Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MU-06A-11R-A21D-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
Similar Terms
Downloads & Tools

Genes

339 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3MU-06A-11R-A21D-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AARS alanyl-tRNA synthetase
ABCA3 ATP-binding cassette, sub-family A (ABC1), member 3
ABCB4 ATP-binding cassette, sub-family B (MDR/TAP), member 4
ABCF2 ATP-binding cassette, sub-family F (GCN20), member 2
ABHD11-AS1 ABHD11 antisense RNA 1 (tail to tail)
ABLIM3 actin binding LIM protein family, member 3
ACHE acetylcholinesterase (Yt blood group)
ACTL7A actin-like 7A
ADCY1 adenylate cyclase 1 (brain)
ADCY9 adenylate cyclase 9
ADGRB2 adhesion G protein-coupled receptor B2
AEBP1 AE binding protein 1
AGFG2 ArfGAP with FG repeats 2
AGPAT1 1-acylglycerol-3-phosphate O-acyltransferase 1
AKR1C8P aldo-keto reductase family 1, member C8, pseudogene
ALPK1 alpha-kinase 1
AMACR alpha-methylacyl-CoA racemase
AMIGO1 adhesion molecule with Ig-like domain 1
AMOTL2 angiomotin like 2
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough
ANTXR1 anthrax toxin receptor 1
ANXA5 annexin A5
AP3B1 adaptor-related protein complex 3, beta 1 subunit
AP3S2 adaptor-related protein complex 3, sigma 2 subunit
APOBEC3C apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
ARHGEF37 Rho guanine nucleotide exchange factor (GEF) 37
ARPC1A actin related protein 2/3 complex, subunit 1A, 41kDa
ARPIN actin-related protein 2/3 complex inhibitor
ASNS asparagine synthetase (glutamine-hydrolyzing)
ATF4 activating transcription factor 4
ATG10 autophagy related 10
ATP1A1 ATPase, Na+/K+ transporting, alpha 1 polypeptide
ATP6AP1L ATPase, H+ transporting, lysosomal accessory protein 1-like
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATP8B2 ATPase, aminophospholipid transporter, class I, type 8B, member 2
ATP9B ATPase, class II, type 9B
BARHL2 BarH-like homeobox 2
BCL7B B-cell CLL/lymphoma 7B
BCYRN1 brain cytoplasmic RNA 1
BET1 Bet1 golgi vesicular membrane trafficking protein
BIN3 bridging integrator 3
BMF Bcl2 modifying factor
BMP8A bone morphogenetic protein 8a
BRF2 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
BTBD9 BTB (POZ) domain containing 9
C17ORF107 chromosome 17 open reading frame 107
C21ORF62-AS1 C21orf62 antisense RNA 1
C4ORF17 chromosome 4 open reading frame 17
C7ORF31 chromosome 7 open reading frame 31
C7ORF49 chromosome 7 open reading frame 49
CACNA1D calcium channel, voltage-dependent, L type, alpha 1D subunit
CAMK4 calcium/calmodulin-dependent protein kinase IV
CARD6 caspase recruitment domain family, member 6
CBS cystathionine-beta-synthase
CBX4 chromobox homolog 4
CBX7 chromobox homolog 7
CCNO cyclin O
CDKN2AIPNL CDKN2A interacting protein N-terminal like
CELSR2 cadherin, EGF LAG seven-pass G-type receptor 2
CGN cingulin
CHD3 chromodomain helicase DNA binding protein 3
CHD6 chromodomain helicase DNA binding protein 6
CHRD chordin
CILP cartilage intermediate layer protein, nucleotide pyrophosphohydrolase
CLGN calmegin
CNOT4 CCR4-NOT transcription complex, subunit 4
COL18A1 collagen, type XVIII, alpha 1
COL18A1-AS1 COL18A1 antisense RNA 1
COPS6 COP9 signalosome subunit 6
COX7C cytochrome c oxidase subunit VIIc
CRYAB crystallin, alpha B
CTNNA1 catenin (cadherin-associated protein), alpha 1, 102kDa
CTNNB1 catenin (cadherin-associated protein), beta 1, 88kDa
CTSA cathepsin A
DACT1 dishevelled-binding antagonist of beta-catenin 1
DBNL drebrin-like
DDR1 discoidin domain receptor tyrosine kinase 1
DDX24 DEAD (Asp-Glu-Ala-Asp) box helicase 24
DDX56 DEAD (Asp-Glu-Ala-Asp) box helicase 56
DET1 de-etiolated homolog 1 (Arabidopsis)
DFNB31 deafness, autosomal recessive 31
DLGAP4 discs, large (Drosophila) homolog-associated protein 4
