Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GL-06A-11R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

358 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A5GL-06A-11R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD11-AS1 ABHD11 antisense RNA 1 (tail to tail)
ACBD7 acyl-CoA binding domain containing 7
ACOT6 acyl-CoA thioesterase 6
ACPT acid phosphatase, testicular
ACTL7A actin-like 7A
ACTR6 ARP6 actin-related protein 6 homolog (yeast)
ACVR1C activin A receptor, type IC
ACYP1 acylphosphatase 1, erythrocyte (common) type
AHNAK2 AHNAK nucleoprotein 2
AKIP1 A kinase (PRKA) interacting protein 1
AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase)
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ALG10B ALG10B, alpha-1,2-glucosyltransferase
ALK anaplastic lymphoma receptor tyrosine kinase
ALKBH2 alkB, alkylation repair homolog 2 (E. coli)
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
ANAPC7 anaphase promoting complex subunit 7
ANG angiogenin, ribonuclease, RNase A family, 5
ANGPTL3 angiopoietin-like 3
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA2P3 annexin A2 pseudogene 3
AP1S3 adaptor-related protein complex 1, sigma 3 subunit
APBB1 amyloid beta (A4) precursor protein-binding, family B, member 1 (Fe65)
APLF aprataxin and PNKP like factor
ARHGEF9 Cdc42 guanine nucleotide exchange factor (GEF) 9
ARL2BP ADP-ribosylation factor-like 2 binding protein
ARPC3 actin related protein 2/3 complex, subunit 3, 21kDa
ARSI arylsulfatase family, member I
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
ATP8B5P ATPase, class I, type 8B, member 5, pseudogene
AVEN apoptosis, caspase activation inhibitor
B3GAT1 beta-1,3-glucuronyltransferase 1
BAMBI BMP and activin membrane-bound inhibitor
BCAT2 branched chain amino-acid transaminase 2, mitochondrial
BCL2A1 BCL2-related protein A1
BLOC1S2 biogenesis of lysosomal organelles complex-1, subunit 2
BLVRA biliverdin reductase A
BPHL biphenyl hydrolase-like (serine hydrolase)
BRSK2 BR serine/threonine kinase 2
BTG4 B-cell translocation gene 4
C10ORF11 chromosome 10 open reading frame 11
C10ORF35 chromosome 10 open reading frame 35
C10ORF88 chromosome 10 open reading frame 88
C12ORF60 chromosome 12 open reading frame 60
C14ORF1 chromosome 14 open reading frame 1
C16ORF46 chromosome 16 open reading frame 46
C1ORF141 chromosome 1 open reading frame 141
C2ORF72 chromosome 2 open reading frame 72
C2ORF78 chromosome 2 open reading frame 78
C3ORF14 chromosome 3 open reading frame 14
C4ORF45 chromosome 4 open reading frame 45
C5ORF28 chromosome 5 open reading frame 28
CA8 carbonic anhydrase VIII
CALHM1 calcium homeostasis modulator 1
CALM1 calmodulin 1 (phosphorylase kinase, delta)
CAPG capping protein (actin filament), gelsolin-like
CBLN4 cerebellin 4 precursor
CCDC15 coiled-coil domain containing 15
CCDC153 coiled-coil domain containing 153
CCDC53 coiled-coil domain containing 53
CCKBR cholecystokinin B receptor
CCT2 chaperonin containing TCP1, subunit 2 (beta)
CD68 CD68 molecule
CDH15 cadherin 15, type 1, M-cadherin (myotubule)
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CDKN2D cyclin-dependent kinase inhibitor 2D (p19, inhibits CDK4)
CDKN3 cyclin-dependent kinase inhibitor 3
CEMP1 cementum protein 1
CEP170P1 centrosomal protein 170kDa pseudogene 1
CEP55 centrosomal protein 55kDa
CERKL ceramide kinase-like
CFDP1 craniofacial development protein 1
CGREF1 cell growth regulator with EF-hand domain 1
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1
CIB4 calcium and integrin binding family member 4
CIRBP-AS1 CIRBP antisense RNA 1
CISD2 CDGSH iron sulfur domain 2
CLEC11A C-type lectin domain family 11, member A
CMAS cytidine monophosphate N-acetylneuraminic acid synthetase
CMC2 C-x(9)-C motif containing 2
CMTM3 CKLF-like MARVEL transmembrane domain containing 3
