Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PV-01A-11R-A18U-07 Gene Set

Dataset TCGA Signatures of Differentially Expressed Genes for Tumors
Category transcriptomics
Type tissue sample
Description tissue sample derived from Skin Cutaneous Melanoma_SKCM (The Cancer Genome Atlas)
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Genes

317 genes with high or low expression in Skin Cutaneous Melanoma_SKCM_TCGA-BF-A1PV-01A-11R-A18U-07 relative to other tissue samples from the TCGA Signatures of Differentially Expressed Genes for Tumors dataset.

high expression

Symbol Name
ACAA2 acetyl-CoA acyltransferase 2
ADAM9 ADAM metallopeptidase domain 9
ADK adenosine kinase
ADORA2B adenosine A2b receptor
AGPAT5 1-acylglycerol-3-phosphate O-acyltransferase 5
ALDH18A1 aldehyde dehydrogenase 18 family, member A1
ALS2CR11 amyotrophic lateral sclerosis 2 (juvenile) chromosome region, candidate 11
AMOTL2 angiomotin like 2
ANKS1B ankyrin repeat and sterile alpha motif domain containing 1B
ANO6 anoctamin 6
ANP32C acidic (leucine-rich) nuclear phosphoprotein 32 family, member C
ANXA2P1 annexin A2 pseudogene 1
ANXA2P3 annexin A2 pseudogene 3
APBB2 amyloid beta (A4) precursor protein-binding, family B, member 2
ARHGAP12 Rho GTPase activating protein 12
ARHGEF10 Rho guanine nucleotide exchange factor (GEF) 10
ARHGEF12 Rho guanine nucleotide exchange factor (GEF) 12
ARMC1 armadillo repeat containing 1
ASAP1 ArfGAP with SH3 domain, ankyrin repeat and PH domain 1
ASH2L ash2 (absent, small, or homeotic)-like (Drosophila)
ATP6V1B2 ATPase, H+ transporting, lysosomal 56/58kDa, V1 subunit B2
ATP7A ATPase, Cu++ transporting, alpha polypeptide
B3GALT2 UDP-Gal:betaGlcNAc beta 1,3-galactosyltransferase, polypeptide 2
B4GALNT4 beta-1,4-N-acetyl-galactosaminyl transferase 4
BAG4 BCL2-associated athanogene 4
BBS12 Bardet-Biedl syndrome 12
BBS7 Bardet-Biedl syndrome 7
BMP1 bone morphogenetic protein 1
BNIP3L BCL2/adenovirus E1B 19kDa interacting protein 3-like
BPHL biphenyl hydrolase-like (serine hydrolase)
BRF2 BRF2, RNA polymerase III transcription initiation factor 50 kDa subunit
BST1 bone marrow stromal cell antigen 1
C10ORF91 chromosome 10 open reading frame 91
C11ORF52 chromosome 11 open reading frame 52
C18ORF25 chromosome 18 open reading frame 25
C2ORF88 chromosome 2 open reading frame 88
C8ORF46 chromosome 8 open reading frame 46
C8ORF58 chromosome 8 open reading frame 58
CA5B carbonic anhydrase VB, mitochondrial
CADM3 cell adhesion molecule 3
CCDC25 coiled-coil domain containing 25
CCDC36 coiled-coil domain containing 36
CDCA2 cell division cycle associated 2
CDK15 cyclin-dependent kinase 15
CDKL1 cyclin-dependent kinase-like 1 (CDC2-related kinase)
CFAP97 cilia and flagella associated protein 97
CHRAC1 chromatin accessibility complex 1
CHRM1 cholinergic receptor, muscarinic 1
CHSY3 chondroitin sulfate synthase 3
CNNM1 cyclin and CBS domain divalent metal cation transport mediator 1
CNOT7 CCR4-NOT transcription complex, subunit 7
CNTF ciliary neurotrophic factor
CNTNAP1 contactin associated protein 1
CPNE7 copine VII
CPSF1 cleavage and polyadenylation specific factor 1, 160kDa
CRYM-AS1 CRYM antisense RNA 1
CSNK1A1L casein kinase 1, alpha 1-like
CSPP1 centrosome and spindle pole associated protein 1
CYBRD1 cytochrome b reductase 1
CYP2U1 cytochrome P450, family 2, subfamily U, polypeptide 1
DCDC2B doublecortin domain containing 2B
DCTN6 dynactin 6
DDHD2 DDHD domain containing 2
DEFB134 defensin, beta 134
DHFRL1 dihydrofolate reductase-like 1
DKFZP434H168 uncharacterized LOC26077
DOCK5 dedicator of cytokinesis 5
DPY19L2P2 DPY19L2 pseudogene 2
DPY19L4 dpy-19-like 4 (C. elegans)