DNAJC18 DnaJ (Hsp40) homolog, subfamily C, member 18
DNAJC25-GNG10 DNAJC25-GNG10 readthrough
DPYSL2 dihydropyrimidinase-like 2
DTX2P1-UPK3BP1-PMS2P11 DTX2P1-UPK3BP1-PMS2P11 readthrough transcribed pseudogene
DUSP4 dual specificity phosphatase 4
DUSP8 dual specificity phosphatase 8
DYNC1H1 dynein, cytoplasmic 1, heavy chain 1
EPHB4 EPH receptor B4
ESYT1 extended synaptotagmin-like protein 1
EXOC4 exocyst complex component 4
EZH1 enhancer of zeste 1 polycomb repressive complex 2 subunit
F13B coagulation factor XIII, B polypeptide
F2R coagulation factor II (thrombin) receptor
FAM120C family with sequence similarity 120C
FAM149A family with sequence similarity 149, member A
FAM167B family with sequence similarity 167, member B
FAM173B family with sequence similarity 173, member B
FAM174A family with sequence similarity 174, member A
FASTK Fas-activated serine/threonine kinase
FBXL18 F-box and leucine-rich repeat protein 18
FHDC1 FH2 domain containing 1
FIS1 fission 1 (mitochondrial outer membrane) homolog (S. cerevisiae)
FITM2 fat storage-inducing transmembrane protein 2
FKBP1AP1 FK506 binding protein 1A, 12kDa pseudogene 1
FN1 fibronectin 1
FTH1P3 ferritin, heavy polypeptide 1 pseudogene 3
FXR2 fragile X mental retardation, autosomal homolog 2
GABARAPL1 GABA(A) receptor-associated protein like 1
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GARS glycyl-tRNA synthetase
GATB glutamyl-tRNA(Gln) amidotransferase, subunit B
GATSL2 GATS protein-like 2
GCC1 GRIP and coiled-coil domain containing 1
GDF15 growth differentiation factor 15
GDPGP1 GDP-D-glucose phosphorylase 1
GNG13 guanine nucleotide binding protein (G protein), gamma 13
GOLGA2 golgin A2
GOLGA2P3Y golgin A2 pseudogene 3, Y-linked
GPNMB glycoprotein (transmembrane) nmb
GSTM2P1 glutathione S-transferase mu 2 (muscle) pseudogene 1
GTF2I general transcription factor IIi
GTF2IP1 general transcription factor IIi pseudogene 1
HABP4 hyaluronan binding protein 4
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HILS1 histone linker H1 domain, spermatid-specific 1, pseudogene
HOXC10 homeobox C10
HRH2 histamine receptor H2
HSD17B4 hydroxysteroid (17-beta) dehydrogenase 4
HSPA9 heat shock 70kDa protein 9 (mortalin)
HSPB1 heat shock 27kDa protein 1
HSPB7 heat shock 27kDa protein family, member 7 (cardiovascular)
HUS1 HUS1 checkpoint homolog (S. pombe)
IK IK cytokine, down-regulator of HLA II
ILDR2 immunoglobulin-like domain containing receptor 2
INPP5J inositol polyphosphate-5-phosphatase J
INTS1 integrator complex subunit 1
JADE2 jade family PHD finger 2
KBTBD13 kelch repeat and BTB (POZ) domain containing 13
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCNK15 potassium channel, two pore domain subfamily K, member 15
KDM3B lysine (K)-specific demethylase 3B
KIF1C kinesin family member 1C
KIF6 kinesin family member 6
KIRREL kin of IRRE like (Drosophila)
KLF14 Kruppel-like factor 14
KLHDC10 kelch domain containing 10
KLHL21 kelch-like family member 21
LAMA5 laminin, alpha 5
LAMB2 laminin, beta 2 (laminin S)
LARP1 La ribonucleoprotein domain family, member 1
LHFPL2 lipoma HMGIC fusion partner-like 2
LMNA lamin A/C
LMTK2 lemur tyrosine kinase 2
LOC100130093 uncharacterized LOC100130093
LOC100272216 uncharacterized LOC100272216
LOC285740 uncharacterized LOC285740
LOC392196 ubiquitin specific peptidase 17-like family member 2 pseudogene
LOC728024 chromosome X open reading frame 56 pseudogene
LRP1 low density lipoprotein receptor-related protein 1
LRRC48 leucine rich repeat containing 48
LZTS1 leucine zipper, putative tumor suppressor 1
MAFG v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog G
MAFK v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog K
MAGEB2 melanoma antigen family B2
