AGA aspartylglucosaminidase
AIF1L allograft inflammatory factor 1-like
AKIP1 A kinase (PRKA) interacting protein 1
ALAD aminolevulinate dehydratase
ALKBH3 alkB, alkylation repair homolog 3 (E. coli)
AMACR alpha-methylacyl-CoA racemase
AMELY amelogenin, Y-linked
AMZ2 archaelysin family metallopeptidase 2
ANKRD11 ankyrin repeat domain 11
ANKRD40 ankyrin repeat domain 40
ANXA3 annexin A3
ANXA5 annexin A5
APOC2 apolipoprotein C-II
APOC4 apolipoprotein C-IV
APOE apolipoprotein E
APOL2 apolipoprotein L, 2
APTX aprataxin
ARFIP2 ADP-ribosylation factor interacting protein 2
ARHGEF35 Rho guanine nucleotide exchange factor (GEF) 35
ARHGEF5 Rho guanine nucleotide exchange factor (GEF) 5
ARL4A ADP-ribosylation factor-like 4A
ARMC12 armadillo repeat containing 12
ARMC3 armadillo repeat containing 3
ARPC1B actin related protein 2/3 complex, subunit 1B, 41kDa
ASB5 ankyrin repeat and SOCS box containing 5
ASMT acetylserotonin O-methyltransferase
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
BAG1 BCL2-associated athanogene
BDNF-AS BDNF antisense RNA
BET1L Bet1 golgi vesicular membrane trafficking protein-like
BFSP1 beaded filament structural protein 1, filensin
C17ORF105 chromosome 17 open reading frame 105
C17ORF58 chromosome 17 open reading frame 58
C2ORF71 chromosome 2 open reading frame 71
C6ORF52 chromosome 6 open reading frame 52
C7ORF31 chromosome 7 open reading frame 31
C9ORF106 chromosome 9 open reading frame 106
C9ORF24 chromosome 9 open reading frame 24
C9ORF64 chromosome 9 open reading frame 64
CA12 carbonic anhydrase XII
CA8 carbonic anhydrase VIII
CARD14 caspase recruitment domain family, member 14
CCDC163P coiled-coil domain containing 163, pseudogene
CD59 CD59 molecule, complement regulatory protein
CDH1 cadherin 1, type 1, E-cadherin (epithelial)
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CDRT15 CMT1A duplicated region transcript 15
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CHMP5 charged multivesicular body protein 5
CHRM4 cholinergic receptor, muscarinic 4
CLTCL1 clathrin, heavy chain-like 1
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNBD1 cyclic nucleotide binding domain containing 1
CNDP1 carnosine dipeptidase 1 (metallopeptidase M20 family)
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family)
CNP 2',3'-cyclic nucleotide 3' phosphodiesterase
COG1 component of oligomeric golgi complex 1
COL28A1 collagen, type XXVIII, alpha 1
COPZ1 coatomer protein complex, subunit zeta 1
COPZ2 coatomer protein complex, subunit zeta 2
COQ5 coenzyme Q5 homolog, methyltransferase (S. cerevisiae)
COX19 COX19 cytochrome c oxidase assembly factor
COX6C cytochrome c oxidase subunit VIc
CSN1S2AP casein alpha s2-like A, pseudogene
CSTF3 cleavage stimulation factor, 3' pre-RNA, subunit 3, 77kDa
CTF1 cardiotrophin 1
CUX1 cut-like homeobox 1
CXORF58 chromosome X open reading frame 58
CXXC4 CXXC finger protein 4
CYB5R2 cytochrome b5 reductase 2
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DACT1 dishevelled-binding antagonist of beta-catenin 1
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DCAF12 DDB1 and CUL4 associated factor 12
DDIT4L DNA-damage-inducible transcript 4-like
DDO D-aspartate oxidase
DEF8 differentially expressed in FDCP 8 homolog (mouse)
DENND5A DENN/MADD domain containing 5A
DERL1 derlin 1
DHRS11 dehydrogenase/reductase (SDR family) member 11
DIP2C DIP2 disco-interacting protein 2 homolog C (Drosophila)
DNAJA1 DnaJ (Hsp40) homolog, subfamily A, member 1
