Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JC-06A-11R-A18T-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

430 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-D3-A2JC-06A-11R-A18T-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACTL10 actin-like 10
ADCY5 adenylate cyclase 5
ADGRB1 adhesion G protein-coupled receptor B1
ADGRE1 adhesion G protein-coupled receptor E1
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ALG2 ALG2, alpha-1,3/1,6-mannosyltransferase
ANKRD44 ankyrin repeat domain 44
ANKRD54 ankyrin repeat domain 54
ANO5 anoctamin 5
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
ANP32D acidic (leucine-rich) nuclear phosphoprotein 32 family, member D
ANXA3 annexin A3
APLP2 amyloid beta (A4) precursor-like protein 2
APOBEC3C apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3C
APOBEC3D apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3D
APOBEC3F apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3F
APOBEC3G apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 3G
APOC2 apolipoprotein C-II
APOC4 apolipoprotein C-IV
APOL1 apolipoprotein L, 1
APOL2 apolipoprotein L, 2
AQP12A aquaporin 12A
AQP12B aquaporin 12B
ARFGAP3 ADP-ribosylation factor GTPase activating protein 3
ARHGEF16 Rho guanine nucleotide exchange factor (GEF) 16
ARMCX5 armadillo repeat containing, X-linked 5
ARSJ arylsulfatase family, member J
ASPHD1 aspartate beta-hydroxylase domain containing 1
ATF4 activating transcription factor 4
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
ATP5EP2 ATP synthase, H+ transporting, mitochondrial F1 complex, epsilon subunit pseudogene 2
BAZ2B bromodomain adjacent to zinc finger domain, 2B
BCL2L1 BCL2-like 1
BCL2L10 BCL2-like 10 (apoptosis facilitator)
BDNF brain-derived neurotrophic factor
BET1L Bet1 golgi vesicular membrane trafficking protein-like
BEX2 brain expressed X-linked 2
BHLHE41 basic helix-loop-helix family, member e41
BLVRA biliverdin reductase A
BMP7 bone morphogenetic protein 7
BRCA1 breast cancer 1, early onset
BSX brain-specific homeobox
BTF3P11 basic transcription factor 3 pseudogene 11
C16ORF72 chromosome 16 open reading frame 72
C1ORF177 chromosome 1 open reading frame 177
C22ORF46 chromosome 22 open reading frame 46
C3ORF33 chromosome 3 open reading frame 33
C5ORF38 chromosome 5 open reading frame 38
C8ORF37 chromosome 8 open reading frame 37
C9ORF50 chromosome 9 open reading frame 50
C9ORF91 chromosome 9 open reading frame 91
CA5BP1 carbonic anhydrase VB pseudogene 1
CARS cysteinyl-tRNA synthetase
CASP1 caspase 1, apoptosis-related cysteine peptidase
CBLN1 cerebellin 1 precursor
CBX6 chromobox homolog 6
CBX7 chromobox homolog 7
CCDC114 coiled-coil domain containing 114
CCDC144A coiled-coil domain containing 144A
CCDC160 coiled-coil domain containing 160
CCR10 chemokine (C-C motif) receptor 10
CCR8 chemokine (C-C motif) receptor 8
CCRN4L CCR4 carbon catabolite repression 4-like (S. cerevisiae)
CCT5 chaperonin containing TCP1, subunit 5 (epsilon)
CDCP1 CUB domain containing protein 1
CDK5R1 cyclin-dependent kinase 5, regulatory subunit 1 (p35)
CDK5RAP2 CDK5 regulatory subunit associated protein 2
CEBPB CCAAT/enhancer binding protein (C/EBP), beta