MALSU1 mitochondrial assembly of ribosomal large subunit 1
MAML3 mastermind-like 3 (Drosophila)
MAN2A2 mannosidase, alpha, class 2A, member 2
MANBAL mannosidase, beta A, lysosomal-like
MBP myelin basic protein
MCC mutated in colorectal cancers
MCCC2 methylcrotonoyl-CoA carboxylase 2 (beta)
MCTS2P malignant T cell amplified sequence 2, pseudogene
MFGE8 milk fat globule-EGF factor 8 protein
MFI2 antigen p97 (melanoma associated) identified by monoclonal antibodies 133.2 and 96.5
MGAT4B mannosyl (alpha-1,3-)-glycoprotein beta-1,4-N-acetylglucosaminyltransferase, isozyme B
MPRIP myosin phosphatase Rho interacting protein
MRPS27 mitochondrial ribosomal protein S27
MTMR11 myotubularin related protein 11
MUM1 melanoma associated antigen (mutated) 1
MYH9 myosin, heavy chain 9, non-muscle
MYO1C myosin IC
NACC2 NACC family member 2, BEN and BTB (POZ) domain containing
NEIL2 nei endonuclease VIII-like 2 (E. coli)
NES nestin
NFIC nuclear factor I/C (CCAAT-binding transcription factor)
NKX2-3 NK2 homeobox 3
NKX6-1 NK6 homeobox 1
NLRP13 NLR family, pyrin domain containing 13
NPY6R neuropeptide Y receptor Y6 (pseudogene)
NQO1 NAD(P)H dehydrogenase, quinone 1
NR3C2 nuclear receptor subfamily 3, group C, member 2
NTN3 netrin 3
NTN4 netrin 4
NUDCD3 NudC domain containing 3
NUPR1 nuclear protein, transcriptional regulator, 1
OGDH oxoglutarate (alpha-ketoglutarate) dehydrogenase (lipoamide)
OLMALINC oligodendrocyte maturation-associated long intergenic non-coding RNA
OR10G3 olfactory receptor, family 10, subfamily G, member 3
OR10K1 olfactory receptor, family 10, subfamily K, member 1
OR1G1 olfactory receptor, family 1, subfamily G, member 1
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR6W1P olfactory receptor, family 6, subfamily W, member 1 pseudogene
P2RX6 purinergic receptor P2X, ligand gated ion channel, 6
PANX2 pannexin 2
PATE3 prostate and testis expressed 3
PBOV1 prostate and breast cancer overexpressed 1
PBXIP1 pre-B-cell leukemia homeobox interacting protein 1
PCDH1 protocadherin 1
PCDHA3 protocadherin alpha 3
PCDHB10 protocadherin beta 10
PCDHB11 protocadherin beta 11
PCDHB16 protocadherin beta 16
PCDHB17P protocadherin beta 17 pseudogene
PCDHB2 protocadherin beta 2
PCDHB3 protocadherin beta 3
PCDHB5 protocadherin beta 5
PCDHB6 protocadherin beta 6
PCDHB7 protocadherin beta 7
PCDHB8 protocadherin beta 8
PCDHB9 protocadherin beta 9
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGA2 protocadherin gamma subfamily A, 2
PCDHGA5 protocadherin gamma subfamily A, 5
PDCD6 programmed cell death 6
PDGFB platelet-derived growth factor beta polypeptide
PDLIM2 PDZ and LIM domain 2 (mystique)
PELO pelota homolog (Drosophila)
PEX6 peroxisomal biogenesis factor 6
PHLDA3 pleckstrin homology-like domain, family A, member 3
PICK1 protein interacting with PRKCA 1
PLOD3 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 3
PLXNA1 plexin A1
PLXNB2 plexin B2
PNMA2 paraneoplastic Ma antigen 2
POLM polymerase (DNA directed), mu
POM121C POM121 transmembrane nucleoporin C
POMZP3 POM121 and ZP3 fusion
POU5F2 POU domain class 5, transcription factor 2
PPIAL4D peptidylprolyl isomerase A (cyclophilin A)-like 4D
PPP2R5B protein phosphatase 2, regulatory subunit B', beta
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRPF8 pre-mRNA processing factor 8
PRR16 proline rich 16
PSD2 pleckstrin and Sec7 domain containing 2
PTCD1 pentatricopeptide repeat domain 1
PTPN14 protein tyrosine phosphatase, non-receptor type 14
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RHBDD2 rhomboid domain containing 2
RNF145 ring finger protein 145
RNF150 ring finger protein 150
RPS10P7 ribosomal protein S10 pseudogene 7
RPS26P11 ribosomal protein S26 pseudogene 11
RSG1 REM2 and RAB-like small GTPase 1