COMMD8 COMM domain containing 8
COPS8 COP9 signalosome subunit 8
COQ2 coenzyme Q2 4-hydroxybenzoate polyprenyltransferase
CORO1C coronin, actin binding protein, 1C
CPNE7 copine VII
CPNE8 copine VIII
CPSF2 cleavage and polyadenylation specific factor 2, 100kDa
CREG2 cellular repressor of E1A-stimulated genes 2
CSNK1A1L casein kinase 1, alpha 1-like
CSTB cystatin B (stefin B)
CYB5A cytochrome b5 type A (microsomal)
D2HGDH D-2-hydroxyglutarate dehydrogenase
DBNDD1 dysbindin (dystrobrevin binding protein 1) domain containing 1
DECR2 2,4-dienoyl CoA reductase 2, peroxisomal
DHRS7 dehydrogenase/reductase (SDR family) member 7
DKFZP434L187 uncharacterized LOC26082
DLEU2L deleted in lymphocytic leukemia 2-like
DNASE1L1 deoxyribonuclease I-like 1
DPP6 dipeptidyl-peptidase 6
DTYMK deoxythymidylate kinase (thymidylate kinase)
DUSP19 dual specificity phosphatase 19
DUSP9 dual specificity phosphatase 9
DYDC2 DPY30 domain containing 2
ECD ecdysoneless homolog (Drosophila)
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
EIF4A1 eukaryotic translation initiation factor 4A1
ENPP4 ectonucleotide pyrophosphatase/phosphodiesterase 4 (putative)
ENTHD1 ENTH domain containing 1
EPDR1 ependymin related 1
EPHA8 EPH receptor A8
EPOR erythropoietin receptor
EXOSC1 exosome component 1
EXTL2 exostosin-like glycosyltransferase 2
FAM177A1 family with sequence similarity 177, member A1
FAM19A3 family with sequence similarity 19 (chemokine (C-C motif)-like), member A3
FAM58BP cyclin-related protein FAM58B
FAM64A family with sequence similarity 64, member A
FAM69A family with sequence similarity 69, member A
FAM81A family with sequence similarity 81, member A
FBXO2 F-box protein 2
FBXO47 F-box protein 47
FCRLB Fc receptor-like B
FDXR ferredoxin reductase
FKBP3 FK506 binding protein 3, 25kDa
FLJ44635 TPT1-like protein
FPGT fucose-1-phosphate guanylyltransferase
FRMD6 FERM domain containing 6
FXYD7 FXYD domain containing ion transport regulator 7
GABRA5 gamma-aminobutyric acid (GABA) A receptor, alpha 5
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3
GADL1 glutamate decarboxylase-like 1
GDAP1 ganglioside induced differentiation associated protein 1
GEMIN6 gem (nuclear organelle) associated protein 6
GIPC1 GIPC PDZ domain containing family, member 1
GOLGA3 golgin A3
GOLGA7B golgin A7 family, member B
GPC6 glypican 6
GPR19 G protein-coupled receptor 19
GPR84 G protein-coupled receptor 84
GRAMD1C GRAM domain containing 1C
GRIN3B glutamate receptor, ionotropic, N-methyl-D-aspartate 3B
GRTP1 growth hormone regulated TBC protein 1
GSTO1 glutathione S-transferase omega 1
H2AFZ H2A histone family, member Z
HAR1A highly accelerated region 1A (non-protein coding)
HCG22 HLA complex group 22
HES2 hes family bHLH transcription factor 2
HMBS hydroxymethylbilane synthase
HMG20B high mobility group 20B
HS1BP3 HCLS1 binding protein 3
HSD3B7 hydroxy-delta-5-steroid dehydrogenase, 3 beta- and steroid delta-isomerase 7
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
IFT81 intraflagellar transport 81
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
INSIG2 insulin induced gene 2
IRX3 iroquois homeobox 3
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCTD10 potassium channel tetramerization domain containing 10
KCTD5 potassium channel tetramerization domain containing 5
KIAA1549L KIAA1549-like
KIF1BP KIF1 binding protein
KIF4B kinesin family member 4B
KIF5C kinesin family member 5C
KIN Kin17 DNA and RNA binding protein
KITLG KIT ligand
KLLN killin, p53-regulated DNA replication inhibitor
KPNA1 karyopherin alpha 1 (importin alpha 5)
L1CAM L1 cell adhesion molecule
LCLAT1 lysocardiolipin acyltransferase 1
LEF1 lymphoid enhancer-binding factor 1
LGALS1 lectin, galactoside-binding, soluble, 1
LHPP phospholysine phosphohistidine inorganic pyrophosphate phosphatase
