Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5EP-01A-12R-A27Q-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

429 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-BF-A5EP-01A-12R-A27Q-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
AATK apoptosis-associated tyrosine kinase
ABHD1 abhydrolase domain containing 1
ABTB2 ankyrin repeat and BTB (POZ) domain containing 2
ACTN4 actinin, alpha 4
ADCY2 adenylate cyclase 2 (brain)
AEN apoptosis enhancing nuclease
AFMID arylformamidase
AGA aspartylglucosaminidase
AGFG1 ArfGAP with FG repeats 1
AHSA1 AHA1, activator of heat shock 90kDa protein ATPase homolog 1 (yeast)
AK7 adenylate kinase 7
AKR7A2P1 aldo-keto reductase family 7, member A2 pseudogene 1
ALG10 ALG10, alpha-1,2-glucosyltransferase
ALG12 ALG12, alpha-1,6-mannosyltransferase
AMMECR1L AMMECR1-like
AMZ2 archaelysin family metallopeptidase 2
AP1S3 adaptor-related protein complex 1, sigma 3 subunit
AP4S1 adaptor-related protein complex 4, sigma 1 subunit
APLP1 amyloid beta (A4) precursor-like protein 1
AREL1 apoptosis resistant E3 ubiquitin protein ligase 1
ARFIP2 ADP-ribosylation factor interacting protein 2
ARL2BP ADP-ribosylation factor-like 2 binding protein
ARSA arylsulfatase A
ASCC2 activating signal cointegrator 1 complex subunit 2
ASPHD1 aspartate beta-hydroxylase domain containing 1
ASPHD2 aspartate beta-hydroxylase domain containing 2
ATAD3B ATPase family, AAA domain containing 3B
ATP6V1E2 ATPase, H+ transporting, lysosomal 31kDa, V1 subunit E2
ATRAID all-trans retinoic acid-induced differentiation factor
B3GNT1
BAG5 BCL2-associated athanogene 5
BIN3 bridging integrator 3
BOLA3 bolA family member 3
BRAF B-Raf proto-oncogene, serine/threonine kinase
BRD1 bromodomain containing 1
BRI3BP BRI3 binding protein
BRSK1 BR serine/threonine kinase 1
BZW1 basic leucine zipper and W2 domains 1
C12ORF43 chromosome 12 open reading frame 43
C12ORF60 chromosome 12 open reading frame 60
C12ORF71 chromosome 12 open reading frame 71
C16ORF70 chromosome 16 open reading frame 70
C17ORF107 chromosome 17 open reading frame 107
C17ORF89 chromosome 17 open reading frame 89
C1ORF109 chromosome 1 open reading frame 109
C1QL1 complement component 1, q subcomponent-like 1
C20ORF166-AS1 C20orf166 antisense RNA 1
C22ORF39 chromosome 22 open reading frame 39
C22ORF42 chromosome 22 open reading frame 42
C2ORF72 chromosome 2 open reading frame 72
C7ORF49 chromosome 7 open reading frame 49
CBX8 chromobox homolog 8
CCDC134 coiled-coil domain containing 134
CCDC36 coiled-coil domain containing 36
CCNK cyclin K
CDK2AP1 cyclin-dependent kinase 2 associated protein 1
CECR7 cat eye syndrome chromosome region, candidate 7 (non-protein coding)
CENPBD1 CENPB DNA-binding domains containing 1
CENPM centromere protein M
CERK ceramide kinase
CETN4P centrin EF-hand protein 4, pseudogene
CGB7 chorionic gonadotropin, beta polypeptide 7
CGREF1 cell growth regulator with EF-hand domain 1
CHAC2 ChaC, cation transport regulator homolog 2 (E. coli)
CHID1 chitinase domain containing 1
CHRNA5 cholinergic receptor, nicotinic, alpha 5 (neuronal)
CIAPIN1 cytokine induced apoptosis inhibitor 1
CKLF chemokine-like factor