CELA2B chymotrypsin-like elastase family, member 2B
CEP112 centrosomal protein 112kDa
CERS1 ceramide synthase 1
CGB7 chorionic gonadotropin, beta polypeptide 7
CHD6 chromodomain helicase DNA binding protein 6
CHDH choline dehydrogenase
CHM choroideremia (Rab escort protein 1)
CHPT1 choline phosphotransferase 1
CHST11 carbohydrate (chondroitin 4) sulfotransferase 11
CHST6 carbohydrate (N-acetylglucosamine 6-O) sulfotransferase 6
CLCN4 chloride channel, voltage-sensitive 4
CLDN23 claudin 23
CLLU1 chronic lymphocytic leukemia up-regulated 1
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNDP2 CNDP dipeptidase 2 (metallopeptidase M20 family)
CORO2A coronin, actin binding protein, 2A
CRYBA2 crystallin, beta A2
CRYBA4 crystallin, beta A4
CSNK1A1L casein kinase 1, alpha 1-like
CSNK1G3 casein kinase 1, gamma 3
CTAGE1 cutaneous T-cell lymphoma-associated antigen 1
CTPS2 CTP synthase 2
CXORF38 chromosome X open reading frame 38
CYB5D2 cytochrome b5 domain containing 2
CYB5R2 cytochrome b5 reductase 2
CYP2A6 cytochrome P450, family 2, subfamily A, polypeptide 6
CYP4V2 cytochrome P450, family 4, subfamily V, polypeptide 2
DAP death-associated protein
DLG3 discs, large homolog 3 (Drosophila)
DLGAP4 discs, large (Drosophila) homolog-associated protein 4
DNAJC25 DnaJ (Hsp40) homolog, subfamily C , member 25
DNAL4 dynein, axonemal, light chain 4
DTX4 deltex 4, E3 ubiquitin ligase
DUSP4 dual specificity phosphatase 4
DUSP6 dual specificity phosphatase 6
EDARADD EDAR-associated death domain
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EFCAB13 EF-hand calcium binding domain 13
EGR1 early growth response 1
EGR2 early growth response 2
EGR3 early growth response 3
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
EPHX4 epoxide hydrolase 4
EPOR erythropoietin receptor
ERBB4 erb-b2 receptor tyrosine kinase 4
ETNPPL ethanolamine-phosphate phospho-lyase
EYA4 EYA transcriptional coactivator and phosphatase 4
FABP7 fatty acid binding protein 7, brain
FAIM2 Fas apoptotic inhibitory molecule 2
FAM104B family with sequence similarity 104, member B
FAM134B family with sequence similarity 134, member B
FAM173B family with sequence similarity 173, member B
FAM196B family with sequence similarity 196, member B
FAM206A family with sequence similarity 206, member A
FAM43A family with sequence similarity 43, member A
FAM58BP cyclin-related protein FAM58B
FAM78B family with sequence similarity 78, member B
FAM90A7P putative protein FAM90A7
FAM92A1P2 family with sequence similarity 92, member A3
FBXL7 F-box and leucine-rich repeat protein 7
FBXO10 F-box protein 10
FBXO27 F-box protein 27
FGF12 fibroblast growth factor 12
FLJ44635 TPT1-like protein
FOS FBJ murine osteosarcoma viral oncogene homolog
FOXO4 forkhead box O4
FRMPD1 FERM and PDZ domain containing 1
FUNDC2P2 FUN14 domain containing 2 pseudogene 2
FZD1 frizzled class receptor 1
GABARAPL3 GABA(A) receptors associated protein like 3, pseudogene
GALK2 galactokinase 2
GDF15 growth differentiation factor 15
GEMIN8 gem (nuclear organelle) associated protein 8
GFI1B growth factor independent 1B transcription repressor
GJB1 gap junction protein, beta 1, 32kDa
GNA14 guanine nucleotide binding protein (G protein), alpha 14