LINC00520 long intergenic non-protein coding RNA 520
LOC284632 uncharacterized LOC284632
LOC344967 acyl-CoA thioesterase 7 pseudogene
LOC374443 C-type lectin domain family 2, member D pseudogene
LRRC29 leucine rich repeat containing 29
MAD2L1BP MAD2L1 binding protein
MANBA mannosidase, beta A, lysosomal
MAPK11 mitogen-activated protein kinase 11
MAST1 microtubule associated serine/threonine kinase 1
MAST2 microtubule associated serine/threonine kinase 2
MBP myelin basic protein
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCAM melanoma cell adhesion molecule
MDH1 malate dehydrogenase 1, NAD (soluble)
MDM2 MDM2 proto-oncogene, E3 ubiquitin protein ligase
MEIG1 meiosis/spermiogenesis associated 1
MFSD12 major facilitator superfamily domain containing 12
MFSD4 major facilitator superfamily domain containing 4
MICU1 mitochondrial calcium uptake 1
MILR1 mast cell immunoglobulin-like receptor 1
MINPP1 multiple inositol-polyphosphate phosphatase 1
MME membrane metallo-endopeptidase
MMP14 matrix metallopeptidase 14 (membrane-inserted)
MMP8 matrix metallopeptidase 8
MPG N-methylpurine-DNA glycosylase
MRPL17 mitochondrial ribosomal protein L17
MRPL19 mitochondrial ribosomal protein L19
MRPL39 mitochondrial ribosomal protein L39
MRPS16 mitochondrial ribosomal protein S16
MTERF2 mitochondrial transcription termination factor 2
MTFMT mitochondrial methionyl-tRNA formyltransferase
MTHFS 5,10-methenyltetrahydrofolate synthetase (5-formyltetrahydrofolate cyclo-ligase)
MVK mevalonate kinase
NABP1 nucleic acid binding protein 1
NCALD neurocalcin delta
NCK2 NCK adaptor protein 2
NINJ1 ninjurin 1
NLGN4Y neuroligin 4, Y-linked
NME2P1 NME/NM23 nucleoside diphosphate kinase 2 pseudogene 1
NOTCH2NL notch 2 N-terminal like
NUP107 nucleoporin 107kDa
NUP93 nucleoporin 93kDa
OAZ3 ornithine decarboxylase antizyme 3
OR10J1 olfactory receptor, family 10, subfamily J, member 1
OR13F1 olfactory receptor, family 13, subfamily F, member 1
OR14C36 olfactory receptor, family 14, subfamily C, member 36
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR5B21 olfactory receptor, family 5, subfamily B, member 21
PA2G4P4 proliferation-associated 2G4 pseudogene 4
PARD6G par-6 family cell polarity regulator gamma
PDE6D phosphodiesterase 6D, cGMP-specific, rod, delta
PDZD7 PDZ domain containing 7
PEBP1 phosphatidylethanolamine binding protein 1
PECR peroxisomal trans-2-enoyl-CoA reductase
PFN4 profilin family, member 4
PGAM1 phosphoglycerate mutase 1 (brain)
PGAM4 phosphoglycerate mutase family member 4
PHYH phytanoyl-CoA 2-hydroxylase
PLK3 polo-like kinase 3
PNLIPRP3 pancreatic lipase-related protein 3
POLE4 polymerase (DNA-directed), epsilon 4, accessory subunit
POMGNT1 protein O-linked mannose N-acetylglucosaminyltransferase 1 (beta 1,2-)
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PPAPDC1A phosphatidic acid phosphatase type 2 domain containing 1A
PPCDC phosphopantothenoylcysteine decarboxylase
PPP1R1A protein phosphatase 1, regulatory (inhibitor) subunit 1A
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha
PQLC2L PQ loop repeat containing 2-like
PRDM15 PR domain containing 15
PRDM7 PR domain containing 7
PRKCB protein kinase C, beta
PRKRA protein kinase, interferon-inducible double stranded RNA dependent activator
PRSS12 protease, serine, 12 (neurotrypsin, motopsin)
PRSS55 protease, serine, 55
PTCHD4 patched domain containing 4
PTTG2 pituitary tumor-transforming 2
PXN paxillin
RAB2B RAB2B, member RAS oncogene family
RAN RAN, member RAS oncogene family
RBX1 ring-box 1, E3 ubiquitin protein ligase
RGS10 regulator of G-protein signaling 10
RGS11 regulator of G-protein signaling 11
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RHBDF2 rhomboid 5 homolog 2 (Drosophila)
RHNO1 RAD9-HUS1-RAD1 interacting nuclear orphan 1
