Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3CF-06A-11R-A18T-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

266 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A3CF-06A-11R-A18T-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAD10 acyl-CoA dehydrogenase family, member 10
ACP1 acid phosphatase 1, soluble
ACTR2 ARP2 actin-related protein 2 homolog (yeast)
ACYP1 acylphosphatase 1, erythrocyte (common) type
ADGRF3 adhesion G protein-coupled receptor F3
ADI1 acireductone dioxygenase 1
ALK anaplastic lymphoma receptor tyrosine kinase
ANAPC7 anaphase promoting complex subunit 7
ANKHD1 ankyrin repeat and KH domain containing 1
ANKHD1-EIF4EBP3 ANKHD1-EIF4EBP3 readthrough
ANKRD28 ankyrin repeat domain 28
ANKRD32 ankyrin repeat domain 32
AP3S1 adaptor-related protein complex 3, sigma 1 subunit
ARPC3 actin related protein 2/3 complex, subunit 3, 21kDa
ARSK arylsulfatase family, member K
ATG10 autophagy related 10
ATL2 atlastin GTPase 2
AURKAIP1 aurora kinase A interacting protein 1
B4GALT7 xylosylprotein beta 1,4-galactosyltransferase, polypeptide 7
BEST1 bestrophin 1
BOLA3 bolA family member 3
C12ORF43 chromosome 12 open reading frame 43
C15ORF32 chromosome 15 open reading frame 32
C15ORF52 chromosome 15 open reading frame 52
C17ORF89 chromosome 17 open reading frame 89
C2ORF74 chromosome 2 open reading frame 74
C5ORF30 chromosome 5 open reading frame 30
C5ORF51 chromosome 5 open reading frame 51
CA8 carbonic anhydrase VIII
CALHM3 calcium homeostasis modulator 3
CALM2 calmodulin 2 (phosphorylase kinase, delta)
CAMTA1 calmodulin binding transcription activator 1
CANX calnexin
CAST calpastatin
CATSPER1 cation channel, sperm associated 1
CCDC54 coiled-coil domain containing 54
CCDC79 coiled-coil domain containing 79
CCDC81 coiled-coil domain containing 81
CCR8 chemokine (C-C motif) receptor 8
CDK11B cyclin-dependent kinase 11B
CEP104 centrosomal protein 104kDa
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHCHD1 coiled-coil-helix-coiled-coil-helix domain containing 1
CHD1 chromodomain helicase DNA binding protein 1
CHSY3 chondroitin sulfate synthase 3
CLIP4 CAP-GLY domain containing linker protein family, member 4
CLK4 CDC-like kinase 4
COMMD10 COMM domain containing 10
CPN2 carboxypeptidase N, polypeptide 2
CTSH cathepsin H
CYSTM1 cysteine-rich transmembrane module containing 1
DDI2 DNA-damage inducible 1 homolog 2 (S. cerevisiae)
DDX41 DEAD (Asp-Glu-Ala-Asp) box polypeptide 41
DENND2D DENN/MADD domain containing 2D
DFFA DNA fragmentation factor, 45kDa, alpha polypeptide
DHRS3 dehydrogenase/reductase (SDR family) member 3
DHX57 DEAH (Asp-Glu-Ala-Asp/His) box polypeptide 57
DIMT1 DIM1 dimethyladenosine transferase 1 homolog (S. cerevisiae)
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DND1 DND microRNA-mediated repression inhibitor 1
DPPA3 developmental pluripotency associated 3
DUPD1 dual specificity phosphatase and pro isomerase domain containing 1
ENO3 enolase 3 (beta, muscle)
FAM134B family with sequence similarity 134, member B
FAM161A family with sequence similarity 161, member A
FAM98A family with sequence similarity 98, member A
FBXL17 F-box and leucine-rich repeat protein 17
FBXL7 F-box and leucine-rich repeat protein 7
FBXO4 F-box protein 4
FBXO42 F-box protein 42
FBXO48 F-box protein 48
FER fer (fps/fes related) tyrosine kinase
FEZ2 fasciculation and elongation protein zeta 2 (zygin II)
FKBP3 FK506 binding protein 3, 25kDa
FLT4 fms-related tyrosine kinase 4
FNDC4 fibronectin type III domain containing 4
FNDC7 fibronectin type III domain containing 7
FOSL2 FOS-like antigen 2
FOXD4L1 forkhead box D4-like 1
FOXN2 forkhead box N2
FXYD7 FXYD domain containing ion transport regulator 7
GALM galactose mutarotase (aldose 1-epimerase)
GEMIN6 gem (nuclear organelle) associated protein 6
GFM2 G elongation factor, mitochondrial 2
GHITM growth hormone inducible transmembrane protein
GIN1 gypsy retrotransposon integrase 1