GNE glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase
GNG10 guanine nucleotide binding protein (G protein), gamma 10
GNPTAB N-acetylglucosamine-1-phosphate transferase, alpha and beta subunits
GOLPH3 golgi phosphoprotein 3 (coat-protein)
GPM6B glycoprotein M6B
GPR135 G protein-coupled receptor 135
GPR157 G protein-coupled receptor 157
GPR27 G protein-coupled receptor 27
GPRASP2 G protein-coupled receptor associated sorting protein 2
GPRC5B G protein-coupled receptor, class C, group 5, member B
GRAMD1A GRAM domain containing 1A
GRAP2 GRB2-related adaptor protein 2
GREM2 gremlin 2, DAN family BMP antagonist
GRIP2 glutamate receptor interacting protein 2
GSN gelsolin
GSPT1 G1 to S phase transition 1
GUCY1B3 guanylate cyclase 1, soluble, beta 3
GYG2 glycogenin 2
HAR1A highly accelerated region 1A (non-protein coding)
HAR1B highly accelerated region 1B (non-protein coding)
HCCS holocytochrome c synthase
HEY1 hes-related family bHLH transcription factor with YRPW motif 1
HIST3H2BB histone cluster 3, H2bb
HOXA13 homeobox A13
HPCA hippocalcin
HPYR1 Helicobacter pylori responsive 1 (non-protein coding)
HSP90B3P heat shock protein 90kDa beta (Grp94), member 3, pseudogene
ICAM1 intercellular adhesion molecule 1
IER2 immediate early response 2
IER5L immediate early response 5-like
IFITM4P interferon induced transmembrane protein 4 pseudogene
IFNL2 interferon, lambda 2
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IL13 interleukin 13
IL33 interleukin 33
INADL InaD-like (Drosophila)
INPP1 inositol polyphosphate-1-phosphatase
INPP5F inositol polyphosphate-5-phosphatase F
IRX1 iroquois homeobox 1
IRX2 iroquois homeobox 2
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
IZUMO4 IZUMO family member 4
JOSD1 Josephin domain containing 1
JUNB jun B proto-oncogene
KAAG1 kidney associated antigen 1
KCNH3 potassium channel, voltage gated eag related subfamily H, member 3
KCNJ12 potassium channel, inwardly rectifying subfamily J, member 12
KCNK1 potassium channel, two pore domain subfamily K, member 1
KCNK15 potassium channel, two pore domain subfamily K, member 15
KCTD14 potassium channel tetramerization domain containing 14
KCTD17 potassium channel tetramerization domain containing 17
KDM5C lysine (K)-specific demethylase 5C
KIAA1804 mixed lineage kinase 4
KIAA2026 KIAA2026
KIF3B kinesin family member 3B
KIF4B kinesin family member 4B
KIR2DL3 killer cell immunoglobulin-like receptor, two domains, long cytoplasmic tail, 3
KIR3DL3 killer cell immunoglobulin-like receptor, three domains, long cytoplasmic tail, 3
KLHDC7A kelch domain containing 7A
LGALS3 lectin, galactoside-binding, soluble, 3
LHFPL3 lipoma HMGIC fusion partner-like 3
LINC00160 long intergenic non-protein coding RNA 160
LITAF lipopolysaccharide-induced TNF factor
LOC100128239 uncharacterized LOC100128239
LOC100130331 POTE ankyrin domain family, member F pseudogene
LOC283332 uncharacterized LOC283332
LOC340017 uncharacterized LOC340017
LOC341056 SUMO1 activating enzyme subunit 1 pseudogene
LOC344967 acyl-CoA thioesterase 7 pseudogene
LOC400043 uncharacterized LOC400043
LOXL4 lysyl oxidase-like 4
LRIG2 leucine-rich repeats and immunoglobulin-like domains 2
LRRC10B leucine rich repeat containing 10B
