Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51T-06A-11R-A266-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

297 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A51T-06A-11R-A266-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD13 abhydrolase domain containing 13
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADIPOR2 adiponectin receptor 2
AGBL2 ATP/GTP binding protein-like 2
AGGF1 angiogenic factor with G patch and FHA domains 1
ALG11 ALG11, alpha-1,2-mannosyltransferase
ALG1L2 ALG1, chitobiosyldiphosphodolichol beta-mannosyltransferase-like 2
ALG5 ALG5, dolichyl-phosphate beta-glucosyltransferase
ALPI alkaline phosphatase, intestinal
AMBRA1 autophagy/beclin-1 regulator 1
ANGPTL3 angiopoietin-like 3
ANKFN1 ankyrin-repeat and fibronectin type III domain containing 1
ANKRD10 ankyrin repeat domain 10
ANKRD40 ankyrin repeat domain 40
ANKRD54 ankyrin repeat domain 54
ANXA3 annexin A3
AP1AR adaptor-related protein complex 1 associated regulatory protein
AP4S1 adaptor-related protein complex 4, sigma 1 subunit
ARGLU1 arginine and glutamate rich 1
ARHGEF28 Rho guanine nucleotide exchange factor (GEF) 28
ARHGEF38 Rho guanine nucleotide exchange factor (GEF) 38
ASB16-AS1 ASB16 antisense RNA 1
ATF4 activating transcription factor 4
ATF6B activating transcription factor 6 beta
ATOH1 atonal homolog 1 (Drosophila)
ATP7B ATPase, Cu++ transporting, beta polypeptide
B3GALTL beta 1,3-galactosyltransferase-like
BBS12 Bardet-Biedl syndrome 12
BDNF-AS BDNF antisense RNA
BST1 bone marrow stromal cell antigen 1
BTN2A1 butyrophilin, subfamily 2, member A1
C16ORF86 chromosome 16 open reading frame 86
C17ORF75 chromosome 17 open reading frame 75
C18ORF25 chromosome 18 open reading frame 25
C22ORF46 chromosome 22 open reading frame 46
C2ORF83 chromosome 2 open reading frame 83
C6ORF62 chromosome 6 open reading frame 62
CA5A carbonic anhydrase VA, mitochondrial
CARKD carbohydrate kinase domain containing
CBR4 carbonyl reductase 4
CBY1 chibby homolog 1 (Drosophila)
CCDC122 coiled-coil domain containing 122
CCKBR cholecystokinin B receptor
CCND3 cyclin D3
CCNG2 cyclin G2
CDADC1 cytidine and dCMP deaminase domain containing 1
CDC14A cell division cycle 14A
CDON cell adhesion associated, oncogene regulated
CGGBP1 CGG triplet repeat binding protein 1
CHURC1 churchill domain containing 1
CLN5 ceroid-lipofuscinosis, neuronal 5
CNGA4 cyclic nucleotide gated channel alpha 4
COG3 component of oligomeric golgi complex 3
COG6 component of oligomeric golgi complex 6
COL6A4P2 collagen, type VI, alpha 4 pseudogene 2
COMMD6 COMM domain containing 6
CPEB4 cytoplasmic polyadenylation element binding protein 4
CPPED1 calcineurin-like phosphoesterase domain containing 1
CSNK1G2-AS1 CSNK1G2 antisense RNA 1
CWC25 CWC25 spliceosome-associated protein homolog (S. cerevisiae)
DDB1 damage-specific DNA binding protein 1, 127kDa
DDX17 DEAD (Asp-Glu-Ala-Asp) box helicase 17
DGCR11 DiGeorge syndrome critical region gene 11 (non-protein coding)
DIS3 DIS3 exosome endoribonuclease and 3'-5' exoribonuclease
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DPH6 diphthamine biosynthesis 6
DPYSL2 dihydropyrimidinase-like 2
DTWD1 DTW domain containing 1
EDDM3A epididymal protein 3A
EFHC1 EF-hand domain (C-terminal) containing 1