GLRX glutaredoxin (thioltransferase)
GNB1 guanine nucleotide binding protein (G protein), beta polypeptide 1
GPM6A glycoprotein M6A
GPN3 GPN-loop GTPase 3
GTF2H2B general transcription factor IIH, polypeptide 2B (pseudogene)
GUSBP1 glucuronidase, beta pseudogene 1
HARS histidyl-tRNA synthetase
HARS2 histidyl-tRNA synthetase 2, mitochondrial
HBEGF heparin-binding EGF-like growth factor
HCFC2 host cell factor C2
HIST1H2BG histone cluster 1, H2bg
HRH2 histamine receptor H2
HTR3D 5-hydroxytryptamine (serotonin) receptor 3D, ionotropic
ICMT isoprenylcysteine carboxyl methyltransferase
ID2 inhibitor of DNA binding 2, dominant negative helix-loop-helix protein
IFT172 intraflagellar transport 172
IGIP IgA-inducing protein
IK IK cytokine, down-regulator of HLA II
IL4 interleukin 4
KCNH1 potassium channel, voltage gated eag related subfamily H, member 1
KCTD10 potassium channel tetramerization domain containing 10
KIAA1033 KIAA1033
KIAA2013 KIAA2013
KLHL32 kelch-like family member 32
KRTAP19-8 keratin associated protein 19-8
KRTCAP3 keratinocyte associated protein 3
LACE1 lactation elevated 1
LAYN layilin
LCLAT1 lysocardiolipin acyltransferase 1
LIMA1 LIM domain and actin binding 1
LINC00305 long intergenic non-protein coding RNA 305
LLPH LLP homolog, long-term synaptic facilitation (Aplysia)
LNPEP leucyl/cystinyl aminopeptidase
LOC641367 cyclin Y-like 1 pseudogene
LZIC leucine zipper and CTNNBIP1 domain containing
MAP4K3 mitogen-activated protein kinase kinase kinase kinase 3
MAS1L MAS1 proto-oncogene like, G protein-coupled receptor
MBL2 mannose-binding lectin (protein C) 2, soluble
MEGF9 multiple EGF-like-domains 9
MEMO1 mediator of cell motility 1
MFSD11 major facilitator superfamily domain containing 11
MLXIP MLX interacting protein
MMP8 matrix metallopeptidase 8
MOB1A MOB kinase activator 1A
MORN2 MORN repeat containing 2
MRPL20 mitochondrial ribosomal protein L20
MRPL33 mitochondrial ribosomal protein L33
MTCP1 mature T-cell proliferation 1
MTOR mechanistic target of rapamycin (serine/threonine kinase)
MYO10 myosin X
NADK NAD kinase
NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa
NDUFAF7 NADH dehydrogenase (ubiquinone) complex I, assembly factor 7
NECAP2 NECAP endocytosis associated 2
NEFL neurofilament, light polypeptide
NGF nerve growth factor (beta polypeptide)
NHLRC2 NHL repeat containing 2
NOC3L nucleolar complex associated 3 homolog (S. cerevisiae)
NOL9 nucleolar protein 9
NR2E1 nuclear receptor subfamily 2, group E, member 1
NRBP1 nuclear receptor binding protein 1
NUDT12 nudix (nucleoside diphosphate linked moiety X)-type motif 12
NUP37 nucleoporin 37kDa
OIT3 oncoprotein induced transcript 3
OR1N1 olfactory receptor, family 1, subfamily N, member 1
OR2AG2 olfactory receptor, family 2, subfamily AG, member 2
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR4F6 olfactory receptor, family 4, subfamily F, member 6
ORMDL2 ORMDL sphingolipid biosynthesis regulator 2
OTUD7A OTU deubiquitinase 7A
PADI2 peptidyl arginine deiminase, type II
PANK4 pantothenate kinase 4
PARK7 parkinson protein 7
PDLIM4 PDZ and LIM domain 4
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PEX10 peroxisomal biogenesis factor 10
PFDN1 prefoldin subunit 1
PFN4 profilin family, member 4
PIK3CD phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit delta
PIK3R3 phosphoinositide-3-kinase, regulatory subunit 3 (gamma)
PJA2 praja ring finger 2, E3 ubiquitin protein ligase
PLB1 phospholipase B1
PLEKHD1 pleckstrin homology domain containing, family D (with coiled-coil domains) member 1
PNO1 partner of NOB1 homolog (S. cerevisiae)
PNPT1 polyribonucleotide nucleotidyltransferase 1
POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae)
PPIC peptidylprolyl isomerase C (cyclophilin C)
PPIP5K2 diphosphoinositol pentakisphosphate kinase 2
PPP1CB protein phosphatase 1, catalytic subunit, beta isozyme
PRDM6 PR domain containing 6
PRRC1 proline-rich coiled-coil 1
PSMD12 proteasome (prosome, macropain) 26S subunit, non-ATPase, 12