RHOQ ras homolog family member Q
RITA1 RBPJ interacting and tubulin associated 1
RMI2 RecQ mediated genome instability 2
RNASE13 ribonuclease, RNase A family, 13 (non-active)
RNASE4 ribonuclease, RNase A family, 4
RNF126P1 ring finger protein 126 pseudogene 1
RNF182 ring finger protein 182
RNFT2 ring finger protein, transmembrane 2
RPL19P12 ribosomal protein L19 pseudogene 12
RPL23AP82 ribosomal protein L23a pseudogene 82
RPP25 ribonuclease P/MRP 25kDa subunit
RPP38 ribonuclease P/MRP 38kDa subunit
RSPO4 R-spondin 4
RTN4RL2 reticulon 4 receptor-like 2
RUFY3 RUN and FYVE domain containing 3
S100B S100 calcium binding protein B
SCARNA15 small Cajal body-specific RNA 15
SCML4 sex comb on midleg-like 4 (Drosophila)
SCUBE2 signal peptide, CUB domain, EGF-like 2
SEMA4C sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C
SFXN3 sideroflexin 3
SGSM2 small G protein signaling modulator 2
SGSM3 small G protein signaling modulator 3
SH3BGRL3 SH3 domain binding glutamate-rich protein like 3
SHCBP1 SHC SH2-domain binding protein 1
SLAMF9 SLAM family member 9
SLC35E3 solute carrier family 35, member E3
SLC39A6 solute carrier family 39 (zinc transporter), member 6
SLC52A3 solute carrier family 52 (riboflavin transporter), member 3
SNORA12 small nucleolar RNA, H/ACA box 12
SNORA5C small nucleolar RNA, H/ACA box 5C
SOGA3 SOGA family member 3
SPAG1 sperm associated antigen 1
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SRD5A2 steroid-5-alpha-reductase, alpha polypeptide 2 (3-oxo-5 alpha-steroid delta 4-dehydrogenase alpha 2)
SRR serine racemase
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
STBD1 starch binding domain 1
STX2 syntaxin 2
SYCE3 synaptonemal complex central element protein 3
TAF7L TAF7-like RNA polymerase II, TATA box binding protein (TBP)-associated factor, 50kDa
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TBPL2 TATA box binding protein like 2
TCEAL4 transcription elongation factor A (SII)-like 4
TDRD3 tudor domain containing 3
TENM4 teneurin transmembrane protein 4
TEX30 testis expressed 30
THNSL1 threonine synthase-like 1 (S. cerevisiae)
TIPIN TIMELESS interacting protein
TMEM138 transmembrane protein 138
TMEM14A transmembrane protein 14A
TMEM164 transmembrane protein 164
TMEM169 transmembrane protein 169
TMEM180 transmembrane protein 180
TMEM200B transmembrane protein 200B
TMEM253 transmembrane protein 253
TMEM99 transmembrane protein 99
TNFSF12 tumor necrosis factor (ligand) superfamily, member 12
TP53I3 tumor protein p53 inducible protein 3
TP53TG3B TP53 target 3B
TPSG1 tryptase gamma 1
TRAPPC4 trafficking protein particle complex 4
TRPC1 transient receptor potential cation channel, subfamily C, member 1
TSPAN1 tetraspanin 1
TSSC1 tumor suppressing subtransferable candidate 1
TUBB3 tubulin, beta 3 class III
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UBE3B ubiquitin protein ligase E3B
UCN2 urocortin 2
UMODL1 uromodulin-like 1
UXS1 UDP-glucuronate decarboxylase 1
VAC14 Vac14 homolog (S. cerevisiae)
VAX1 ventral anterior homeobox 1
VDR vitamin D (1,25- dihydroxyvitamin D3) receptor
VIM vimentin
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae)
WDR17 WD repeat domain 17
YEATS4 YEATS domain containing 4
ZBTB8A zinc finger and BTB domain containing 8A
ZDHHC16 zinc finger, DHHC-type containing 16
ZFP57 ZFP57 zinc finger protein
ZNF114 zinc finger protein 114
ZNF18 zinc finger protein 18
ZNF295-AS1 ZNF295 antisense RNA 1
ZNF365 zinc finger protein 365
ZNF441 zinc finger protein 441
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF689 zinc finger protein 689
ZNF77 zinc finger protein 77

low expression

Symbol Name
QRICH1 glutamine-rich 1
RBM5 RNA binding motif protein 5
RHOA ras homolog family member A
USP4 ubiquitin specific peptidase 4 (proto-oncogene)
WDR82 WD repeat domain 82