CLASP1 cytoplasmic linker associated protein 1
CLCF1 cardiotrophin-like cytokine factor 1
CLEC11A C-type lectin domain family 11, member A
CMBL carboxymethylenebutenolidase homolog (Pseudomonas)
CNEP1R1 CTD nuclear envelope phosphatase 1 regulatory subunit 1
CNIH1 cornichon family AMPA receptor auxiliary protein 1
CNIH3 cornichon family AMPA receptor auxiliary protein 3
CNOT11 CCR4-NOT transcription complex, subunit 11
COPS8 COP9 signalosome subunit 8
COX16 COX16 cytochrome c oxidase assembly homolog (S. cerevisiae)
COX6B2 cytochrome c oxidase subunit VIb polypeptide 2 (testis)
CRCP CGRP receptor component
CRELD2 cysteine-rich with EGF-like domains 2
CRYM-AS1 CRYM antisense RNA 1
CTSG cathepsin G
CTSH cathepsin H
CTU2 cytosolic thiouridylase subunit 2 homolog (S. pombe)
DDOST dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic)
DDT D-dopachrome tautomerase
DDTL D-dopachrome tautomerase-like
DEF8 differentially expressed in FDCP 8 homolog (mouse)
DHODH dihydroorotate dehydrogenase (quinone)
DLL1 delta-like 1 (Drosophila)
DNAJA3 DnaJ (Hsp40) homolog, subfamily A, member 3
DNAJB7 DnaJ (Hsp40) homolog, subfamily B, member 7
DNAJC16 DnaJ (Hsp40) homolog, subfamily C, member 16
DNAJC30 DnaJ (Hsp40) homolog, subfamily C, member 30
DTD2 D-tyrosyl-tRNA deacylase 2 (putative)
DUSP19 dual specificity phosphatase 19
EEF1A2 eukaryotic translation elongation factor 1 alpha 2
EIF1AD eukaryotic translation initiation factor 1A domain containing
EIF3I eukaryotic translation initiation factor 3, subunit I
EIF4H eukaryotic translation initiation factor 4H
EMC1 ER membrane protein complex subunit 1
EMG1 EMG1 N1-specific pseudouridine methyltransferase
ERH enhancer of rudimentary homolog (Drosophila)
ERICH6 glutamate-rich 6
EXOSC6 exosome component 6
EXTL1 exostosin-like glycosyltransferase 1
FAHD1 fumarylacetoacetate hydrolase domain containing 1
FAHD2B fumarylacetoacetate hydrolase domain containing 2B
FAM173B family with sequence similarity 173, member B
FAM19A3 family with sequence similarity 19 (chemokine (C-C motif)-like), member A3
FAM19A5 family with sequence similarity 19 (chemokine (C-C motif)-like), member A5
FAM46A family with sequence similarity 46, member A
FHOD1 formin homology 2 domain containing 1
FKBP10 FK506 binding protein 10, 65 kDa
FKBP2 FK506 binding protein 2, 13kDa
FKBP7 FK506 binding protein 7
FKRP fukutin related protein
FLJ13224 uncharacterized LOC79857
FLJ42627 uncharacterized LOC645644
FNTB farnesyltransferase, CAAX box, beta
FRMD6 FERM domain containing 6
FRMD8 FERM domain containing 8
FXYD3 FXYD domain containing ion transport regulator 3
FZD3 frizzled class receptor 3
G6PC3 glucose 6 phosphatase, catalytic, 3
GALNS galactosamine (N-acetyl)-6-sulfatase
GAPDH glyceraldehyde-3-phosphate dehydrogenase
GDE1 glycerophosphodiester phosphodiesterase 1
GDPGP1 GDP-D-glucose phosphorylase 1
GFOD1 glucose-fructose oxidoreductase domain containing 1
GGCX gamma-glutamyl carboxylase
GLB1L2 galactosidase, beta 1-like 2
GNG13 guanine nucleotide binding protein (G protein), gamma 13
GNPTG N-acetylglucosamine-1-phosphate transferase, gamma subunit
GRAMD4 GRAM domain containing 4
GTSE1-AS1 GTSE1 antisense RNA 1 (head to head)