PURA purine-rich element binding protein A
RAB1A RAB1A, member RAS oncogene family
RAB24 RAB24, member RAS oncogene family
RAB33A RAB33A, member RAS oncogene family
RAN RAN, member RAS oncogene family
RCC2 regulator of chromosome condensation 2
RER1 retention in endoplasmic reticulum sorting receptor 1
RFESD Rieske (Fe-S) domain containing
RHOBTB3 Rho-related BTB domain containing 3
RIOK2 RIO kinase 2
RNF34 ring finger protein 34, E3 ubiquitin protein ligase
RSC1A1 regulatory solute carrier protein, family 1, member 1
RSG1 REM2 and RAB-like small GTPase 1
RUFY1 RUN and FYVE domain containing 1
SCUBE3 signal peptide, CUB domain, EGF-like 3
SDHB succinate dehydrogenase complex, subunit B, iron sulfur (Ip)
SELP selectin P (granule membrane protein 140kDa, antigen CD62)
SF3B6 splicing factor 3b, subunit 6, 14kDa
SH3YL1 SH3 and SYLF domain containing 1
SIGLEC5 sialic acid binding Ig-like lectin 5
SKA2 spindle and kinetochore associated complex subunit 2
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC25A46 solute carrier family 25, member 46
SLC35A4 solute carrier family 35, member A4
SLC46A3 solute carrier family 46, member 3
SLC4A9 solute carrier family 4, sodium bicarbonate cotransporter, member 9
SLC6A4 solute carrier family 6 (neurotransmitter transporter), member 4
SMC6 structural maintenance of chromosomes 6
SMPD1 sphingomyelin phosphodiesterase 1, acid lysosomal
SNORA14B small nucleolar RNA, H/ACA box 14B
SNTG2 syntrophin, gamma 2
SNX2 sorting nexin 2
SNX24 sorting nexin 24
SOS1 son of sevenless homolog 1 (Drosophila)
SPDYA speedy/RINGO cell cycle regulator family member A
SPECC1 sperm antigen with calponin homology and coiled-coil domains 1
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRA1 steroid receptor RNA activator 1
SRBD1 S1 RNA binding domain 1
SRFBP1 serum response factor binding protein 1
SRSF7 serine/arginine-rich splicing factor 7
ST7-AS2 ST7 antisense RNA 2
STAMBP STAM binding protein
SUB1 SUB1 homolog (S. cerevisiae)
SUSD1 sushi domain containing 1
SZRD1 SUZ RNA binding domain containing 1
TAF9 TAF9 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 32kDa
TAS2R8 taste receptor, type 2, member 8
TDGF1P3 teratocarcinoma-derived growth factor 1 pseudogene 3
TIMP2 TIMP metallopeptidase inhibitor 2
TMCO6 transmembrane and coiled-coil domains 6
TMED7 transmembrane emp24 protein transport domain containing 7
TMED7-TICAM2 TMED7-TICAM2 readthrough
TMED9 transmembrane emp24 protein transport domain containing 9
TMEM106C transmembrane protein 106C
TMEM126B transmembrane protein 126B
TMEM18 transmembrane protein 18
TMEM51 transmembrane protein 51
TNFRSF14 tumor necrosis factor receptor superfamily, member 14
TNPO1 transportin 1
TP53I3 tumor protein p53 inducible protein 3
TRAPPC12 trafficking protein particle complex 12
TRIAP1 TP53 regulated inhibitor of apoptosis 1
TRIO trio Rho guanine nucleotide exchange factor
TRMT61B tRNA methyltransferase 61B
TRUB2 TruB pseudouridine (psi) synthase family member 2
TSTD1 thiosulfate sulfurtransferase (rhodanese)-like domain containing 1
TTC16 tetratricopeptide repeat domain 16
TTC23L tetratricopeptide repeat domain 23-like
TTC37 tetratricopeptide repeat domain 37
UBE2N ubiquitin-conjugating enzyme E2N
UBIAD1 UbiA prenyltransferase domain containing 1
USP50 ubiquitin specific peptidase 50
VAMP3 vesicle-associated membrane protein 3
VPS29 vacuolar protein sorting 29 homolog (S. cerevisiae)
VWA1 von Willebrand factor A domain containing 1
WDR36 WD repeat domain 36
WDR43 WD repeat domain 43
WDR55 WD repeat domain 55
WDR92 WD repeat domain 92
WRAP73 WD repeat containing, antisense to TP73
YPEL5 yippee-like 5 (Drosophila)
ZBTB24 zinc finger and BTB domain containing 24
ZMAT2 zinc finger, matrin-type 2
ZNF354A zinc finger protein 354A
ZNF354B zinc finger protein 354B
ZNF622 zinc finger protein 622

low expression

Symbol Name
MFSD9 major facilitator superfamily domain containing 9