Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DN-01A-11R-A20F-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

362 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-BF-A3DN-01A-11R-A20F-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ABHD13 abhydrolase domain containing 13
AEBP1 AE binding protein 1
AKT2 v-akt murine thymoma viral oncogene homolog 2
ALDH7A1 aldehyde dehydrogenase 7 family, member A1
ALPK3 alpha-kinase 3
ANKRD20A4 ankyrin repeat domain 20 family, member A4
ANKRD45 ankyrin repeat domain 45
ANKS1A ankyrin repeat and sterile alpha motif domain containing 1A
APOE apolipoprotein E
APP amyloid beta (A4) precursor protein
AQP4 aquaporin 4
ARHGAP31 Rho GTPase activating protein 31
ARHGAP35 Rho GTPase activating protein 35
ARHGEF7 Rho guanine nucleotide exchange factor (GEF) 7
ARL15 ADP-ribosylation factor-like 15
ATG2B autophagy related 2B
ATP10B ATPase, class V, type 10B
ATP1B1 ATPase, Na+/K+ transporting, beta 1 polypeptide
ATP1B2 ATPase, Na+/K+ transporting, beta 2 polypeptide
ATP1B3 ATPase, Na+/K+ transporting, beta 3 polypeptide
ATP6V1A ATPase, H+ transporting, lysosomal 70kDa, V1 subunit A
ATP8B1 ATPase, aminophospholipid transporter, class I, type 8B, member 1
ATP9B ATPase, class II, type 9B
ATRN attractin
ATRNL1 attractin-like 1
AVPR1A arginine vasopressin receptor 1A
B3GALT1 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 1
B3GNT2 UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2
B4GALT6 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6
BCHE butyrylcholinesterase
BCL2L1 BCL2-like 1
BECN1 beclin 1, autophagy related
BICD1 bicaudal D homolog 1 (Drosophila)
BOC BOC cell adhesion associated, oncogene regulated
BPNT1 3'(2'), 5'-bisphosphate nucleotidase 1
BTD biotinidase
C1ORF141 chromosome 1 open reading frame 141
C1QTNF3 C1q and tumor necrosis factor related protein 3
C22ORF42 chromosome 22 open reading frame 42
C3ORF70 chromosome 3 open reading frame 70
C4ORF19 chromosome 4 open reading frame 19
C5ORF15 chromosome 5 open reading frame 15
CABP5 calcium binding protein 5
CARKD carbohydrate kinase domain containing
CASD1 CAS1 domain containing 1
CAV2 caveolin 2
CBX3 chromobox homolog 3
CC2D1A coiled-coil and C2 domain containing 1A
CD200 CD200 molecule
CDKN2B cyclin-dependent kinase inhibitor 2B (p15, inhibits CDK4)
CEP350 centrosomal protein 350kDa
CEP63 centrosomal protein 63kDa
CER1 cerberus 1, DAN family BMP antagonist
CHL1 cell adhesion molecule L1-like
CHST9 carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 9
CLDN1 claudin 1
CLN5 ceroid-lipofuscinosis, neuronal 5
CLUL1 clusterin-like 1 (retinal)
CNPY4 canopy FGF signaling regulator 4
CNTD2 cyclin N-terminal domain containing 2
CNTN6 contactin 6
COL6A5 collagen, type VI, alpha 5
COMMD10 COMM domain containing 10
CORO2B coronin, actin binding protein, 2B
CPNE5 copine V
CREB5 cAMP responsive element binding protein 5
CRHR2 corticotropin releasing hormone receptor 2
CRYGA crystallin, gamma A
CSPG5 chondroitin sulfate proteoglycan 5 (neuroglycan C)
CXXC5 CXXC finger protein 5
DBI diazepam binding inhibitor (GABA receptor modulator, acyl-CoA binding protein)