GUCD1 guanylyl cyclase domain containing 1
GUSB glucuronidase, beta
HBM hemoglobin, mu
HBQ1 hemoglobin, theta 1
HDDC3 HD domain containing 3
HDLBP high density lipoprotein binding protein
HES1 hes family bHLH transcription factor 1
HEXIM1 hexamethylene bis-acetamide inducible 1
HIRA histone cell cycle regulator
HIST1H2AL histone cluster 1, H2al
HK2 hexokinase 2
HM13 histocompatibility (minor) 13
HMGN2P46 high mobility group nucleosomal binding domain 2 pseudogene 46
HOXB7 homeobox B7
HSCB HscB mitochondrial iron-sulfur cluster co-chaperone
HSPE1 heat shock 10kDa protein 1
ICMT isoprenylcysteine carboxyl methyltransferase
IQCC IQ motif containing C
IRF2BPL interferon regulatory factor 2 binding protein-like
ISCA2 iron-sulfur cluster assembly 2
ITPRIPL1 inositol 1,4,5-trisphosphate receptor interacting protein-like 1
ITPRIPL2 inositol 1,4,5-trisphosphate receptor interacting protein-like 2
JKAMP JNK1/MAPK8-associated membrane protein
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KCTD5 potassium channel tetramerization domain containing 5
KDELR3 KDEL (Lys-Asp-Glu-Leu) endoplasmic reticulum protein retention receptor 3
KIF7 kinesin family member 7
KLHL22 kelch-like family member 22
KLLN killin, p53-regulated DNA replication inhibitor
KRTAP21-2 keratin associated protein 21-2
KTN1-AS1 KTN1 antisense RNA 1
LCLAT1 lysocardiolipin acyltransferase 1
LEF1 lymphoid enhancer-binding factor 1
LHX5 LIM homeobox 5
LIMK1 LIM domain kinase 1
LIN7C lin-7 homolog C (C. elegans)
LINC00174 long intergenic non-protein coding RNA 174
LOC100126784 uncharacterized LOC100126784
LOC100132215 uncharacterized LOC100132215
LOC100240734 uncharacterized LOC100240734
LOC143666 uncharacterized LOC143666
LOC151174 uncharacterized LOC151174
LOC493754
LOC652276 potassium channel tetramerization domain containing 5 pseudogene
LOC90834
LSM1 LSM1, U6 small nuclear RNA associated
LSM12 LSM12 homolog (S. cerevisiae)
LURAP1 leucine rich adaptor protein 1
LUZP6 leucine zipper protein 6
LZTS1 leucine zipper, putative tumor suppressor 1
MAP1LC3B microtubule-associated protein 1 light chain 3 beta
MAP1LC3B2 microtubule-associated protein 1 light chain 3 beta 2
MAP3K9 mitogen-activated protein kinase kinase kinase 9
MAPK1IP1L mitogen-activated protein kinase 1 interacting protein 1-like
MAPK8IP1 mitogen-activated protein kinase 8 interacting protein 1
MAPKAPK5 mitogen-activated protein kinase-activated protein kinase 5
MAS1L MAS1 proto-oncogene like, G protein-coupled receptor
MC1R melanocortin 1 receptor (alpha melanocyte stimulating hormone receptor)
MCTP2 multiple C2 domains, transmembrane 2
ME2 malic enzyme 2, NAD(+)-dependent, mitochondrial
MED15 mediator complex subunit 15
MED21 mediator complex subunit 21
MED6 mediator complex subunit 6
MESDC2 mesoderm development candidate 2
MEX3C mex-3 RNA binding family member C
MGC16025 uncharacterized LOC85009
MMACHC methylmalonic aciduria (cobalamin deficiency) cblC type, with homocystinuria
MORC2 MORC family CW-type zinc finger 2
MPG N-methylpurine-DNA glycosylase
MPHOSPH6 M-phase phosphoprotein 6
MPZ myelin protein zero
MREG melanoregulin
MRPL46 mitochondrial ribosomal protein L46