DNAJB5 DnaJ (Hsp40) homolog, subfamily B, member 5
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNHD1 dynein heavy chain domain 1
DPRXP4 divergent-paired related homeobox pseudogene 4
DTNA dystrobrevin, alpha
DUSP23 dual specificity phosphatase 23
DYNLL2 dynein, light chain, LC8-type 2
EIF3B eukaryotic translation initiation factor 3, subunit B
EMC8 ER membrane protein complex subunit 8
ENC1 ectodermal-neural cortex 1 (with BTB domain)
ENO3 enolase 3 (beta, muscle)
ESR1 estrogen receptor 1
ESRRG estrogen-related receptor gamma
FABP7 fatty acid binding protein 7, brain
FAHD2B fumarylacetoacetate hydrolase domain containing 2B
FAM105A family with sequence similarity 105, member A
FAM129A family with sequence similarity 129, member A
FAM180B family with sequence similarity 180, member B
FAM84B family with sequence similarity 84, member B
FAM95B1 family with sequence similarity 95, member B1
FBXO3 F-box protein 3
FBXO36 F-box protein 36
FGF20 fibroblast growth factor 20
FNTB farnesyltransferase, CAAX box, beta
FSCN3 fascin actin-bundling protein 3, testicular
GAA glucosidase, alpha; acid
GAS8 growth arrest-specific 8
GAS8-AS1 GAS8 antisense RNA 1
GFRA3 GDNF family receptor alpha 3
GGT1 gamma-glutamyltransferase 1
GGT3P gamma-glutamyltransferase 3 pseudogene
GGTLC1 gamma-glutamyltransferase light chain 1
GGTLC2 gamma-glutamyltransferase light chain 2
GMPR2 guanosine monophosphate reductase 2
GSTZ1 glutathione S-transferase zeta 1
GUCA2A guanylate cyclase activator 2A (guanylin)
HARBI1 harbinger transposase derived 1
HEXIM2 hexamethylene bis-acetamide inducible 2
HHATL hedgehog acyltransferase-like
HOXA3 homeobox A3
HOXA4 homeobox A4
HOXD1 homeobox D1
HRCT1 histidine rich carboxyl terminus 1
HRSP12 heat-responsive protein 12
HTN1 histatin 1
ICT1 immature colon carcinoma transcript 1
IDNK idnK, gluconokinase homolog (E. coli)
INF2 inverted formin, FH2 and WH2 domain containing
INSC inscuteable homolog (Drosophila)
IQCK IQ motif containing K
IRF2BPL interferon regulatory factor 2 binding protein-like
ITGA7 integrin, alpha 7
ITPR1 inositol 1,4,5-trisphosphate receptor, type 1
KBTBD4 kelch repeat and BTB (POZ) domain containing 4
KCNH5 potassium channel, voltage gated eag related subfamily H, member 5
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KCNJ2 potassium channel, inwardly rectifying subfamily J, member 2
KCNJ9 potassium channel, inwardly rectifying subfamily J, member 9
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KCNS3 potassium voltage-gated channel, modifier subfamily S, member 3
KCTD2 potassium channel tetramerization domain containing 2
KHDC1 KH homology domain containing 1
KIAA1161 KIAA1161
KIF24 kinesin family member 24
KIF6 kinesin family member 6
KLHDC8A kelch domain containing 8A
LDHC lactate dehydrogenase C
LEMD1 LEM domain containing 1
LGALS3BP lectin, galactoside-binding, soluble, 3 binding protein
LIPF lipase, gastric
LIPJ lipase, family member J
LMNTD2 lamin tail domain containing 2
LOC286359 uncharacterized LOC286359
LOC441204 uncharacterized LOC441204
LOC646762 uncharacterized LOC646762
LONRF2 LON peptidase N-terminal domain and ring finger 2
LRRC4 leucine rich repeat containing 4
LRRC59 leucine rich repeat containing 59
LRRC74A leucine rich repeat containing 74A
LRRTM1 leucine rich repeat transmembrane neuronal 1
LYZL1 lysozyme-like 1
MAF v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog
MAGEB1 melanoma antigen family B1
MAGEB2 melanoma antigen family B2
MATN2 matrilin 2
MC3R melanocortin 3 receptor