MAFB v-maf avian musculoaponeurotic fibrosarcoma oncogene homolog B
MAGEB2 melanoma antigen family B2
MAGEH1 melanoma antigen family H1
MALL mal, T-cell differentiation protein-like
MAN1C1 mannosidase, alpha, class 1C, member 1
MAP1B microtubule-associated protein 1B
MAP3K14 mitogen-activated protein kinase kinase kinase 14
MARCH6 membrane-associated ring finger (C3HC4) 6, E3 ubiquitin protein ligase
MCHR1 melanin-concentrating hormone receptor 1
MED9 mediator complex subunit 9
MFSD6 major facilitator superfamily domain containing 6
MID2 midline 2
MIDN midnolin
MIEF1 mitochondrial elongation factor 1
MOAP1 modulator of apoptosis 1
MTMR9LP myotubularin related protein 9-like, pseudogene
MYO1C myosin IC
NAALADL1 N-acetylated alpha-linked acidic dipeptidase-like 1
NANS N-acetylneuraminic acid synthase
NDRG1 N-myc downstream regulated 1
NEUROD1 neuronal differentiation 1
NIN ninein (GSK3B interacting protein)
NIPAL4 NIPA-like domain containing 4
NKX2-8 NK2 homeobox 8
NLRP6 NLR family, pyrin domain containing 6
NME2P1 NME/NM23 nucleoside diphosphate kinase 2 pseudogene 1
NOTCH2NL notch 2 N-terminal like
NPHP4 nephronophthisis 4
NRAP nebulin-related anchoring protein
NSUN2 NOP2/Sun RNA methyltransferase family, member 2
NT5DC3 5'-nucleotidase domain containing 3
OPHN1 oligophrenin 1
OR10K2 olfactory receptor, family 10, subfamily K, member 2
OR2C3 olfactory receptor, family 2, subfamily C, member 3
OR4F15 olfactory receptor, family 4, subfamily F, member 15
OR4F4 olfactory receptor, family 4, subfamily F, member 4
OR51F1 olfactory receptor, family 51, subfamily F, member 1 (gene/pseudogene)
OR56A3 olfactory receptor, family 56, subfamily A, member 3
OSBP oxysterol binding protein
OSER1 oxidative stress responsive serine-rich 1
OSTCP1 oligosaccharyltransferase complex subunit pseudogene 1
OTULIN OTU deubiquitinase with linear linkage specificity
P2RX3 purinergic receptor P2X, ligand gated ion channel, 3
PACSIN2 protein kinase C and casein kinase substrate in neurons 2
PAFAH1B1 platelet-activating factor acetylhydrolase 1b, regulatory subunit 1 (45kDa)
PAGE5 P antigen family, member 5 (prostate associated)
PAPD7 PAP associated domain containing 7
PARP16 poly (ADP-ribose) polymerase family, member 16
PC pyruvate carboxylase
PDE4A phosphodiesterase 4A, cAMP-specific
PDX1 pancreatic and duodenal homeobox 1
PHKA1 phosphorylase kinase, alpha 1 (muscle)
PHLDA1 pleckstrin homology-like domain, family A, member 1
PHTF1 putative homeodomain transcription factor 1
PIN1P1 peptidylprolyl cis/trans isomerase, NIMA-interacting 1 pseudogene 1
PIP5K1P1 phosphatidylinositol-4-phosphate 5-kinase, type I, pseudogene 1
PLA2G16 phospholipase A2, group XVI
PLA2G4C phospholipase A2, group IVC (cytosolic, calcium-independent)
PLEKHB1 pleckstrin homology domain containing, family B (evectins) member 1
PLEKHO2 pleckstrin homology domain containing, family O member 2
PNLDC1 poly(A)-specific ribonuclease (PARN)-like domain containing 1
PNLIPRP3 pancreatic lipase-related protein 3
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PPAP2C phosphatidic acid phosphatase type 2C
PPFIBP2 PTPRF interacting protein, binding protein 2 (liprin beta 2)