MRPL49 mitochondrial ribosomal protein L49
MRPL51 mitochondrial ribosomal protein L51
MRPS11 mitochondrial ribosomal protein S11
MTFR1L mitochondrial fission regulator 1-like
NAT10 N-acetyltransferase 10 (GCN5-related)
NCK2 NCK adaptor protein 2
NDUFA6 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 6, 14kDa
NEIL2 nei endonuclease VIII-like 2 (E. coli)
NETO2 neuropilin (NRP) and tolloid (TLL)-like 2
NF2 neurofibromin 2 (merlin)
NGRN neugrin, neurite outgrowth associated
NME1 NME/NM23 nucleoside diphosphate kinase 1
NME3 NME/NM23 nucleoside diphosphate kinase 3
NOL9 nucleolar protein 9
NOMO3 NODAL modulator 3
NOTO notochord homeobox
NPAS1 neuronal PAS domain protein 1
NPL N-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)
NPW neuropeptide W
NT5C3B 5'-nucleotidase, cytosolic IIIB
NTRK1 neurotrophic tyrosine kinase, receptor, type 1
NUDT19 nudix (nucleoside diphosphate linked moiety X)-type motif 19
OGFOD1 2-oxoglutarate and iron-dependent oxygenase domain containing 1
OLFM1 olfactomedin 1
ONECUT2 one cut homeobox 2
OR2A14 olfactory receptor, family 2, subfamily A, member 14
OR2D2 olfactory receptor, family 2, subfamily D, member 2
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OSBPL5 oxysterol binding protein-like 5
OSGIN1 oxidative stress induced growth inhibitor 1
P3H3 prolyl 3-hydroxylase 3
P4HB prolyl 4-hydroxylase, beta polypeptide
PAGE2 P antigen family, member 2 (prostate associated)
PAGE2B P antigen family, member 2B
PANX2 pannexin 2
PARK7 parkinson protein 7
PCBP1 poly(rC) binding protein 1
PDIA6 protein disulfide isomerase family A, member 6
PES1 pescadillo ribosomal biogenesis factor 1
PEX10 peroxisomal biogenesis factor 10
PEX11A peroxisomal biogenesis factor 11 alpha
PFKFB4 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase 4
PHF21B PHD finger protein 21B
PHF5A PHD finger protein 5A
PIGV phosphatidylinositol glycan anchor biosynthesis, class V
PIM3 Pim-3 proto-oncogene, serine/threonine kinase
PITPNM2 phosphatidylinositol transfer protein, membrane-associated 2
PKM pyruvate kinase, muscle
PLAT plasminogen activator, tissue
PLEKHA4 pleckstrin homology domain containing, family A (phosphoinositide binding specific) member 4
PLEKHN1 pleckstrin homology domain containing, family N member 1
PLXNB2 plexin B2
PMP2 peripheral myelin protein 2
PNMAL1 paraneoplastic Ma antigen family-like 1
PNPLA4 patatin-like phospholipase domain containing 4
POLR2C polymerase (RNA) II (DNA directed) polypeptide C, 33kDa
POLR2D polymerase (RNA) II (DNA directed) polypeptide D
POLR2L polymerase (RNA) II (DNA directed) polypeptide L, 7.6kDa
POLR3K polymerase (RNA) III (DNA directed) polypeptide K, 12.3 kDa
POM121 POM121 transmembrane nucleoporin
POM121C POM121 transmembrane nucleoporin C
PON2 paraoxonase 2
POP4 processing of precursor 4, ribonuclease P/MRP subunit (S. cerevisiae)
PPCS phosphopantothenoylcysteine synthetase
PPIL6 peptidylprolyl isomerase (cyclophilin)-like 6
PPM1J protein phosphatase, Mg2+/Mn2+ dependent, 1J
PRNP prion protein
PRR34 proline rich 34
PRR35 proline rich 35
PRSS42 protease, serine, 42
PSMC3IP PSMC3 interacting protein
PXN paxillin
PYCR1 pyrroline-5-carboxylate reductase 1