ME1 malic enzyme 1, NADP(+)-dependent, cytosolic
MED9 mediator complex subunit 9
MEGF9 multiple EGF-like-domains 9
MEIG1 meiosis/spermiogenesis associated 1
MERTK MER proto-oncogene, tyrosine kinase
METTL23 methyltransferase like 23
MIF4GD MIF4G domain containing
MKS1 Meckel syndrome, type 1
MRAP2 melanocortin 2 receptor accessory protein 2
MRPL10 mitochondrial ribosomal protein L10
MRPL13 mitochondrial ribosomal protein L13
MTHFSD methenyltetrahydrofolate synthetase domain containing
MUC7 mucin 7, secreted
MYCBPAP MYCBP associated protein
MYL4 myosin, light chain 4, alkali; atrial, embryonic
NDUFA4 NDUFA4, mitochondrial complex associated
NDUFB6 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 6, 17kDa
NDUFS3 NADH dehydrogenase (ubiquinone) Fe-S protein 3, 30kDa (NADH-coenzyme Q reductase)
NFE2L1 nuclear factor, erythroid 2-like 1
NFX1 nuclear transcription factor, X-box binding 1
NLRP14 NLR family, pyrin domain containing 14
NMT1 N-myristoyltransferase 1
NOD1 nucleotide-binding oligomerization domain containing 1
NOL6 nucleolar protein 6 (RNA-associated)
NPW neuropeptide W
NT5DC3 5'-nucleotidase domain containing 3
NUDT16P1 nudix (nucleoside diphosphate linked moiety X)-type motif 16 pseudogene 1
NUDT2 nudix (nucleoside diphosphate linked moiety X)-type motif 2
NUDT7 nudix (nucleoside diphosphate linked moiety X)-type motif 7
NUP160 nucleoporin 160kDa
NUP85 nucleoporin 85kDa
NXNL1 nucleoredoxin-like 1
OLFML2A olfactomedin-like 2A
OLR1 oxidized low density lipoprotein (lectin-like) receptor 1
OPHN1 oligophrenin 1
OR1J1 olfactory receptor, family 1, subfamily J, member 1
OR1J2 olfactory receptor, family 1, subfamily J, member 2
OR1L1 olfactory receptor, family 1, subfamily L, member 1
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR6A2 olfactory receptor, family 6, subfamily A, member 2
OR8D2 olfactory receptor, family 8, subfamily D, member 2 (gene/pseudogene)
PADI2 peptidyl arginine deiminase, type II
PATL2 protein associated with topoisomerase II homolog 2 (yeast)
PDSS2 prenyl (decaprenyl) diphosphate synthase, subunit 2
PDZD9 PDZ domain containing 9
PGF placental growth factor
PHB prohibitin
PHLDA3 pleckstrin homology-like domain, family A, member 3
PKIB protein kinase (cAMP-dependent, catalytic) inhibitor beta
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLEKHH1 pleckstrin homology domain containing, family H (with MyTH4 domain) member 1
POLR2K polymerase (RNA) II (DNA directed) polypeptide K, 7.0kDa
PON3 paraoxonase 3
POU5F1B POU class 5 homeobox 1B
PPP1R3C protein phosphatase 1, regulatory subunit 3C
PPP1R42 protein phosphatase 1, regulatory subunit 42
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PRDX6 peroxiredoxin 6
PROS1 protein S (alpha)
PRPSAP1 phosphoribosyl pyrophosphate synthetase-associated protein 1
PSAT1 phosphoserine aminotransferase 1
PTGR2 prostaglandin reductase 2
PTPMT1 protein tyrosine phosphatase, mitochondrial 1
PTPRB protein tyrosine phosphatase, receptor type, B
PTPRR protein tyrosine phosphatase, receptor type, R
QRICH2 glutamine rich 2
RAC1 ras-related C3 botulinum toxin substrate 1 (rho family, small GTP binding protein Rac1)
RAP2B RAP2B, member of RAS oncogene family
RCAN2 regulator of calcineurin 2
RIC8A RIC8 guanine nucleotide exchange factor A
RNASE1 ribonuclease, RNase A family, 1 (pancreatic)
RNF139 ring finger protein 139
RNF19A ring finger protein 19A, RBR E3 ubiquitin protein ligase
RNPEP arginyl aminopeptidase (aminopeptidase B)