DESI2 desumoylating isopeptidase 2
DHFRL1 dihydrofolate reductase-like 1
DIO2 deiodinase, iodothyronine, type II
DISP1 dispatched homolog 1 (Drosophila)
DKFZP434H168 uncharacterized LOC26077
DKFZP434J0226 uncharacterized LOC93429
DKK3 dickkopf WNT signaling pathway inhibitor 3
DNAJB6 DnaJ (Hsp40) homolog, subfamily B, member 6
DNAJC28 DnaJ (Hsp40) homolog, subfamily C, member 28
DNAL1 dynein, axonemal, light chain 1
DOCK10 dedicator of cytokinesis 10
DPY19L2 dpy-19-like 2 (C. elegans)
DPY19L3 dpy-19-like 3 (C. elegans)
DSCR3 Down syndrome critical region 3
DSCR4 Down syndrome critical region 4
DSCR8 Down syndrome critical region 8
EGR1 early growth response 1
EIF2B2 eukaryotic translation initiation factor 2B, subunit 2 beta, 39kDa
ELAC1 elaC ribonuclease Z 1
ELOVL2 ELOVL fatty acid elongase 2
EMX2OS EMX2 opposite strand/antisense RNA
ENAH enabled homolog (Drosophila)
ENOX1 ecto-NOX disulfide-thiol exchanger 1
EPB41L1 erythrocyte membrane protein band 4.1-like 1
EVX2 even-skipped homeobox 2
EXOC4 exocyst complex component 4
FABP7 fatty acid binding protein 7, brain
FAM114A2 family with sequence similarity 114, member A2
FAM13B family with sequence similarity 13, member B
FAM151B family with sequence similarity 151, member B
FAM196B family with sequence similarity 196, member B
FAM198B family with sequence similarity 198, member B
FAM212B family with sequence similarity 212, member B
FAM45B family with sequence similarity 45, member A pseudogene
FARP2 FERM, RhoGEF and pleckstrin domain protein 2
FBXL17 F-box and leucine-rich repeat protein 17
FBXO4 F-box protein 4
FCGR2B Fc fragment of IgG, low affinity IIb, receptor (CD32)
FITM2 fat storage-inducing transmembrane protein 2
FKBP9 FK506 binding protein 9, 63 kDa
FLJ26850 FLJ26850 protein
FOS FBJ murine osteosarcoma viral oncogene homolog
FOSB FBJ murine osteosarcoma viral oncogene homolog B
FRAS1 Fraser extracellular matrix complex subunit 1
FREM1 FRAS1 related extracellular matrix 1
FRMD4B FERM domain containing 4B
FRMD6 FERM domain containing 6
FRRS1L ferric-chelate reductase 1-like
FSTL1 follistatin-like 1
GALNT10 polypeptide N-acetylgalactosaminyltransferase 10
GAREM GRB2 associated, regulator of MAPK1
GFRAL GDNF family receptor alpha like
GLCE glucuronic acid epimerase
GLG1 golgi glycoprotein 1
GPATCH1 G patch domain containing 1
GPR180 G protein-coupled receptor 180
GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like)
GPRC5C G protein-coupled receptor, class C, group 5, member C
GRID1 glutamate receptor, ionotropic, delta 1
GRIK3 glutamate receptor, ionotropic, kainate 3
GSK3B glycogen synthase kinase 3 beta
H2AFV H2A histone family, member V
HDHD2 haloacid dehalogenase-like hydrolase domain containing 2
HFE hemochromatosis
HIBADH 3-hydroxyisobutyrate dehydrogenase
HMCN1 hemicentin 1
HOXA10 homeobox A10
HOXA13 homeobox A13
HOXA6 homeobox A6
HTRA1 HtrA serine peptidase 1
IGIP IgA-inducing protein
IGSF11 immunoglobulin superfamily, member 11
IL1RAP interleukin 1 receptor accessory protein
IL6 interleukin 6
IMPACT impact RWD domain protein
IRGQ immunity-related GTPase family, Q