DRAM1 DNA-damage regulated autophagy modulator 1
DTWD1 DTW domain containing 1
EHD2 EH-domain containing 2
EHHADH enoyl-CoA, hydratase/3-hydroxyacyl CoA dehydrogenase
EIF3IP1 eukaryotic translation initiation factor 3, subunit I pseudogene 1
ELP3 elongator acetyltransferase complex subunit 3
EMX2 empty spiracles homeobox 2
EMX2OS EMX2 opposite strand/antisense RNA
ENTPD4 ectonucleoside triphosphate diphosphohydrolase 4
ENTPD7 ectonucleoside triphosphate diphosphohydrolase 7
EPB41L3 erythrocyte membrane protein band 4.1-like 3
ERI1 exoribonuclease 1
ESCO2 establishment of sister chromatid cohesion N-acetyltransferase 2
ESRP1 epithelial splicing regulatory protein 1
EXTL3 exostosin-like glycosyltransferase 3
F2R coagulation factor II (thrombin) receptor
FAM126A family with sequence similarity 126, member A
FAM182B family with sequence similarity 182, member B
FAM198B family with sequence similarity 198, member B
FAM66A family with sequence similarity 66, member A
FAM86B1 family with sequence similarity 86, member B1
FDFT1 farnesyl-diphosphate farnesyltransferase 1
FECH ferrochelatase
FHDC1 FH2 domain containing 1
FN1 fibronectin 1
FNTA farnesyltransferase, CAAX box, alpha
FOXR1 forkhead box R1
FUT10 fucosyltransferase 10 (alpha (1,3) fucosyltransferase)
FZD2 frizzled class receptor 2
FZD3 frizzled class receptor 3
GABRB3 gamma-aminobutyric acid (GABA) A receptor, beta 3
GAN gigaxonin
GAS2L3 growth arrest-specific 2 like 3
GCNT2 glucosaminyl (N-acetyl) transferase 2, I-branching enzyme (I blood group)
GINS4 GINS complex subunit 4 (Sld5 homolog)
GIPC3 GIPC PDZ domain containing family, member 3
GJC1 gap junction protein, gamma 1, 45kDa
GNG2 guanine nucleotide binding protein (G protein), gamma 2
GSR glutathione reductase
GTF2E2 general transcription factor IIE, polypeptide 2, beta 34kDa
GULP1 GULP, engulfment adaptor PTB domain containing 1
HAAO 3-hydroxyanthranilate 3,4-dioxygenase
HACD1 3-hydroxyacyl-CoA dehydratase 1
HGSNAT heparan-alpha-glucosaminide N-acetyltransferase
HIST1H2AH histone cluster 1, H2ah
HIST1H2BD histone cluster 1, H2bd
HIST1H2BF histone cluster 1, H2bf
HIST1H2BO histone cluster 1, H2bo
HIST1H3D histone cluster 1, H3d
HIST1H3G histone cluster 1, H3g
HIST1H3H histone cluster 1, H3h
HIST1H4E histone cluster 1, H4e
HIST1H4H histone cluster 1, H4h
HIST1H4K histone cluster 1, H4k
HMBOX1 homeobox containing 1
HMGB3P1 high mobility group box 3 pseudogene 1
HSP90AB2P heat shock protein 90kDa alpha (cytosolic), class B member 2, pseudogene
HTR2B 5-hydroxytryptamine (serotonin) receptor 2B, G protein-coupled
IGBP1P1 immunoglobulin (CD79A) binding protein 1 pseudogene 1
IKBKB inhibitor of kappa light polypeptide gene enhancer in B-cells, kinase beta
INTS10 integrator complex subunit 10
INTS9 integrator complex subunit 9
IRX5 iroquois homeobox 5
KCND1 potassium channel, voltage gated Shal related subfamily D, member 1
KCNH4 potassium channel, voltage gated eag related subfamily H, member 4
KCNN2 potassium channel, calcium activated intermediate/small conductance subfamily N alpha, member 2
KCTD1 potassium channel tetramerization domain containing 1
KCTD4 potassium channel tetramerization domain containing 4
KCTD9 potassium channel tetramerization domain containing 9
KDM1B lysine (K)-specific demethylase 1B
KIAA0196 KIAA0196
KIAA1328 KIAA1328
KIDINS220 kinase D-interacting substrate, 220kDa
KIF13A kinesin family member 13A
KLF13 Kruppel-like factor 13
LATS2 large tumor suppressor kinase 2
LEPROT leptin receptor overlapping transcript
LIMA1 LIM domain and actin binding 1
LOC100131496 uncharacterized LOC100131496
LOC728024 chromosome X open reading frame 56 pseudogene