RPGRIP1 retinitis pigmentosa GTPase regulator interacting protein 1
RPS26P11 ribosomal protein S26 pseudogene 11
RTKN rhotekin
SCD5 stearoyl-CoA desaturase 5
SDC4P syndecan 4 pseudogene
SDSL serine dehydratase-like
SEC14L3 SEC14-like 3 (S. cerevisiae)
SEC14L4 SEC14-like 4 (S. cerevisiae)
SERPINA5 serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5
SHISA4 shisa family member 4
SIAE sialic acid acetylesterase
SIRT3 sirtuin 3
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
SLC15A2 solute carrier family 15 (oligopeptide transporter), member 2
SLC22A17 solute carrier family 22, member 17
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2
SLC39A6 solute carrier family 39 (zinc transporter), member 6
SLC45A2 solute carrier family 45, member 2
SLC46A3 solute carrier family 46, member 3
SLC7A5 solute carrier family 7 (amino acid transporter light chain, L system), member 5
SLITRK2 SLIT and NTRK-like family, member 2
SMG8 SMG8 nonsense mediated mRNA decay factor
SMPX small muscle protein, X-linked
SMU1 smu-1 suppressor of mec-8 and unc-52 homolog (C. elegans)
SMYD1 SET and MYND domain containing 1
SNAR-G1 small ILF3/NF90-associated RNA G1
SNF8 SNF8, ESCRT-II complex subunit
SNORA44 small nucleolar RNA, H/ACA box 44
SNORA71C small nucleolar RNA, H/ACA box 71C
SNORA9 small nucleolar RNA, H/ACA box 9
SNX18 sorting nexin 18
SP2 Sp2 transcription factor
SPAG1 sperm associated antigen 1
SPATA32 spermatogenesis associated 32
SPATA4 spermatogenesis associated 4
SPERT spermatid associated
SPX spexin hormone
SQRDL sulfide quinone reductase-like (yeast)
SRD5A3 steroid 5 alpha-reductase 3
SRP68 signal recognition particle 68kDa
SSUH2 ssu-2 homolog (C. elegans)
STH saitohin
STK16 serine/threonine kinase 16
SUGT1P1 SUGT1 pseudogene 1
SUPT4H1 suppressor of Ty 4 homolog 1 (S. cerevisiae)
SVIL supervillin
TACO1 translational activator of mitochondrially encoded cytochrome c oxidase I
TBC1D10A TBC1 domain family, member 10A
TBC1D8 TBC1 domain family, member 8 (with GRAM domain)
TCAP titin-cap
TEX2 testis expressed 2
TEX33 testis expressed 33
TIMM17A translocase of inner mitochondrial membrane 17 homolog A (yeast)
TKT transketolase
TMEM101 transmembrane protein 101
TMEM104 transmembrane protein 104
TMEM116 transmembrane protein 116
TMEM150C transmembrane protein 150C
TMEM176A transmembrane protein 176A
TMEM176B transmembrane protein 176B
TMEM229B transmembrane protein 229B
TMEM242 transmembrane protein 242
TMEM27 transmembrane protein 27
TMEM9B TMEM9 domain family, member B
TMUB2 transmembrane and ubiquitin-like domain containing 2
TOB1 transducer of ERBB2, 1
TOMM7 translocase of outer mitochondrial membrane 7 homolog (yeast)
TOPORS topoisomerase I binding, arginine/serine-rich, E3 ubiquitin protein ligase
TRIM21 tripartite motif containing 21
TRIM34 tripartite motif containing 34
TRIM6 tripartite motif containing 6
TRIM68 tripartite motif containing 68
TRPS1 trichorhinophalangeal syndrome I
TTC7B tetratricopeptide repeat domain 7B
TTTY14 testis-specific transcript, Y-linked 14 (non-protein coding)
UBAP1 ubiquitin associated protein 1
UBAP2 ubiquitin associated protein 2
UBE2R2 ubiquitin-conjugating enzyme E2R 2
UCN urocortin
ULK4P2 ULK4 pseudogene 2
UNK unkempt family zinc finger
USP30 ubiquitin specific peptidase 30
VAV3 vav 3 guanine nucleotide exchange factor
WDYHV1 WDYHV motif containing 1
ZMYND12 zinc finger, MYND-type containing 12

low expression

Symbol Name
BSDC1 BSD domain containing 1
SRSF4 serine/arginine-rich splicing factor 4