PPP1R3D protein phosphatase 1, regulatory subunit 3D
PRELID2 PRELI domain containing 2
PRKACG protein kinase, cAMP-dependent, catalytic, gamma
PRKAR1B protein kinase, cAMP-dependent, regulatory, type I, beta
PRPS1L1 phosphoribosyl pyrophosphate synthetase 1-like 1
PRPS2 phosphoribosyl pyrophosphate synthetase 2
PRSS33 protease, serine, 33
PRSS41 protease, serine, 41
PSCA prostate stem cell antigen
PTTG2 pituitary tumor-transforming 2
PTTG3P pituitary tumor-transforming 3, pseudogene
PYGO1 pygopus family PHD finger 1
RAB27A RAB27A, member RAS oncogene family
RAB9A RAB9A, member RAS oncogene family
RACGAP1P Rac GTPase activating protein 1 pseudogene
RAI1 retinoic acid induced 1
RALB v-ral simian leukemia viral oncogene homolog B
RASD1 RAS, dexamethasone-induced 1
RASEF RAS and EF-hand domain containing
RBBP7 retinoblastoma binding protein 7
RELL1 RELT-like 1
RHPN2 rhophilin, Rho GTPase binding protein 2
RIMBP3 RIMS binding protein 3
RINL Ras and Rab interactor-like
RNF114 ring finger protein 114
ROM1 retinal outer segment membrane protein 1
RPL19P12 ribosomal protein L19 pseudogene 12
RPS19BP1 ribosomal protein S19 binding protein 1
RPS6KA3 ribosomal protein S6 kinase, 90kDa, polypeptide 3
SAMD15 sterile alpha motif domain containing 15
SATL1 spermidine/spermine N1-acetyl transferase-like 1
SCN1B sodium channel, voltage gated, type I beta subunit
SCN9A sodium channel, voltage gated, type IX alpha subunit
SDC3 syndecan 3
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SERTAD3 SERTA domain containing 3
SESTD1 SEC14 and spectrin domains 1
SEZ6L2 seizure related 6 homolog (mouse)-like 2
SH3BP5 SH3-domain binding protein 5 (BTK-associated)
SH3TC1 SH3 domain and tetratricopeptide repeats 1
SHANK1 SH3 and multiple ankyrin repeat domains 1
SHMT1 serine hydroxymethyltransferase 1 (soluble)
SHROOM2 shroom family member 2
SHROOM4 shroom family member 4
SIPA1L2 signal-induced proliferation-associated 1 like 2
SKAP1 src kinase associated phosphoprotein 1
SLC13A3 solute carrier family 13 (sodium-dependent dicarboxylate transporter), member 3
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
SLC2A10 solute carrier family 2 (facilitated glucose transporter), member 10
SLC33A1 solute carrier family 33 (acetyl-CoA transporter), member 1
SLC35F3 solute carrier family 35, member F3
SLC47A1 solute carrier family 47 (multidrug and toxin extrusion), member 1
SLC51B solute carrier family 51, beta subunit
SLFN11 schlafen family member 11
SLFN5 schlafen family member 5
SLITRK2 SLIT and NTRK-like family, member 2
SMARCAL1 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1
SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A
SMUG1 single-strand-selective monofunctional uracil-DNA glycosylase 1
SMYD1 SET and MYND domain containing 1
SNORA16A small nucleolar RNA, H/ACA box 16A
SNX33 sorting nexin 33
SOAT1 sterol O-acyltransferase 1
SOCS3 suppressor of cytokine signaling 3
SOGA3 SOGA family member 3
SPAG1 sperm associated antigen 1
SPATA2 spermatogenesis associated 2
SPIN2B spindlin family, member 2B
SPINK1 serine peptidase inhibitor, Kazal type 1
SPRY1 sprouty homolog 1, antagonist of FGF signaling (Drosophila)
SPSB1 splA/ryanodine receptor domain and SOCS box containing 1