ITGB3 integrin, beta 3 (platelet glycoprotein IIIa, antigen CD61)
ITSN1 intersectin 1 (SH3 domain protein)
JAZF1 JAZF zinc finger 1
KAT2B K(lysine) acetyltransferase 2B
KATNAL2 katanin p60 subunit A-like 2
KCNE1 potassium channel, voltage gated subfamily E regulatory beta subunit 1
KCNG3 potassium channel, voltage gated modifier subfamily G, member 3
KCNIP1 Kv channel interacting protein 1
KCNIP4-IT1 KCNIP4 intronic transcript 1
KCNJ10 potassium channel, inwardly rectifying subfamily J, member 10
KCNJ9 potassium channel, inwardly rectifying subfamily J, member 9
KCTD1 potassium channel tetramerization domain containing 1
KCTD20 potassium channel tetramerization domain containing 20
KIAA0355 KIAA0355
KIAA1715 KIAA1715
KIF13A kinesin family member 13A
KIF3A kinesin family member 3A
KIF5C kinesin family member 5C
KIRREL kin of IRRE like (Drosophila)
KLHL20 kelch-like family member 20
LGI4 leucine-rich repeat LGI family, member 4
LHFPL3 lipoma HMGIC fusion partner-like 3
LIG4 ligase IV, DNA, ATP-dependent
LIMCH1 LIM and calponin homology domains 1
LINGO2 leucine rich repeat and Ig domain containing 2
LIPG lipase, endothelial
LMO7 LIM domain 7
LOC100131691
LOC100134868 uncharacterized LOC100134868
LOC401463 uncharacterized LOC401463
LOXL4 lysyl oxidase-like 4
LSM14A LSM14A, SCD6 homolog A (S. cerevisiae)
MBNL2 muscleblind-like splicing regulator 2
MCAM melanoma cell adhesion molecule
MFAP3 microfibrillar-associated protein 3
MFAP3L microfibrillar-associated protein 3-like
MFSD6 major facilitator superfamily domain containing 6
MKRN1 makorin ring finger protein 1
MMP27 matrix metallopeptidase 27
MPP5 membrane protein, palmitoylated 5 (MAGUK p55 subfamily member 5)
MR1 major histocompatibility complex, class I-related
MREG melanoregulin
MRO maestro
MSX2 msh homeobox 2
MYCBP2 MYC binding protein 2, E3 ubiquitin protein ligase
MYO5B myosin VB
N6AMT1 N-6 adenine-specific DNA methyltransferase 1 (putative)
NAALADL2 N-acetylated alpha-linked acidic dipeptidase-like 2
NANOS1 nanos homolog 1 (Drosophila)
NAPEPLD N-acyl phosphatidylethanolamine phospholipase D
NBPF3 neuroblastoma breakpoint family, member 3
NCR1 natural cytotoxicity triggering receptor 1
NEK7 NIMA-related kinase 7
NELL1 NEL-like 1 (chicken)
NFE2L2 nuclear factor, erythroid 2-like 2
NFIA nuclear factor I/A
NIN ninein (GSK3B interacting protein)
NLGN1 neuroligin 1
NOMO2 NODAL modulator 2
NPFFR1 neuropeptide FF receptor 1
NPPB natriuretic peptide B
NPR2 natriuretic peptide receptor 2
NTN4 netrin 4
NXT2 nuclear transport factor 2-like export factor 2
OLFM3 olfactomedin 3
OMG oligodendrocyte myelin glycoprotein
OPA3 optic atrophy 3 (autosomal recessive, with chorea and spastic paraplegia)
OR1G1 olfactory receptor, family 1, subfamily G, member 1
OR2B2 olfactory receptor, family 2, subfamily B, member 2
OR51E1 olfactory receptor, family 51, subfamily E, member 1
OR52I1 olfactory receptor, family 52, subfamily I, member 1
OSBPL1A oxysterol binding protein-like 1A
PBOV1 prostate and breast cancer overexpressed 1
PCDHGA11 protocadherin gamma subfamily A, 11
PCDHGA9 protocadherin gamma subfamily A, 9