LOX lysyl oxidase
LRRC56 leucine rich repeat containing 56
LRRFIP2 leucine rich repeat (in FLII) interacting protein 2
LURAP1L leucine rich adaptor protein 1-like
LY6G6E lymphocyte antigen 6 complex, locus G6E (pseudogene)
LY6K lymphocyte antigen 6 complex, locus K
MAK16 MAK16 homolog (S. cerevisiae)
MAL mal, T-cell differentiation protein
MAN2A1 mannosidase, alpha, class 2A, member 1
MARVELD1 MARVEL domain containing 1
MATN2 matrilin 2
MBLAC2 metallo-beta-lactamase domain containing 2
MCPH1 microcephalin 1
MGAT2 mannosyl (alpha-1,6-)-glycoprotein beta-1,2-N-acetylglucosaminyltransferase
MIB1 mindbomb E3 ubiquitin protein ligase 1
MME membrane metallo-endopeptidase
MTMR9 myotubularin related protein 9
MYBL1 v-myb avian myeloblastosis viral oncogene homolog-like 1
MYPN myopalladin
NBN nibrin
NDUFAF6 NADH dehydrogenase (ubiquinone) complex I, assembly factor 6
NEIL2 nei endonuclease VIII-like 2 (E. coli)
NFATC1 nuclear factor of activated T-cells, cytoplasmic, calcineurin-dependent 1
NHLRC2 NHL repeat containing 2
NKX2-2 NK2 homeobox 2
NLGN1 neuroligin 1
NLN neurolysin (metallopeptidase M3 family)
NPAS4 neuronal PAS domain protein 4
OLFML2A olfactomedin-like 2A
OR7D2 olfactory receptor, family 7, subfamily D, member 2
OSBPL1A oxysterol binding protein-like 1A
OXSR1 oxidative stress responsive 1
PABPC1P2 poly(A) binding protein, cytoplasmic 1 pseudogene 2
PABPC3 poly(A) binding protein, cytoplasmic 3
PAG1 phosphoprotein membrane anchor with glycosphingolipid microdomains 1
PARD6G par-6 family cell polarity regulator gamma
PBK PDZ binding kinase
PCDHGA10 protocadherin gamma subfamily A, 10
PCDHGA3 protocadherin gamma subfamily A, 3
PCDHGA5 protocadherin gamma subfamily A, 5
PDE6C phosphodiesterase 6C, cGMP-specific, cone, alpha prime
PDLIM7 PDZ and LIM domain 7 (enigma)
PDP1 pyruvate dehyrogenase phosphatase catalytic subunit 1
PGBD3 piggyBac transposable element derived 3
PIGN phosphatidylinositol glycan anchor biosynthesis, class N
PLAT plasminogen activator, tissue
PLEKHF2 pleckstrin homology domain containing, family F (with FYVE domain) member 2
PLOD2 procollagen-lysine, 2-oxoglutarate 5-dioxygenase 2
PMP22 peripheral myelin protein 22
POLI polymerase (DNA directed) iota
POLR3D polymerase (RNA) III (DNA directed) polypeptide D, 44kDa
POLR3G polymerase (RNA) III (DNA directed) polypeptide G (32kD)
POMK protein-O-mannose kinase
POTEE POTE ankyrin domain family, member E
POTEF POTE ankyrin domain family, member F
POTEM POTE ankyrin domain family, member M
PP2D1 protein phosphatase 2C-like domain containing 1
PPP1CC protein phosphatase 1, catalytic subunit, gamma isozyme
PPP2CB protein phosphatase 2, catalytic subunit, beta isozyme
PPP2R2A protein phosphatase 2, regulatory subunit B, alpha
PPP2R3A protein phosphatase 2, regulatory subunit B'', alpha
PPP3CC protein phosphatase 3, catalytic subunit, gamma isozyme
PPP4R1 protein phosphatase 4, regulatory subunit 1
PROS1 protein S (alpha)
PSORS1C3 psoriasis susceptibility 1 candidate 3 (non-protein coding)
PTPRF protein tyrosine phosphatase, receptor type, F
PWWP2A PWWP domain containing 2A
RAB11FIP2 RAB11 family interacting protein 2 (class I)
RAD54B RAD54 homolog B (S. cerevisiae)
RAG1 recombination activating gene 1
RALBP1 ralA binding protein 1
RASSF1 Ras association (RalGDS/AF-6) domain family member 1
RBBP8 retinoblastoma binding protein 8
RBFA ribosome binding factor A (putative)
RBM12B-AS1 RBM12B antisense RNA 1
RBPMS RNA binding protein with multiple splicing
REEP3 receptor accessory protein 3
REXO2 RNA exonuclease 2
RHOB ras homolog family member B
RHOBTB1 Rho-related BTB domain containing 1