RAB5C RAB5C, member RAS oncogene family
RABGEF1 RAB guanine nucleotide exchange factor (GEF) 1
RAD52 RAD52 homolog (S. cerevisiae)
RAN RAN, member RAS oncogene family
RANBP1 RAN binding protein 1
RBBP8NL RBBP8 N-terminal like
RBX1 ring-box 1, E3 ubiquitin protein ligase
RCCD1 RCC1 domain containing 1
RDH11 retinol dehydrogenase 11 (all-trans/9-cis/11-cis)
RHBDF1 rhomboid 5 homolog 1 (Drosophila)
RHBDL1 rhomboid, veinlet-like 1 (Drosophila)
RNF141 ring finger protein 141
RNF144A ring finger protein 144A
RNF182 ring finger protein 182
RNF208 ring finger protein 208
RNF215 ring finger protein 215
ROM1 retinal outer segment membrane protein 1
RRP7A ribosomal RNA processing 7 homolog A (S. cerevisiae)
RRP7BP ribosomal RNA processing 7 homolog B (S. cerevisiae), pseudogene
RTN3 reticulon 3
RTN4RL2 reticulon 4 receptor-like 2
RWDD2B RWD domain containing 2B
SBDS Shwachman-Bodian-Diamond syndrome
SBDSP1 Shwachman-Bodian-Diamond syndrome pseudogene 1
SBF1 SET binding factor 1
SDC3 syndecan 3
SDF2L1 stromal cell-derived factor 2-like 1
SDF4 stromal cell derived factor 4
SDHAF2 succinate dehydrogenase complex assembly factor 2
SEC11A SEC11 homolog A (S. cerevisiae)
SEC11C SEC11 homolog C (S. cerevisiae)
SEC61A2 Sec61 alpha 2 subunit (S. cerevisiae)
SELO selenoprotein O
SEMA4F sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4F
SERHL serine hydrolase-like (pseudogene)
SH2B3 SH2B adaptor protein 3
SHROOM2 shroom family member 2
SIX6 SIX homeobox 6
SLAMF9 SLAM family member 9
SLC17A9 solute carrier family 17 (vesicular nucleotide transporter), member 9
SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17
SLC25A33 solute carrier family 25 (pyrimidine nucleotide carrier), member 33
SLC2A11 solute carrier family 2 (facilitated glucose transporter), member 11
SLC35A1 solute carrier family 35 (CMP-sialic acid transporter), member A1
SLC35B1 solute carrier family 35, member B1
SLC43A3 solute carrier family 43, member 3
SLC5A2 solute carrier family 5 (sodium/glucose cotransporter), member 2
SLC7A6OS solute carrier family 7, member 6 opposite strand
SLC9A5 solute carrier family 9, subfamily A (NHE5, cation proton antiporter 5), member 5
SNAR-G1 small ILF3/NF90-associated RNA G1
SND1-IT1 SND1 intronic transcript 1
SNORA22 small nucleolar RNA, H/ACA box 22
SNORA31 small nucleolar RNA, H/ACA box 31
SNRNP25 small nuclear ribonucleoprotein 25kDa (U11/U12)
SOGA3 SOGA family member 3
SP9 Sp9 transcription factor
SPATA18 spermatogenesis associated 18
SPATA33 spermatogenesis associated 33
SRSF9 serine/arginine-rich splicing factor 9
SSH1 slingshot protein phosphatase 1
SSR1 signal sequence receptor, alpha
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
ST8SIA1 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 1
STAG3L4 stromal antigen 3-like 4 (pseudogene)
STAMBP STAM binding protein
STARD7 StAR-related lipid transfer (START) domain containing 7
STMN3 stathmin-like 3
STPG2 sperm-tail PG-rich repeat containing 2
STYX serine/threonine/tyrosine interacting protein
STYXL1 serine/threonine/tyrosine interacting-like 1
SYAP1 synapse associated protein 1
SYVN1 synovial apoptosis inhibitor 1, synoviolin