PCDHGC3 protocadherin gamma subfamily C, 3
PDE3B phosphodiesterase 3B, cGMP-inhibited
PDGFA platelet-derived growth factor alpha polypeptide
PDGFD platelet derived growth factor D
PGF placental growth factor
PHACTR2 phosphatase and actin regulator 2
PHLPP1 PH domain and leucine rich repeat protein phosphatase 1
PIAS2 protein inhibitor of activated STAT, 2
PIGK phosphatidylinositol glycan anchor biosynthesis, class K
PIGN phosphatidylinositol glycan anchor biosynthesis, class N
PIK3C2A phosphatidylinositol-4-phosphate 3-kinase, catalytic subunit type 2 alpha
PIP5K1B phosphatidylinositol-4-phosphate 5-kinase, type I, beta
PLSCR4 phospholipid scramblase 4
POSTN periostin, osteoblast specific factor
POU3F3 POU class 3 homeobox 3
PPP1R12B protein phosphatase 1, regulatory subunit 12B
PPP2R2B protein phosphatase 2, regulatory subunit B, beta
PRCP prolylcarboxypeptidase (angiotensinase C)
PRELID2 PRELI domain containing 2
PROS1 protein S (alpha)
PTGFRN prostaglandin F2 receptor inhibitor
PTPN14 protein tyrosine phosphatase, non-receptor type 14
PTPRG protein tyrosine phosphatase, receptor type, G
PTPRM protein tyrosine phosphatase, receptor type, M
PTPRZ1 protein tyrosine phosphatase, receptor-type, Z polypeptide 1
RAB43 RAB43, member RAS oncogene family
RALB v-ral simian leukemia viral oncogene homolog B
RAMP3 receptor (G protein-coupled) activity modifying protein 3
RASA3 RAS p21 protein activator 3
RBM43 RNA binding motif protein 43
RDH12 retinol dehydrogenase 12 (all-trans/9-cis/11-cis)
RECK reversion-inducing-cysteine-rich protein with kazal motifs
RGS4 regulator of G-protein signaling 4
RHOJ ras homolog family member J
RIT1 Ras-like without CAAX 1
RNASEL ribonuclease L (2',5'-oligoisoadenylate synthetase-dependent)
ROCK2 Rho-associated, coiled-coil containing protein kinase 2
ROPN1 rhophilin associated tail protein 1
RPL31P11 ribosomal protein L31 pseudogene 11
RSPRY1 ring finger and SPRY domain containing 1
RTN4RL1 reticulon 4 receptor-like 1
SAA3P serum amyloid A3 pseudogene
SAMD4A sterile alpha motif domain containing 4A
SCD5 stearoyl-CoA desaturase 5
SCN1B sodium channel, voltage gated, type I beta subunit
SCN4B sodium channel, voltage gated, type IV beta subunit
SDC2 syndecan 2
SELE selectin E
SEMA3D sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3D
SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A
SEPT8 septin 8
SERINC5 serine incorporator 5
SGCD sarcoglycan, delta (35kDa dystrophin-associated glycoprotein)
SGCE sarcoglycan, epsilon
SLC16A1 solute carrier family 16 (monocarboxylate transporter), member 1
SLC25A20 solute carrier family 25 (carnitine/acylcarnitine translocase), member 20
SLC35A5 solute carrier family 35, member A5
SLC35B4 solute carrier family 35 (UDP-xylose/UDP-N-acetylglucosamine transporter), member B4
SLC37A3 solute carrier family 37, member 3
SLC6A20 solute carrier family 6 (proline IMINO transporter), member 20
SMAD2 SMAD family member 2
SMAD5-AS1 SMAD5 antisense RNA 1
SMAD7 SMAD family member 7
SMPDL3A sphingomyelin phosphodiesterase, acid-like 3A
SNTB2 syntrophin, beta 2 (dystrophin-associated protein A1, 59kDa, basic component 2)