ELF1 E74-like factor 1 (ets domain transcription factor)
ERCC5 excision repair cross-complementation group 5
ESD esterase D
EXOSC8 exosome component 8
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
FAM200B family with sequence similarity 200, member B
FAM76B family with sequence similarity 76, member B
FBXL3 F-box and leucine-rich repeat protein 3
FBXL8 F-box and leucine-rich repeat protein 8
FBXO9 F-box protein 9
FEM1B fem-1 homolog b (C. elegans)
FKBP1B FK506 binding protein 1B, 12.6 kDa
FLJ44635 TPT1-like protein
FRG2C FSHD region gene 2 family, member C
FUBP1 far upstream element (FUSE) binding protein 1
GABRP gamma-aminobutyric acid (GABA) A receptor, pi
GAGE12D G antigen 12D
GAGE8 G antigen 8
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GORASP1 golgi reassembly stacking protein 1, 65kDa
GPALPP1 GPALPP motifs containing 1
GPR119 G protein-coupled receptor 119
GPR148 G protein-coupled receptor 148
GTF2F2 general transcription factor IIF, polypeptide 2, 30kDa
HINFP histone H4 transcription factor
HIST1H4E histone cluster 1, H4e
HIST1H4L histone cluster 1, H4l
HOXB4 homeobox B4
HOXB7 homeobox B7
IFT88 intraflagellar transport 88
IGFBP7 insulin-like growth factor binding protein 7
ING1 inhibitor of growth family, member 1
INSM2 insulinoma-associated 2
INTS6 integrator complex subunit 6
IRS2 insulin receptor substrate 2
IRX6 iroquois homeobox 6
JRKL JRK-like
JUN jun proto-oncogene
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KIAA0355 KIAA0355
KIAA1407 KIAA1407
KIF6 kinesin family member 6
KIR3DP1 killer cell immunoglobulin-like receptor, three domains, pseudogene 1
KLHL10 kelch-like family member 10
KLHL9 kelch-like family member 9
KRT20 keratin 20, type I
LAMP2 lysosomal-associated membrane protein 2
LEMD2 LEM domain containing 2
LENG8 leukocyte receptor cluster (LRC) member 8
LGALS4 lectin, galactoside-binding, soluble, 4
LIG4 ligase IV, DNA, ATP-dependent
LINC00051 long intergenic non-protein coding RNA 51
LINC00115 long intergenic non-protein coding RNA 115
LINC00488 long intergenic non-protein coding RNA 488
LNX2 ligand of numb-protein X 2
LOC100130987 uncharacterized LOC100130987
LOC100131691
LOC340357 uncharacterized LOC340357
LOC440040 glutamate receptor, metabotropic 5 pseudogene
LOC441601 septin 7 pseudogene
LOC644669 ankyrin repeat domain 30B pseudogene
LPCAT2 lysophosphatidylcholine acyltransferase 2
LRRC1 leucine rich repeat containing 1
LYSMD3 LysM, putative peptidoglycan-binding, domain containing 3
LZTFL1 leucine zipper transcription factor-like 1
MBNL2 muscleblind-like splicing regulator 2
MCC mutated in colorectal cancers
MCOLN3 mucolipin 3
MED4 mediator complex subunit 4
METTL3 methyltransferase like 3
MEX3C mex-3 RNA binding family member C
MICU2 mitochondrial calcium uptake 2
MLEC malectin
MRM1 mitochondrial rRNA methyltransferase 1 homolog (S. cerevisiae)
MTHFSD methenyltetrahydrofolate synthetase domain containing
MTIF3 mitochondrial translational initiation factor 3
MTRF1 mitochondrial translational release factor 1
MYCBP MYC binding protein
MZT1 mitotic spindle organizing protein 1
N4BP2L2 NEDD4 binding protein 2-like 2
N4BP2L2-IT2 N4BPL2 intronic transcript 2
NDFIP2 Nedd4 family interacting protein 2