RHOJ ras homolog family member J
RMDN1 regulator of microtubule dynamics 1
RNF125 ring finger protein 125, E3 ubiquitin protein ligase
RNF139 ring finger protein 139
RNF170 ring finger protein 170
ROBO2 roundabout, axon guidance receptor, homolog 2 (Drosophila)
RPL19P12 ribosomal protein L19 pseudogene 12
RPL23AP53 ribosomal protein L23a pseudogene 53
RPRD1A regulation of nuclear pre-mRNA domain containing 1A
SALL3 spalt-like transcription factor 3
SARM1 sterile alpha and TIR motif containing 1
SCN8A sodium channel, voltage gated, type VIII alpha subunit
SIDT2 SID1 transmembrane family, member 2
SIGIRR single immunoglobulin and toll-interleukin 1 receptor (TIR) domain
SLC35G1 solute carrier family 35, member G1
SLFN12 schlafen family member 12
SLITRK5 SLIT and NTRK-like family, member 5
SMAD2 SMAD family member 2
SNAI2 snail family zinc finger 2
SNORA41 small nucleolar RNA, H/ACA box 41
SNORA75 small nucleolar RNA, H/ACA box 75
SNX25 sorting nexin 25
SNX32 sorting nexin 32
SOAT2 sterol O-acyltransferase 2
SOCS6 suppressor of cytokine signaling 6
SORBS3 sorbin and SH3 domain containing 3
SORD sorbitol dehydrogenase
SPTLC2 serine palmitoyltransferase, long chain base subunit 2
SRFBP1 serum response factor binding protein 1
ST8SIA6 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6
STAM signal transducing adaptor molecule (SH3 domain and ITAM motif) 1
STARD6 StAR-related lipid transfer (START) domain containing 6
SYTL2 synaptotagmin-like 2
TAF4B TAF4b RNA polymerase II, TATA box binding protein (TBP)-associated factor, 105kDa
TBC1D31 TBC1 domain family, member 31
TGFB1I1 transforming growth factor beta 1 induced transcript 1
TGS1 trimethylguanosine synthase 1
THEM6 thioesterase superfamily member 6
TM2D2 TM2 domain containing 2
TMEM132A transmembrane protein 132A
TMEM240 transmembrane protein 240
TMEM241 transmembrane protein 241
TMEM64 transmembrane protein 64
TNKS tankyrase, TRF1-interacting ankyrin-related ADP-ribose polymerase
TPGS2 tubulin polyglutamylase complex subunit 2
TPM1 tropomyosin 1 (alpha)
TPMT thiopurine S-methyltransferase
TRAK1 trafficking protein, kinesin binding 1
TRAM2 translocation associated membrane protein 2
TRIM32 tripartite motif containing 32
TRIM35 tripartite motif containing 35
TRIM7 tripartite motif containing 7
TYMS thymidylate synthetase
TYMSOS TYMS opposite strand
UBE2NL ubiquitin-conjugating enzyme E2N-like (gene/pseudogene)
VDAC3 voltage-dependent anion channel 3
VPS37A vacuolar protein sorting 37 homolog A (S. cerevisiae)
VPS4B vacuolar protein sorting 4 homolog B (S. cerevisiae)
VTN vitronectin
WHSC1L1 Wolf-Hirschhorn syndrome candidate 1-like 1
WRN Werner syndrome, RecQ helicase-like
XKR5 XK, Kell blood group complex subunit-related family, member 5
XPO7 exportin 7
YBX3P1 Y box binding protein 3 pseudogene 1
ZBED3 zinc finger, BED-type containing 3
ZC3H12C zinc finger CCCH-type containing 12C
ZFP30 ZFP30 zinc finger protein
ZHX1 zinc fingers and homeoboxes 1
ZNF114 zinc finger protein 114
ZNF236 zinc finger protein 236
ZNF24 zinc finger protein 24
ZNF250 zinc finger protein 250
ZNF260 zinc finger protein 260
ZNF37A zinc finger protein 37A
ZNF382 zinc finger protein 382
ZNF391 zinc finger protein 391
ZNF440 zinc finger protein 440
ZNF471 zinc finger protein 471
ZNF491 zinc finger protein 491
ZNF532 zinc finger protein 532
ZNF667 zinc finger protein 667
ZNF702P zinc finger protein 702, pseudogene
ZNF781 zinc finger protein 781
ZNF788 zinc finger family member 788
ZNF793 zinc finger protein 793
ZSCAN30 zinc finger and SCAN domain containing 30

low expression

Symbol Name
CD47 CD47 molecule
TRA2A transformer 2 alpha homolog (Drosophila)