SNX10 sorting nexin 10
SORCS1 sortilin-related VPS10 domain containing receptor 1
SORL1 sortilin-related receptor, L(DLR class) A repeats containing
SP6 Sp6 transcription factor
SPAG6 sperm associated antigen 6
SPARC secreted protein, acidic, cysteine-rich (osteonectin)
SPATA18 spermatogenesis associated 18
SPIRE1 spire-type actin nucleation factor 1
SPRY2 sprouty homolog 2 (Drosophila)
SPRY4 sprouty homolog 4 (Drosophila)
SS18 synovial sarcoma translocation, chromosome 18
ST3GAL2 ST3 beta-galactoside alpha-2,3-sialyltransferase 2
ST6GAL1 ST6 beta-galactosamide alpha-2,6-sialyltranferase 1
ST6GALNAC3 ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 3
STAG3L4 stromal antigen 3-like 4 (pseudogene)
STK32A serine/threonine kinase 32A
STMN2 stathmin 2
STOX1 storkhead box 1
SUCO SUN domain containing ossification factor
SUSD1 sushi domain containing 1
SVIL supervillin
SWAP70 SWAP switching B-cell complex 70kDa subunit
TANGO6 transport and golgi organization 6 homolog (Drosophila)
TEAD1 TEA domain family member 1 (SV40 transcriptional enhancer factor)
TGFBR3 transforming growth factor, beta receptor III
TGOLN2 trans-golgi network protein 2
TIAM1 T-cell lymphoma invasion and metastasis 1
TM4SF18 transmembrane 4 L six family member 18
TM7SF3 transmembrane 7 superfamily member 3
TMCO3 transmembrane and coiled-coil domains 3
TMEM168 transmembrane protein 168
TMEM229B transmembrane protein 229B
TMEM26 transmembrane protein 26
TMX4 thioredoxin-related transmembrane protein 4
TOR1AIP1 torsin A interacting protein 1
TRAK1 trafficking protein, kinesin binding 1
TRAPPC8 trafficking protein particle complex 8
TRIM9 tripartite motif containing 9
TRPM4 transient receptor potential cation channel, subfamily M, member 4
TSC22D4 TSC22 domain family, member 4
TTLL6 tubulin tyrosine ligase-like family member 6
TYW1B tRNA-yW synthesizing protein 1 homolog B (S. cerevisiae)
UBE2H ubiquitin-conjugating enzyme E2H
URI1 URI1, prefoldin-like chaperone
VPS41 vacuolar protein sorting 41 homolog (S. cerevisiae)
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
VSTM2L V-set and transmembrane domain containing 2 like
WDR7 WD repeat domain 7
WISP1 WNT1 inducible signaling pathway protein 1
WSCD1 WSC domain containing 1
XYLT1 xylosyltransferase I
ZC3H7A zinc finger CCCH-type containing 7A
ZFHX3 zinc finger homeobox 3
ZIC1 Zic family member 1
ZIC4 Zic family member 4
ZKSCAN1 zinc finger with KRAB and SCAN domains 1
ZMAT2 zinc finger, matrin-type 2
ZMAT3 zinc finger, matrin-type 3
ZNF17 zinc finger protein 17
ZNF221 zinc finger protein 221
ZNF223 zinc finger protein 223
ZNF225 zinc finger protein 225
ZNF271P zinc finger protein 271, pseudogene
ZNF30 zinc finger protein 30
ZNF35 zinc finger protein 35
ZNF396 zinc finger protein 396
ZNF462 zinc finger protein 462
ZNF483 zinc finger protein 483
ZNF503-AS2 ZNF503 antisense RNA 2
ZNF576 zinc finger protein 576
ZNF599 zinc finger protein 599
ZNF608 zinc finger protein 608
ZSWIM5 zinc finger, SWIM-type containing 5

low expression

Symbol Name
ANKLE2 ankyrin repeat and LEM domain containing 2
FBXO31 F-box protein 31