NKIRAS2 NFKB inhibitor interacting Ras-like 2
NLGN1 neuroligin 1
NOL12 nucleolar protein 12
NOX1 NADPH oxidase 1
NPPB natriuretic peptide B
NSA2 NSA2 ribosome biogenesis homolog (S. cerevisiae)
NUDT15 nudix (nucleoside diphosphate linked moiety X)-type motif 15
NUFIP1 nuclear fragile X mental retardation protein interacting protein 1
NXF1 nuclear RNA export factor 1
OARD1 O-acyl-ADP-ribose deacylase 1
OLFM4 olfactomedin 4
OR1E2 olfactory receptor, family 1, subfamily E, member 2
OR2L1P olfactory receptor, family 2, subfamily L, member 1 pseudogene
OR51A7 olfactory receptor, family 51, subfamily A, member 7
OR51I1 olfactory receptor, family 51, subfamily I, member 1
OR5M11 olfactory receptor, family 5, subfamily M, member 11
OR5W2 olfactory receptor, family 5, subfamily W, member 2
OR6K6 olfactory receptor, family 6, subfamily K, member 6
OR7A5 olfactory receptor, family 7, subfamily A, member 5
OR7C1 olfactory receptor, family 7, subfamily C, member 1
OR8G5 olfactory receptor, family 8, subfamily G, member 5
PAN3 PAN3 poly(A) specific ribonuclease subunit
PAWR PRKC, apoptosis, WT1, regulator
PCDHGA8 protocadherin gamma subfamily A, 8
PCID2 PCI domain containing 2
PCNXL4 pecanex-like 4 (Drosophila)
PHGR1 proline/histidine/glycine-rich 1
PHLDA1 pleckstrin homology-like domain, family A, member 1
PICK1 protein interacting with PRKCA 1
PIGY phosphatidylinositol glycan anchor biosynthesis, class Y
PKD1L2 polycystic kidney disease 1-like 2 (gene/pseudogene)
PLA2G6 phospholipase A2, group VI (cytosolic, calcium-independent)
POLR1D polymerase (RNA) I polypeptide D, 16kDa
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PPP1R14D protein phosphatase 1, regulatory (inhibitor) subunit 14D
PROSER1 proline and serine rich 1
PSG11 pregnancy specific beta-1-glycoprotein 11
PSG3 pregnancy specific beta-1-glycoprotein 3
PSG5 pregnancy specific beta-1-glycoprotein 5
PSG6 pregnancy specific beta-1-glycoprotein 6
PSG7 pregnancy specific beta-1-glycoprotein 7 (gene/pseudogene)
PSG8 pregnancy specific beta-1-glycoprotein 8
RAP2A RAP2A, member of RAS oncogene family
RAPGEF3 Rap guanine nucleotide exchange factor (GEF) 3
RASSF3 Ras association (RalGDS/AF-6) domain family member 3
RASSF7 Ras association (RalGDS/AF-6) domain family (N-terminal) member 7
RB1 retinoblastoma 1
RCBTB1 regulator of chromosome condensation (RCC1) and BTB (POZ) domain containing protein 1
RIC8B RIC8 guanine nucleotide exchange factor B
RNF219 ring finger protein 219
RNF6 ring finger protein (C3H2C3 type) 6
RPE65 retinal pigment epithelium-specific protein 65kDa
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RUNDC1 RUN domain containing 1
RWDD3 RWD domain containing 3
RXRB retinoid X receptor, beta
RYK receptor-like tyrosine kinase
SAP18 Sin3A-associated protein, 18kDa
SAP30L SAP30-like
SAXO1 stabilizer of axonemal microtubules 1
SCARNA15 small Cajal body-specific RNA 15
SERTAD4-AS1 SERTAD4 antisense RNA 1
SETDB2 SET domain, bifurcated 2
SHC4 SHC (Src homology 2 domain containing) family, member 4
SLC16A5 solute carrier family 16 (monocarboxylate transporter), member 5
SLC25A30 solute carrier family 25, member 30
SLC28A2 solute carrier family 28 (concentrative nucleoside transporter), member 2
SLC2A13 solute carrier family 2 (facilitated glucose transporter), member 13