TAF10 TAF10 RNA polymerase II, TATA box binding protein (TBP)-associated factor, 30kDa
TBL2 transducin (beta)-like 2
TGIF1 TGFB-induced factor homeobox 1
TIGAR TP53 induced glycolysis regulatory phosphatase
TIMM10B translocase of inner mitochondrial membrane 10 homolog B (yeast)
TLE3 transducin-like enhancer of split 3
TMCO2 transmembrane and coiled-coil domains 2
TMED10 transmembrane emp24-like trafficking protein 10 (yeast)
TMED2 transmembrane emp24 domain trafficking protein 2
TMED6 transmembrane emp24 protein transport domain containing 6
TMEM147 transmembrane protein 147
TMEM179B transmembrane protein 179B
TMEM182 transmembrane protein 182
TMEM185B transmembrane protein 185B
TMEM194B transmembrane protein 194B
TMEM200B transmembrane protein 200B
TMEM230 transmembrane protein 230
TMEM234 transmembrane protein 234
TMEM241 transmembrane protein 241
TMEM248 transmembrane protein 248
TMEM54 transmembrane protein 54
TMEM60 transmembrane protein 60
TMX2 thioredoxin-related transmembrane protein 2
TNC tenascin C
TNFRSF1A tumor necrosis factor receptor superfamily, member 1A
TOMM22 translocase of outer mitochondrial membrane 22 homolog (yeast)
TP53TG3B TP53 target 3B
TPGS2 tubulin polyglutamylase complex subunit 2
TPI1P2 triosephosphate isomerase 1 pseudogene 2
TPSAB1 tryptase alpha/beta 1
TPSB2 tryptase beta 2 (gene/pseudogene)
TPSD1 tryptase delta 1
TPST1 tyrosylprotein sulfotransferase 1
TRABD TraB domain containing
TRAPPC2 trafficking protein particle complex 2
TRIAP1 TP53 regulated inhibitor of apoptosis 1
TRIM62 tripartite motif containing 62
TRMU tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
TRNP1 TMF1-regulated nuclear protein 1
TSN translin
TXNDC12 thioredoxin domain containing 12 (endoplasmic reticulum)
TXNL4B thioredoxin-like 4B
TXNRD1 thioredoxin reductase 1
TYW1 tRNA-yW synthesizing protein 1 homolog (S. cerevisiae)
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)
UBE2N ubiquitin-conjugating enzyme E2N
UBE3B ubiquitin protein ligase E3B
UFD1L ubiquitin fusion degradation 1 like (yeast)
USB1 U6 snRNA biogenesis 1
USP17L2 ubiquitin specific peptidase 17-like family member 2
VKORC1 vitamin K epoxide reductase complex, subunit 1
VKORC1L1 vitamin K epoxide reductase complex, subunit 1-like 1
VPS37B vacuolar protein sorting 37 homolog B (S. cerevisiae)
WBP11 WW domain binding protein 11
WBSCR22 Williams Beuren syndrome chromosome region 22
WDR12 WD repeat domain 12
WDR61 WD repeat domain 61
WDR92 WD repeat domain 92
XPNPEP3 X-prolyl aminopeptidase 3, mitochondrial
XRCC6 X-ray repair complementing defective repair in Chinese hamster cells 6
YBX1 Y box binding protein 1
YWHAG tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma
ZC3H18 zinc finger CCCH-type containing 18
ZC3HC1 zinc finger, C3HC-type containing 1
ZCCHC17 zinc finger, CCHC domain containing 17
ZDHHC8 zinc finger, DHHC-type containing 8
ZNF410 zinc finger protein 410
ZNF503 zinc finger protein 503
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF70 zinc finger protein 70
ZNF8 zinc finger protein 8
ZNF839 zinc finger protein 839

low expression

Symbol Name
NME6 NME/NM23 nucleoside diphosphate kinase 6
SNX3 sorting nexin 3