SAMD11 sterile alpha motif domain containing 11
SDC4P syndecan 4 pseudogene
SEC31A SEC31 homolog A (S. cerevisiae)
SESN2 sestrin 2
SHISA6 shisa family member 6
SKP1 S-phase kinase-associated protein 1
SLC12A4 solute carrier family 12 (potassium/chloride transporter), member 4
SLC22A5 solute carrier family 22 (organic cation/carnitine transporter), member 5
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC45A2 solute carrier family 45, member 2
SLC4A2 solute carrier family 4 (anion exchanger), member 2
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20
SLC7A5P2 solute carrier family 7 (amino acid transporter light chain, L system), member 5 pseudogene 2
SLCO3A1 solute carrier organic anion transporter family, member 3A1
SMCR5 Smith-Magenis syndrome chromosome region, candidate 5 (non-protein coding)
SMO smoothened, frizzled class receptor
SMURF1 SMAD specific E3 ubiquitin protein ligase 1
SND1 staphylococcal nuclease and tudor domain containing 1
SNORA47 small nucleolar RNA, H/ACA box 47
SPATA24 spermatogenesis associated 24
SPATA9 spermatogenesis associated 9
SPDYE3 speedy/RINGO cell cycle regulator family member E3
SPECC1L sperm antigen with calponin homology and coiled-coil domains 1-like
SPRYD3 SPRY domain containing 3
SPTAN1 spectrin, alpha, non-erythrocytic 1
SQSTM1 sequestosome 1
SREBF1 sterol regulatory element binding transcription factor 1
SRRM3 serine/arginine repetitive matrix 3
SSR4P1 signal sequence receptor, delta pseudogene 1
STYXL1 serine/threonine/tyrosine interacting-like 1
SYNM synemin, intermediate filament protein
SYNPR synaptoporin
TAF6 TAF6 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 80kDa
TARS threonyl-tRNA synthetase
TBC1D3P1-DHX40P1 TBC1D3P1-DHX40P1 readthrough transcribed pseudogene
TKT transketolase
TLN1 talin 1
TMEM109 transmembrane protein 109
TMEM140 transmembrane protein 140
TMEM173 transmembrane protein 173
TMEM8B transmembrane protein 8B
TMTC1 transmembrane and tetratricopeptide repeat containing 1
TNNT1 troponin T type 1 (skeletal, slow)
TNPO3 transportin 3
TP53TG1 TP53 target 1 (non-protein coding)
TRIM16L tripartite motif containing 16-like
TRIM35 tripartite motif containing 35
TRIM4 tripartite motif containing 4
TRIM56 tripartite motif containing 56
TRIOBP TRIO and F-actin binding protein
TRIP6 thyroid hormone receptor interactor 6
TRRAP transformation/transcription domain-associated protein
TSC22D4 TSC22 domain family, member 4
TSPAN33 tetraspanin 33
TSSK1B testis-specific serine kinase 1B
TTI2 TELO2 interacting protein 2
TXNRD1 thioredoxin reductase 1
UBE2D4 ubiquitin-conjugating enzyme E2D 4 (putative)
UBE3B ubiquitin protein ligase E3B
UBTFL1 upstream binding transcription factor, RNA polymerase I-like 1
UNC45A unc-45 homolog A (C. elegans)
URGCP upregulator of cell proliferation
USP19 ubiquitin specific peptidase 19
USP22 ubiquitin specific peptidase 22
VDAC1 voltage-dependent anion channel 1
VPS37D vacuolar protein sorting 37 homolog D (S. cerevisiae)
WBSCR27 Williams Beuren syndrome chromosome region 27
WDR81 WD repeat domain 81
WDR91 WD repeat domain 91
WNT4 wingless-type MMTV integration site family, member 4
WWC2-AS2 WWC2 antisense RNA 2
YKT6 YKT6 v-SNARE homolog (S. cerevisiae)
YPEL4 yippee-like 4 (Drosophila)
ZBED3 zinc finger, BED-type containing 3
ZBTB4 zinc finger and BTB domain containing 4
ZFP92 ZFP92 zinc finger protein
ZFYVE1 zinc finger, FYVE domain containing 1
ZNF362 zinc finger protein 362
ZNF815P zinc finger protein 815, pseudogene
ZSCAN21 zinc finger and SCAN domain containing 21
ZSCAN25 zinc finger and SCAN domain containing 25
ZSWIM6 zinc finger, SWIM-type containing 6

low expression

Symbol Name
NME6 NME/NM23 nucleoside diphosphate kinase 6
PSMD5 proteasome (prosome, macropain) 26S subunit, non-ATPase, 5