SLC38A2 solute carrier family 38, member 2
SLC7A5P1 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 1
SLFN12 schlafen family member 12
SMARCE1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1
SMN1 survival of motor neuron 1, telomeric
SNORA31 small nucleolar RNA, H/ACA box 31
SNORA34 small nucleolar RNA, H/ACA box 34
SNORA62 small nucleolar RNA, H/ACA box 62
SNORA65 small nucleolar RNA, H/ACA box 65
SNRK SNF related kinase
SP2 Sp2 transcription factor
SPAG8 sperm associated antigen 8
SPATA22 spermatogenesis associated 22
SPDYE4 speedy/RINGO cell cycle regulator family member E4
SPERT spermatid associated
SPRY2 sprouty homolog 2 (Drosophila)
SSX1 synovial sarcoma, X breakpoint 1
STOML3 stomatin (EPB72)-like 3
SUDS3 suppressor of defective silencing 3 homolog (S. cerevisiae)
SUMO4 small ubiquitin-like modifier 4
SUPT20H suppressor of Ty 20 homolog (S. cerevisiae)
SUZ12 SUZ12 polycomb repressive complex 2 subunit
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TAF8 TAF8 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 43kDa
TAS2R3 taste receptor, type 2, member 3
TAS2R4 taste receptor, type 2, member 4
TASP1 taspase, threonine aspartase, 1
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TFAP2A transcription factor AP-2 alpha (activating enhancer binding protein 2 alpha)
TGIF2LX TGFB-induced factor homeobox 2-like, X-linked
TM9SF2 transmembrane 9 superfamily member 2
TMCO3 transmembrane and coiled-coil domains 3
TMEM14A transmembrane protein 14A
TMUB2 transmembrane and ubiquitin-like domain containing 2
TRAPPC2P1
TRHR thyrotropin-releasing hormone receptor
TRIM13 tripartite motif containing 13
TRIM2 tripartite motif containing 2
TRIM39 tripartite motif containing 39
TRIM48 tripartite motif containing 48
TRIOBP TRIO and F-actin binding protein
TSNAX-DISC1 TSNAX-DISC1 readthrough (NMD candidate)
TSSK6 testis-specific serine kinase 6
TTC14 tetratricopeptide repeat domain 14
TTC17 tetratricopeptide repeat domain 17
TTC8 tetratricopeptide repeat domain 8
TTLL8 tubulin tyrosine ligase-like family member 8
TUBGCP3 tubulin, gamma complex associated protein 3
TYR tyrosinase
UBAC2 UBA domain containing 2
UBL3 ubiquitin-like 3
UNC5CL unc-5 homolog C (C. elegans)-like
UPF3A UPF3 regulator of nonsense transcripts homolog A (yeast)
UTP14C UTP14, U3 small nucleolar ribonucleoprotein, homolog C (yeast)
UTP18 UTP18 small subunit (SSU) processome component homolog (yeast)
VIL1 villin 1
VPS36 vacuolar protein sorting 36 homolog (S. cerevisiae)
WBP4 WW domain binding protein 4
WDR63 WD repeat domain 63
WWC2-AS2 WWC2 antisense RNA 2
XIST X inactive specific transcript (non-protein coding)
ZDHHC2 zinc finger, DHHC-type containing 2
ZFAT-AS1 ZFAT antisense RNA 1
ZNF207 zinc finger protein 207
ZNF322P1 zinc finger protein 322 pseudogene 1
ZNF345 zinc finger protein 345
ZNF418 zinc finger protein 418
ZNF542P zinc finger protein 542, pseudogene
ZNF610 zinc finger protein 610
ZNF701 zinc finger protein 701
ZNF716 zinc finger protein 716
ZNF76 zinc finger protein 76
ZNF830 zinc finger protein 830

low expression

Symbol Name
SLC25A12 solute carrier family 25 (aspartate/glutamate carrier), member 12
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1