SRC SRC proto-oncogene, non-receptor tyrosine kinase
STAT3 signal transducer and activator of transcription 3 (acute-phase response factor)
STOM stomatin
STS steroid sulfatase (microsomal), isozyme S
SULF2 sulfatase 2
SUN2 Sad1 and UNC84 domain containing 2
SUSD1 sushi domain containing 1
SWAP70 SWAP switching B-cell complex 70kDa subunit
SYAP1 synapse associated protein 1
SYCP2 synaptonemal complex protein 2
SYCP3 synaptonemal complex protein 3
SZT2 seizure threshold 2 homolog (mouse)
TAB1 TGF-beta activated kinase 1/MAP3K7 binding protein 1
TAF1L TAF1 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 210kDa-like
TBC1D3P2 TBC1 domain family, member 3 pseudogene 2
TBC1D9 TBC1 domain family, member 9 (with GRAM domain)
TCEANC transcription elongation factor A (SII) N-terminal and central domain containing
TCTEX1D1 Tctex1 domain containing 1
TFAP2C transcription factor AP-2 gamma (activating enhancer binding protein 2 gamma)
THBS2 thrombospondin 2
THEG theg spermatid protein
TIRAP toll-interleukin 1 receptor (TIR) domain containing adaptor protein
TMC5 transmembrane channel-like 5
TMEM245 transmembrane protein 245
TMEM246 transmembrane protein 246
TMEM255A transmembrane protein 255A
TMEM255B transmembrane protein 255B
TMEM26 transmembrane protein 26
TMTC1 transmembrane and tetratricopeptide repeat containing 1
TOB1 transducer of ERBB2, 1
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TOR3A torsin family 3, member A
TP53BP1 tumor protein p53 binding protein 1
TP53RK TP53 regulating kinase
TP53TG5 TP53 target 5
TPK1 thiamin pyrophosphokinase 1
TRAPPC2 trafficking protein particle complex 2
TRIM47 tripartite motif containing 47
TRPC4AP transient receptor potential cation channel, subfamily C, member 4 associated protein
TSG1 tumor suppressor TSG1
TSHZ2 teashirt zinc finger homeobox 2
TSPAN14 tetraspanin 14
TTI1 TELO2 interacting protein 1
TTR transthyretin
TUBB7P tubulin, beta 7, pseudogene
TUBB8 tubulin, beta 8 class VIII
TUBBP5 tubulin, beta pseudogene 5
TXLNG taxilin gamma
UBA1 ubiquitin-like modifier activating enzyme 1
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
UGCG UDP-glucose ceramide glucosyltransferase
USP11 ubiquitin specific peptidase 11
USP17L2 ubiquitin specific peptidase 17-like family member 2
USP27X ubiquitin specific peptidase 27, X-linked
USP9X ubiquitin specific peptidase 9, X-linked
VANGL1 VANGL planar cell polarity protein 1
WBP11P1 WW domain binding protein 11 pseudogene 1
YPEL4 yippee-like 4 (Drosophila)
ZFYVE16 zinc finger, FYVE domain containing 16
ZIC4 Zic family member 4
ZNF441 zinc finger protein 441
ZNF442 zinc finger protein 442
ZNF536 zinc finger protein 536
ZNF541 zinc finger protein 541
ZNF622 zinc finger protein 622
ZNF630 zinc finger protein 630
ZRSR2 zinc finger (CCCH type), RNA-binding motif and serine/arginine rich 2
ZXDC ZXD family zinc finger C

low expression

Symbol Name
DCTN5 dynactin 5 (p25)
NDUFAB1 NADH dehydrogenase (ubiquinone) 1, alpha/beta subcomplex, 1, 8kDa
PALB2 partner and localizer of BRCA2
POLR3E polymerase (RNA) III (DNA directed) polypeptide E (80kD)
PPP6R2 protein phosphatase 6, regulatory subunit 2
UBFD1 ubiquitin family domain containing 1
WDR92 WD repeat domain 92